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Items: 50

1.

Microfluidic droplet liquid reactors for active pharmaceutical ingredient crystallization by diffusion controlled solvent extraction.

Tona RM, McDonald TAO, Akhavein N, Larkin JD, Lai D.

Lab Chip. 2019 Jun 11;19(12):2127-2137. doi: 10.1039/c9lc00204a.

PMID:
31114833
2.

Modeling Boronic Acid Based Fluorescent Saccharide Sensors: Computational Investigation of d-Fructose Binding to Dimethylaminomethylphenylboronic Acid.

Kearns FL, Robart C, Kemp MT, Vankayala SL, Chapin BM, Anslyn EV, Woodcock HL, Larkin JD.

J Chem Inf Model. 2019 May 28;59(5):2150-2158. doi: 10.1021/acs.jcim.8b00987. Epub 2019 Apr 22.

PMID:
30908030
3.

Monosubstituted Phenylboronic Acids, R-B(OH)2 (R = C6H5, C6H4CH3, C6H4NH2, C6H4OH, and C6H4F): A Computational Investigation.

Rao NZ, Larkin JD, Bock CW.

Struct Chem. 2017 Aug;28(4):945-955. doi: 10.1007/s11224-016-0897-4. Epub 2016 Dec 15.

4.

Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines.

Steinmetz NA, Buetfering C, Lecoq J, Lee CR, Peters AJ, Jacobs EAK, Coen P, Ollerenshaw DR, Valley MT, de Vries SEJ, Garrett M, Zhuang J, Groblewski PA, Manavi S, Miles J, White C, Lee E, Griffin F, Larkin JD, Roll K, Cross S, Nguyen TV, Larsen R, Pendergraft J, Daigle T, Tasic B, Thompson CL, Waters J, Olsen S, Margolis DJ, Zeng H, Hausser M, Carandini M, Harris KD.

eNeuro. 2017 Sep 6;4(5). pii: ENEURO.0207-17.2017. doi: 10.1523/ENEURO.0207-17.2017. eCollection 2017 Sep-Oct.

5.

Prefrontal Dopamine D1 and D2 Receptors Regulate Dissociable Aspects of Decision Making via Distinct Ventral Striatal and Amygdalar Circuits.

Jenni NL, Larkin JD, Floresco SB.

J Neurosci. 2017 Jun 28;37(26):6200-6213. doi: 10.1523/JNEUROSCI.0030-17.2017. Epub 2017 May 25.

6.

Disaggregation is a Mechanism for Emission Turn-On of ortho-Aminomethylphenylboronic Acid-Based Saccharide Sensors.

Chapin BM, Metola P, Vankayala SL, Woodcock HL, Mooibroek TJ, Lynch VM, Larkin JD, Anslyn EV.

J Am Chem Soc. 2017 Apr 19;139(15):5568-5578. doi: 10.1021/jacs.7b01755. Epub 2017 Apr 11.

PMID:
28358506
7.

Elucidating a chemical defense mechanism of Antarctic sponges: A computational study.

Vankayala SL, Kearns FL, Baker BJ, Larkin JD, Lee Woodcock H.

J Mol Graph Model. 2017 Jan;71:104-115. doi: 10.1016/j.jmgm.2016.11.004. Epub 2016 Nov 10.

PMID:
27894019
8.

Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response.

Kolovos P, Georgomanolis T, Koeferle A, Larkin JD, Brant L, Nikolicć M, Gusmao EG, Zirkel A, Knoch TA, van Ijcken WF, Cook PR, Costa IG, Grosveld FG, Papantonis A.

Genome Res. 2016 Nov;26(11):1478-1489. Epub 2016 Sep 15.

10.

Super-resolution measurement of distance between transcription sites using RNA FISH with intronic probes.

Larkin JD, Cook PR.

Methods. 2016 Apr 1;98:150-157. doi: 10.1016/j.ymeth.2015.11.009. Epub 2015 Nov 11.

11.

Modulation of risk/reward decision making by dopaminergic transmission within the basolateral amygdala.

Larkin JD, Jenni NL, Floresco SB.

Psychopharmacology (Berl). 2016 Jan;233(1):121-36. doi: 10.1007/s00213-015-4094-8. Epub 2015 Oct 3.

PMID:
26432096
12.

Promoter type influences transcriptional topography by targeting genes to distinct nucleoplasmic sites.

Larkin JD, Papantonis A, Cook PR.

J Cell Sci. 2013 May 1;126(Pt 9):2052-9. doi: 10.1242/jcs.123653. Epub 2013 Feb 26.

13.

Space exploration by the promoter of a long human gene during one transcription cycle.

Larkin JD, Papantonis A, Cook PR, Marenduzzo D.

Nucleic Acids Res. 2013 Feb 1;41(4):2216-27. doi: 10.1093/nar/gks1441. Epub 2013 Jan 8.

14.

TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed.

Papantonis A, Kohro T, Baboo S, Larkin JD, Deng B, Short P, Tsutsumi S, Taylor S, Kanki Y, Kobayashi M, Li G, Poh HM, Ruan X, Aburatani H, Ruan Y, Kodama T, Wada Y, Cook PR.

EMBO J. 2012 Nov 28;31(23):4404-14. doi: 10.1038/emboj.2012.288. Epub 2012 Oct 26.

15.

Maximum precision closed-form solution for localizing diffraction-limited spots in noisy images.

Larkin JD, Cook PR.

Opt Express. 2012 Jul 30;20(16):18478-93. doi: 10.1364/OE.20.018478.

16.

Dynamic reconfiguration of long human genes during one transcription cycle.

Larkin JD, Cook PR, Papantonis A.

Mol Cell Biol. 2012 Jul;32(14):2738-47. doi: 10.1128/MCB.00179-12. Epub 2012 May 14.

18.

Comparison of Three Chain-of-States Methods: Nudged Elastic Band and Replica Path with Restraints or Constraints.

Tao P, Hodošček M, Larkin JD, Shao Y, Brooks BR.

J Chem Theory Comput. 2012;8(12):5035-5051. Epub 2012 Sep 27.

19.

MSCALE: A General Utility for Multiscale Modeling.

Woodcock HL, Miller BT, Hodoscek M, Okur A, Larkin JD, Ponder JW, Brooks BR.

J Chem Theory Comput. 2011 Apr 12;7(4):1208-1219.

20.

Thermodynamics of boroxine formation from the aliphatic boronic acid monomers R-B(OH)2 (R = H, H3C, H2N, HO, and F): a computational investigation.

Bhat KL, Markham GD, Larkin JD, Bock CW.

J Phys Chem A. 2011 Jul 7;115(26):7785-93. doi: 10.1021/jp202409m. Epub 2011 Jun 8.

21.

Efficient Calculation of QM/MM Frequencies with the Mobile Block Hessian.

Ghysels A, Woodcock HL 3rd, Larkin JD, Miller BT, Shao Y, Kong J, Neck DV, Speybroeck VV, Waroquier M, Brooks BR.

J Chem Theory Comput. 2011 Feb 8;7(2):496-514. doi: 10.1021/ct100473f. Epub 2011 Jan 6.

PMID:
26596169
22.
23.

A computational investigation of the nitrogen-boron interaction in o-(N,N-dialkylaminomethyl)arylboronate systems.

Larkin JD, Fossey JS, James TD, Brooks BR, Bock CW.

J Phys Chem A. 2010 Dec 2;114(47):12531-9. doi: 10.1021/jp1087674. Epub 2010 Nov 5.

24.

Active RNA polymerases: mobile or immobile molecular machines?

Papantonis A, Larkin JD, Wada Y, Ohta Y, Ihara S, Kodama T, Cook PR.

PLoS Biol. 2010 Jul 13;8(7):e1000419. doi: 10.1371/journal.pbio.1000419.

25.

Computational investigation of the oxidative deboronation of boroglycine, H2N-CH2-B(OH)2, Using H2O and H2O2.

Larkin JD, Markham GD, Milkevitch M, Brooks BR, Bock CW.

J Phys Chem A. 2009 Oct 15;113(41):11028-34. doi: 10.1021/jp904149w.

26.

A computational characterization of boron-oxygen multiple bonding in HN=CH-CH=CH-NH-BO.

Larkin JD, Bhat KL, Markham GD, James TD, Brooks BR, Bock CW.

J Phys Chem A. 2008 Sep 11;112(36):8446-54. doi: 10.1021/jp800125p. Epub 2008 Aug 15.

27.

Dimers of boroglycine and methylamine boronic acid: a computational comparison of the relative importance of dative versus hydrogen bonding.

Larkin JD, Milkevitch M, Bhat KL, Markham GD, Brooks BR, Bock CW.

J Phys Chem A. 2008 Jan 10;112(1):125-33. Epub 2007 Dec 12.

PMID:
18072757
28.

A computational investigation of the geometrical structure and protodeboronation of boroglycine, H2N-CH2-B(OH)2.

Larkin JD, Bhat KL, Markham GD, Brooks BR, Lai JH, Bock CW.

J Phys Chem A. 2007 Jul 19;111(28):6489-500. Epub 2007 Jun 27.

PMID:
17595064
29.

Hydrogen bridging in the compounds X2H (X=Al,Si,P,S).

Owens ZT, Larkin JD, Schaefer HF.

J Chem Phys. 2006 Oct 28;125(16):164322.

PMID:
17092088
30.

Structure of the boronic acid dimer and the relative stabilities of its conformers.

Larkin JD, Bhat KL, Markham GD, Brooks BR, Schaefer HF 3rd, Bock CW.

J Phys Chem A. 2006 Sep 14;110(36):10633-42.

PMID:
16956246
31.

Assessing alkyl-, silyl-, and halo-substituent effects on the electron affinities of silyl radicals.

Larkin JD, Bock CW, Schaefer Iii HF.

J Phys Chem A. 2005 Nov 10;109(44):10100-5.

PMID:
16838930
32.
33.

Hepatitis B virus transgenic severe combined immunodeficient mouse model of acute and chronic liver disease.

Feitelson MA, Larkin JD, Schinazi RF.

Methods Mol Med. 2004;96:269-87. No abstract available.

PMID:
14762277
34.

New animal models of hepatitis B and C.

Feitelson MA, Larkin JD.

ILAR J. 2001;42(2):127-38. Review.

PMID:
11406715
35.

Interaction of alcohols and anesthetics with protein kinase Calpha.

Slater SJ, Kelly MB, Larkin JD, Ho C, Mazurek A, Taddeo FJ, Yeager MD, Stubbs CD.

J Biol Chem. 1997 Mar 7;272(10):6167-73.

36.

Protein kinase Calpha contains two activator binding sites that bind phorbol esters and diacylglycerols with opposite affinities.

Slater SJ, Ho C, Kelly MB, Larkin JD, Taddeo FJ, Yeager MD, Stubbs CD.

J Biol Chem. 1996 Mar 1;271(9):4627-31.

37.

Direct activation of protein kinase C by 1 alpha,25-dihydroxyvitamin D3.

Slater SJ, Kelly MB, Taddeo FJ, Larkin JD, Yeager MD, McLane JA, Ho C, Stubbs CD.

J Biol Chem. 1995 Mar 24;270(12):6639-43.

38.

Tooth supported complete dentures: twenty-seventh year of observation.

Larkin JD.

Tex Dent J. 1973 Oct;91(10):26-30. No abstract available.

PMID:
4519569
39.

Immediate interim tooth-supported complete dentures.

Morrow RM, Rudd KD, Birmingham FD, Larkin JD.

J Prosthet Dent. 1973 Oct;30(4 Pt 2):695-700. No abstract available.

PMID:
4517897
40.

Evaluation of methods for polishing porcelain denture teeth.

Morrow RM, Brown CE, Larkin JD, Bernui R, Rudd KD.

J Prosthet Dent. 1973 Aug;30(2):222-6. No abstract available.

PMID:
4515674
41.

Tooth contacts in denture occlusion: centric and eccentric.

Larkin JD.

Dent Clin North Am. 1971 Oct;15(4):861-74. No abstract available.

PMID:
5286182
42.

The power of communications.

Larkin JD.

Tex Dent J. 1967 May;85(5):18-9. No abstract available.

PMID:
5230841
43.

What do you mean commercial?...

Larkin JD.

Tex Dent J. 1967 Mar;85(3):9. No abstract available.

PMID:
5227993
44.

Pin and sleeve occlusal resistor.

Larkin JD, Jackson EP.

Tex Dent J. 1967 Mar;85(3):4-8. No abstract available.

PMID:
5227992
45.

Means for measuring the interocclusal distance.

Larkin JD.

J Prosthet Dent. 1967 Mar;17(3):247-50. No abstract available.

PMID:
5226414
46.

Where are we being carried?

Larkin JD.

Tex Dent J. 1967 Jan;85(1):9. No abstract available.

PMID:
5227989
47.

Physician , heal thyself...

Larkin JD.

Tex Dent J. 1966 Dec;83(12):8 passim. No abstract available.

PMID:
4162725
48.

Same old quicksand.

Larkin JD.

Tex Dent J. 1966 Mar;84(3):16-7. No abstract available.

PMID:
5216952
49.

Have we slept too late?

Larkin JD.

Tex Dent J. 1965 Nov;83(11):12. No abstract available.

PMID:
5214538
50.

For better or worse?

Larkin JD.

Tex Dent J. 1965 Oct;83(10):16-7. No abstract available.

PMID:
5214166

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