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Items: 31

1.

Shifts in the Human Gut Microbiota Structure Caused by Quadruple Helicobacter pylori Eradication Therapy.

Olekhnovich EI, Manolov AI, Samoilov AE, Prianichnikov NA, Malakhova MV, Tyakht AV, Pavlenko AV, Babenko VV, Larin AK, Kovarsky BA, Starikova EV, Glushchenko OE, Safina DD, Markelova MI, Boulygina EA, Khusnutdinova DR, Malanin SY, Abdulkhakov SR, Abdulkhakov RA, Grigoryeva TV, Kostryukova ES, Govorun VM, Ilina EN.

Front Microbiol. 2019 Aug 27;10:1902. doi: 10.3389/fmicb.2019.01902. eCollection 2019.

2.

Three DNA Polymorphisms Previously Identified as Markers for Handgrip Strength Are Associated With Strength in Weightlifters and Muscle Fiber Hypertrophy.

Grishina EE, Zmijewski P, Semenova EA, Cięszczyk P, Humińska-Lisowska K, Michałowska-Sawczyn M, Maculewicz E, Crewther B, Orysiak J, Kostryukova ES, Kulemin NA, Borisov OV, Khabibova SA, Larin AK, Pavlenko AV, Lyubaeva EV, Popov DV, Lysenko EA, Vepkhvadze TF, Lednev EM, Bondareva EA, Erskine RM, Generozov EV, Ahmetov II.

J Strength Cond Res. 2019 Jul 29. doi: 10.1519/JSC.0000000000003304. [Epub ahead of print]

PMID:
31361736
3.

A Genome-Wide Association Study of Sprint Performance in Elite Youth Football Players.

Pickering C, Suraci B, Semenova EA, Boulygina EA, Kostryukova ES, Kulemin NA, Borisov OV, Khabibova SA, Larin AK, Pavlenko AV, Lyubaeva EV, Popov DV, Lysenko EA, Vepkhvadze TF, Lednev EM, Leońska-Duniec A, Pająk B, Chycki J, Moska W, Lulińska-Kuklik E, Dornowski M, Maszczyk A, Bradley B, Kana-Ah A, Cięszczyk P, Generozov EV, Ahmetov II.

J Strength Cond Res. 2019 Sep;33(9):2344-2351. doi: 10.1519/JSC.0000000000003259.

PMID:
31343553
4.

Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy.

Nikitina AS, Belodedova AV, Malyugin BE, Sharova EI, Kostryukova ES, Larin AK, Veselovsky VA, Antonova OP, Skorodumova LO.

Data Brief. 2019 May 23;25:104047. doi: 10.1016/j.dib.2019.104047. eCollection 2019 Aug.

5.

UBR5 is a novel E3 ubiquitin ligase involved in skeletal muscle hypertrophy and recovery from atrophy.

Seaborne RA, Hughes DC, Turner DC, Owens DJ, Baehr LM, Gorski P, Semenova EA, Borisov OV, Larin AK, Popov DV, Generozov EV, Sutherland H, Ahmetov II, Jarvis JC, Bodine SC, Sharples AP.

J Physiol. 2019 Jul;597(14):3727-3749. doi: 10.1113/JP278073. Epub 2019 Jun 11.

PMID:
31093990
6.

The A-allele of the FTO Gene rs9939609 Polymorphism Is Associated With Decreased Proportion of Slow Oxidative Muscle Fibers and Over-represented in Heavier Athletes.

Guilherme JPLF, Egorova ES, Semenova EA, Kostryukova ES, Kulemin NA, Borisov OV, Khabibova SA, Larin AK, Ospanova EA, Pavlenko AV, Lyubaeva EV, Popov DV, Lysenko EA, Vepkhvadze TF, Lednev EM, Govorun VM, Generozov EV, Ahmetov II, Lancha Junior AH.

J Strength Cond Res. 2019 Mar;33(3):691-700. doi: 10.1519/JSC.0000000000003032.

PMID:
30694969
7.

Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses.

Tyakht AV, Manolov AI, Kanygina AV, Ischenko DS, Kovarsky BA, Popenko AS, Pavlenko AV, Elizarova AV, Rakitina DV, Baikova JP, Ladygina VG, Kostryukova ES, Karpova IY, Semashko TA, Larin AK, Grigoryeva TV, Sinyagina MN, Malanin SY, Shcherbakov PL, Kharitonova AY, Khalif IL, Shapina MV, Maev IV, Andreev DN, Belousova EA, Buzunova YM, Alexeev DG, Govorun VM.

BMC Genomics. 2018 Dec 27;19(1):968. doi: 10.1186/s12864-018-5306-5.

8.

AGTR2 and sprint/power performance: a case-control replication study for rs11091046 polymorphism in two ethnicities.

Yvert TP, Zempo H, Gabdrakhmanova LJ, Kikuchi N, Miyamoto-Mikami E, Murakami H, Naito H, Cieszczyk P, Leznicka K, Kostryukova ES, Alexeev DG, Egorova ES, Maciejewska-Skrendo A, Larin AK, Generozov EV, Kulemin NA, Ospanova EA, Pavlenko AV, Sawczuk M, Zmijewski P, Lulinska-Kuklik E, Govorun VM, Miyachi M, Ahmetov II, Fuku N.

Biol Sport. 2018 Jun;35(2):105-109. doi: 10.5114/biolsport.2018.71599. Epub 2017 Nov 23.

9.

Draft Genome Sequences of Five Staphylococcus aureus Strains Isolated from Clinically Healthy Cows in the Russian Federation.

Fursova KK, Artem'eva OA, Nikanova DA, Larin AK, Zinovieva NA, Brovko FA.

Genome Announc. 2018 Apr 19;6(16). pii: e00275-18. doi: 10.1128/genomeA.00275-18.

10.

Draft genomes of Enterococcus faecium strains isolated from human feces before and after eradication therapy against Helicobacter pylori.

Prianichnikov NA, Malakhova MV, Babenko VV, Larin AK, Olekhnovich EI, Starikova EV, Chuvelev DI, Glushchenko OE, Samoilov AE, Manolov AI, Kovarsky BA, Tyakht AV, Pavlenko AV, Ilina EN, Kostryukova ES.

Data Brief. 2017 Nov 27;16:511-514. doi: 10.1016/j.dib.2017.11.069. eCollection 2018 Feb.

11.

Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease.

Dubinkina VB, Tyakht AV, Odintsova VY, Yarygin KS, Kovarsky BA, Pavlenko AV, Ischenko DS, Popenko AS, Alexeev DG, Taraskina AY, Nasyrova RF, Krupitsky EM, Shalikiani NV, Bakulin IG, Shcherbakov PL, Skorodumova LO, Larin AK, Kostryukova ES, Abdulkhakov RA, Abdulkhakov SR, Malanin SY, Ismagilova RK, Grigoryeva TV, Ilina EN, Govorun VM.

Microbiome. 2017 Oct 17;5(1):141. doi: 10.1186/s40168-017-0359-2.

12.

Genome analysis of E. coli isolated from Crohn's disease patients.

Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM.

BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x.

13.

Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis.

Tyakht AV, Dubinkina VB, Odintsova VY, Yarygin KS, Kovarsky BA, Pavlenko AV, Ischenko DS, Popenko AS, Alexeev DG, Taraskina AY, Nasyrova RF, Krupitski EM, Shalikiani NV, Bakulin IG, Shcherbakov PL, Skorodumova LO, Larin AK, Kostryukova ES, Abdulkhakov RA, Abdulkhakov SR, Malanin SY, Ismagilova RK, Grigoryeva TV, Ilina EN, Govorun VM.

Data Brief. 2017 Jan 17;11:98-102. doi: 10.1016/j.dib.2017.01.008. eCollection 2017 Apr.

14.

Data on gut metagenomes of the patients with Helicobacter pylori infection before and after the antibiotic therapy.

Glushchenko OE, Samoilov AE, Olekhnovich EI, Kovarsky BA, Tyakht AV, Pavlenko AV, Babenko VV, Larin AK, Kostryukova ES, Malakhova MV, Ilina EN, Abdulkhakov RA, Safina DI, Grigoryeva TV, Abdulkhakov SR, Govorun VM.

Data Brief. 2017 Jan 17;11:68-71. doi: 10.1016/j.dib.2017.01.007. eCollection 2017 Apr.

15.

[GSTP1, APC and RASSF1 gene methylation in prostate cancer samples: comparative analysis of MS-HRM method and Infinium HumanMethylation450 BeadChip beadchiparray diagnostic value].

Skorodumova LO, Babalyan KA, Sultanov R, Vasiliev AO, Govorov AV, Pushkar DY, Prilepskaya EA, Danilenko SA, Generozov EV, Larin AK, Kostryukova ES, Sharova EI.

Biomed Khim. 2016 Nov;62(6):708-714. doi: 10.18097/PBMC20166206708. Russian.

PMID:
28026816
16.

No Evidence of a Common DNA Variant Profile Specific to World Class Endurance Athletes.

Rankinen T, Fuku N, Wolfarth B, Wang G, Sarzynski MA, Alexeev DG, Ahmetov II, Boulay MR, Cieszczyk P, Eynon N, Filipenko ML, Garton FC, Generozov EV, Govorun VM, Houweling PJ, Kawahara T, Kostryukova ES, Kulemin NA, Larin AK, Maciejewska-Karłowska A, Miyachi M, Muniesa CA, Murakami H, Ospanova EA, Padmanabhan S, Pavlenko AV, Pyankova ON, Santiago C, Sawczuk M, Scott RA, Uyba VV, Yvert T, Perusse L, Ghosh S, Rauramaa R, North KN, Lucia A, Pitsiladis Y, Bouchard C.

PLoS One. 2016 Jan 29;11(1):e0147330. doi: 10.1371/journal.pone.0147330. eCollection 2016.

17.

[Genome-wide analysis of DNA methylation in prostate cancer using the technology of Infinium HumanMethylation450 BeadChip (HM450)].

Babalyan KA, Sultanov R, Generozov EV, Zakharzhevskaya NB, Sharova EI, Peshkov MN, Vasilev AO, Govorov AV, Pushkar DY, Prilepskaya EA, Danilenko SA, Babikova EA, Larin AK, Govorun VM.

Vopr Onkol. 2016;62(1):122-32. Russian.

PMID:
30444590
18.

[Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome].

Dubinkina VB, Tyakht AV, Ilina EN, Ischenko DS, Kovarsky BA, Yarygin KS, Pavlenko AV, Popenko AS, Alexeev DG, Taraskina AE, Nasyrova RF, Krupitski EM, Skorodumova LO, Larin AK, Kostryukova ES, Govorun VM.

Biomed Khim. 2015 Nov-Dec;61(6):742-9. doi: 10.18097/PBMC20156106742. Russian.

PMID:
26716747
19.

Athlome Project Consortium: a concerted effort to discover genomic and other "omic" markers of athletic performance.

Pitsiladis YP, Tanaka M, Eynon N, Bouchard C, North KN, Williams AG, Collins M, Moran CN, Britton SL, Fuku N, Ashley EA, Klissouras V, Lucia A, Ahmetov II, de Geus E, Alsayrafi M; Athlome Project Consortium.

Physiol Genomics. 2016 Mar;48(3):183-90. doi: 10.1152/physiolgenomics.00105.2015. Epub 2015 Dec 29. Review.

20.

Genome-wide association study identifies three novel genetic markers associated with elite endurance performance.

Ahmetov I, Kulemin N, Popov D, Naumov V, Akimov E, Bravy Y, Egorova E, Galeeva A, Generozov E, Kostryukova E, Larin A, Mustafina Lj, Ospanova E, Pavlenko A, Starnes L, Żmijewski P, Alexeev D, Vinogradova O, Govorun V.

Biol Sport. 2015 Mar;32(1):3-9. doi: 10.5604/20831862.1124568. Epub 2014 Oct 21.

21.

[Variability in the relative quantity of human DNA resulted from metagenomic analysis of gut microbiota].

Kostriukova ES, Karpova IY, Larin AK, Popenko AC, Tiakht AV, Il'ina EN.

Biomed Khim. 2014 Nov-Dec;60(6):695-701. Russian.

PMID:
25552511
22.

Variations in O-antigen biosynthesis and O-acetylation associated with altered phage sensitivity in Escherichia coli 4s.

Knirel YA, Prokhorov NS, Shashkov AS, Ovchinnikova OG, Zdorovenko EL, Liu B, Kostryukova ES, Larin AK, Golomidova AK, Letarov AV.

J Bacteriol. 2015 Mar;197(5):905-12. doi: 10.1128/JB.02398-14. Epub 2014 Dec 15.

23.

RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.

Tyakht AV, Ilina EN, Alexeev DG, Ischenko DS, Gorbachev AY, Semashko TA, Larin AK, Selezneva OV, Kostryukova ES, Karalkin PA, Vakhrushev IV, Kurbatov LK, Archakov AI, Govorun VM.

BMC Genomics. 2014 Dec 15;15:1108. doi: 10.1186/1471-2164-15-1108.

24.

AGTR2 gene polymorphism is associated with muscle fibre composition, athletic status and aerobic performance.

Mustafina LJ, Naumov VA, Cieszczyk P, Popov DV, Lyubaeva EV, Kostryukova ES, Fedotovskaya ON, Druzhevskaya AM, Astratenkova IV, Glotov AS, Alexeev DG, Mustafina MM, Egorova ES, Maciejewska-Karłowska A, Larin AK, Generozov EV, Nurullin RE, Jastrzębski Z, Kulemin NA, Ospanova EA, Pavlenko AV, Sawczuk M, Akimov EB, Danilushkina AA, Zmijewski P, Vinogradova OL, Govorun VM, Ahmetov II.

Exp Physiol. 2014 Aug;99(8):1042-52. doi: 10.1113/expphysiol.2014.079335. Epub 2014 May 30.

25.

SOD2 gene polymorphism and muscle damage markers in elite athletes.

Ahmetov II, Naumov VA, Donnikov AE, Maciejewska-Karłowska A, Kostryukova ES, Larin AK, Maykova EV, Alexeev DG, Fedotovskaya ON, Generozov EV, Jastrzębski Z, Zmijewski P, Kravtsova OA, Kulemin NA, Leonska-Duniec A, Martykanova DS, Ospanova EA, Pavlenko AV, Podol'skaya AA, Sawczuk M, Alimova FK, Trofimov DY, Govorun VM, Cieszczyk P.

Free Radic Res. 2014 Aug;48(8):948-55. doi: 10.3109/10715762.2014.928410. Epub 2014 Jun 23.

PMID:
24865797
26.

Human gut microbiota community structures in urban and rural populations in Russia.

Tyakht AV, Kostryukova ES, Popenko AS, Belenikin MS, Pavlenko AV, Larin AK, Karpova IY, Selezneva OV, Semashko TA, Ospanova EA, Babenko VV, Maev IV, Cheremushkin SV, Kucheryavyy YA, Shcherbakov PL, Grinevich VB, Efimov OI, Sas EI, Abdulkhakov RA, Abdulkhakov SR, Lyalyukova EA, Livzan MA, Vlassov VV, Sagdeev RZ, Tsukanov VV, Osipenko MF, Kozlova IV, Tkachev AV, Sergienko VI, Alexeev DG, Govorun VM.

Nat Commun. 2013;4:2469. doi: 10.1038/ncomms3469.

27.

Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips.

Naumov VA, Generozov EV, Zaharjevskaya NB, Matushkina DS, Larin AK, Chernyshov SV, Alekseev MV, Shelygin YA, Govorun VM.

Epigenetics. 2013 Sep;8(9):921-34. doi: 10.4161/epi.25577. Epub 2013 Jul 17.

28.

Draft Genome of the Nitrogen-Fixing Bacterium Pseudomonas stutzeri Strain KOS6 Isolated from Industrial Hydrocarbon Sludge.

Grigoryeva TV, Laikov AV, Naumova RP, Manolov AI, Larin AK, Karpova IY, Semashko TA, Alexeev DG, Kostryukova ES, Müller R, Govorun VM.

Genome Announc. 2013 Jan;1(1). pii: e00072-12. doi: 10.1128/genomeA.00072-12. Epub 2013 Jan 31.

29.

MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads.

Tyakht AV, Popenko AS, Belenikin MS, Altukhov IA, Pavlenko AV, Kostryukova ES, Selezneva OV, Larin AK, Karpova IY, Alexeev DG.

Source Code Biol Med. 2012 Dec 7;7(1):13. doi: 10.1186/1751-0473-7-13.

30.

Computer analysis of metagenomic data--prediction of quantitative value of specific activity of proteins.

Ivanisenko VA, Demenkov PS, Pintus SS, Ivanisenko TV, Podkolodny NL, Ivanisenko LN, Rozanov AS, Bryanskaya AV, Kostrjukova ES, Levizkiy SA, Selezneva OV, Chukin MM, Larin AK, Kondratov IG, Lazarev VN, Peltek SE, Govorun VM, Kolchanov NA.

Dokl Biochem Biophys. 2012 Mar-Apr;443:76-80. doi: 10.1134/S1607672912020056. Epub 2012 May 5. No abstract available.

PMID:
22562630
31.

A method for identification of vaginal epithelial microflora by the analysis of 16S ribosomal RNA gene.

Larin AK, Seleznyova OV, Momynaliev KT.

Bull Exp Biol Med. 2007 Sep;144(3):413-5.

PMID:
18457047

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