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Items: 1 to 50 of 260

1.

ESR - a retinal protein with unusual properties from Exiguobacterium sibiricum.

Petrovskaya LE, Balashov SP, Lukashev EP, Imasheva ES, Gushchin IY, Dioumaev AK, Rubin AB, Dolgikh DA, Gordeliy VI, Lanyi JK, Kirpichnikov MP.

Biochemistry (Mosc). 2015 Jun;80(6):688-700. doi: 10.1134/S000629791506005X. Review.

2.

Light-driven Na(+) pump from Gillisia limnaea: a high-affinity Na(+) binding site is formed transiently in the photocycle.

Balashov SP, Imasheva ES, Dioumaev AK, Wang JM, Jung KH, Lanyi JK.

Biochemistry. 2014 Dec 9;53(48):7549-61. doi: 10.1021/bi501064n. Epub 2014 Nov 24.

3.

Directed evolution of a far-red fluorescent rhodopsin.

McIsaac RS, Engqvist MK, Wannier T, Rosenthal AZ, Herwig L, Flytzanis NC, Imasheva ES, Lanyi JK, Balashov SP, Gradinaru V, Arnold FH.

Proc Natl Acad Sci U S A. 2014 Sep 9;111(36):13034-9. doi: 10.1073/pnas.1413987111. Epub 2014 Aug 25.

4.

Nature's toolkit for microbial rhodopsin ion pumps.

Béjà O, Lanyi JK.

Proc Natl Acad Sci U S A. 2014 May 6;111(18):6538-9. doi: 10.1073/pnas.1405093111. Epub 2014 Apr 15. No abstract available.

5.

Photocycle of Exiguobacterium sibiricum rhodopsin characterized by low-temperature trapping in the IR and time-resolved studies in the visible.

Dioumaev AK, Petrovskaya LE, Wang JM, Balashov SP, Dolgikh DA, Kirpichnikov MP, Lanyi JK.

J Phys Chem B. 2013 Jun 20;117(24):7235-53. doi: 10.1021/jp402430w. Epub 2013 Jun 10.

6.

Breaking the carboxyl rule: lysine 96 facilitates reprotonation of the Schiff base in the photocycle of a retinal protein from Exiguobacterium sibiricum.

Balashov SP, Petrovskaya LE, Imasheva ES, Lukashev EP, Dioumaev AK, Wang JM, Sychev SV, Dolgikh DA, Rubin AB, Kirpichnikov MP, Lanyi JK.

J Biol Chem. 2013 Jul 19;288(29):21254-65. doi: 10.1074/jbc.M113.465138. Epub 2013 May 21.

7.

Structure changes upon deprotonation of the proton release group in the bacteriorhodopsin photocycle.

Morgan JE, Vakkasoglu AS, Lanyi JK, Lugtenburg J, Gennis RB, Maeda A.

Biophys J. 2012 Aug 8;103(3):444-52. doi: 10.1016/j.bpj.2012.06.022.

8.

Aspartate-histidine interaction in the retinal schiff base counterion of the light-driven proton pump of Exiguobacterium sibiricum.

Balashov SP, Petrovskaya LE, Lukashev EP, Imasheva ES, Dioumaev AK, Wang JM, Sychev SV, Dolgikh DA, Rubin AB, Kirpichnikov MP, Lanyi JK.

Biochemistry. 2012 Jul 24;51(29):5748-62. doi: 10.1021/bi300409m. Epub 2012 Jul 10.

9.

Molecular dynamics simulation of the unfolding of individual bacteriorhodopsin helices in sodium dodecyl sulfate micelles.

Krishnamani V, Lanyi JK.

Biochemistry. 2012 Feb 14;51(6):1061-9. doi: 10.1021/bi201770y. Epub 2012 Jan 30.

PMID:
22304411
10.

Secondary and tertiary structure of bacteriorhodopsin in the SDS denatured state.

Krishnamani V, Hegde BG, Langen R, Lanyi JK.

Biochemistry. 2012 Feb 14;51(6):1051-60. doi: 10.1021/bi201769z. Epub 2012 Jan 30.

PMID:
22242919
11.

Carotenoid response to retinal excitation and photoisomerization dynamics in xanthorhodopsin.

Slouf V, Balashov SP, Lanyi JK, Pullerits T, Polívka T.

Chem Phys Lett. 2011 Nov 7;516(1-3):96-101.

12.

Structural changes in bacteriorhodopsin during in vitro refolding from a partially denatured state.

Krishnamani V, Lanyi JK.

Biophys J. 2011 Mar 16;100(6):1559-67. doi: 10.1016/j.bpj.2011.02.004.

13.

Removal and reconstitution of the carotenoid antenna of xanthorhodopsin.

Imasheva ES, Balashov SP, Wang JM, Lanyi JK.

J Membr Biol. 2011 Jan;239(1-2):95-104. doi: 10.1007/s00232-010-9322-x. Epub 2010 Nov 21.

14.

Reconstitution of gloeobacter rhodopsin with echinenone: role of the 4-keto group.

Balashov SP, Imasheva ES, Choi AR, Jung KH, Liaaen-Jensen S, Lanyi JK.

Biochemistry. 2010 Nov 16;49(45):9792-9. doi: 10.1021/bi1014166. Epub 2010 Oct 26.

16.

Low-temperature FTIR study of multiple K intermediates in the photocycles of bacteriorhodopsin and xanthorhodopsin.

Dioumaev AK, Wang JM, Lanyi JK.

J Phys Chem B. 2010 Mar 4;114(8):2920-31. doi: 10.1021/jp908698f.

17.

Two bathointermediates of the bacteriorhodopsin photocycle, from time-resolved nanosecond spectra in the visible.

Dioumaev AK, Lanyi JK.

J Phys Chem B. 2009 Dec 31;113(52):16643-53. doi: 10.1021/jp907393m.

18.

Reconstitution of Gloeobacter violaceus rhodopsin with a light-harvesting carotenoid antenna.

Imasheva ES, Balashov SP, Choi AR, Jung KH, Lanyi JK.

Biochemistry. 2009 Nov 24;48(46):10948-55. doi: 10.1021/bi901552x.

19.

Structural snapshots of conformational changes in a seven-helix membrane protein: lessons from bacteriorhodopsin.

Hirai T, Subramaniam S, Lanyi JK.

Curr Opin Struct Biol. 2009 Aug;19(4):433-9. doi: 10.1016/j.sbi.2009.07.009. Epub 2009 Jul 28. Review.

20.

Control of retinal isomerization in bacteriorhodopsin in the high-intensity regime.

Florean AC, Cardoza D, White JL, Lanyi JK, Sension RJ, Bucksbaum PH.

Proc Natl Acad Sci U S A. 2009 Jul 7;106(27):10896-900. doi: 10.1073/pnas.0904589106. Epub 2009 Jun 29.

21.

Structural changes in the N and N' states of the bacteriorhodopsin photocycle.

Chen D, Lanyi JK.

Biophys J. 2009 Apr 8;96(7):2779-88. doi: 10.1016/j.bpj.2008.12.3935.

22.

Femtosecond carotenoid to retinal energy transfer in xanthorhodopsin.

Polívka T, Balashov SP, Chábera P, Imasheva ES, Yartsev A, Sundström V, Lanyi JK.

Biophys J. 2009 Mar 18;96(6):2268-77. doi: 10.1016/j.bpj.2009.01.004.

23.

Infrared monitoring of interlayer water in stacks of purple membranes.

Dioumaev AK, Lanyi JK.

Photochem Photobiol. 2009 Mar-Apr;85(2):598-608. doi: 10.1111/j.1751-1097.2008.00512.x. Epub 2009 Jan 19.

24.

Crystallographic structure of xanthorhodopsin, the light-driven proton pump with a dual chromophore.

Luecke H, Schobert B, Stagno J, Imasheva ES, Wang JM, Balashov SP, Lanyi JK.

Proc Natl Acad Sci U S A. 2008 Oct 28;105(43):16561-5. doi: 10.1073/pnas.0807162105. Epub 2008 Oct 15.

25.

Switch from conventional to distributed kinetics in the bacteriorhodopsin photocycle.

Dioumaev AK, Lanyi JK.

Biochemistry. 2008 Oct 21;47(42):11125-33. doi: 10.1021/bi801247e. Epub 2008 Sep 27.

26.

Excitation energy-transfer and the relative orientation of retinal and carotenoid in xanthorhodopsin.

Balashov SP, Imasheva ES, Wang JM, Lanyi JK.

Biophys J. 2008 Sep;95(5):2402-14. doi: 10.1529/biophysj.108.132175. Epub 2008 May 30.

27.

Xanthorhodopsin: a bacteriorhodopsin-like proton pump with a carotenoid antenna.

Lanyi JK, Balashov SP.

Biochim Biophys Acta. 2008 Jul-Aug;1777(7-8):684-8. doi: 10.1016/j.bbabio.2008.05.005. Epub 2008 May 16.

28.

Chromophore interaction in xanthorhodopsin--retinal dependence of salinixanthin binding.

Imasheva ES, Balashov SP, Wang JM, Smolensky E, Sheves M, Lanyi JK.

Photochem Photobiol. 2008 Jul-Aug;84(4):977-84. doi: 10.1111/j.1751-1097.2008.00337.x. Epub 2008 Apr 9.

29.
30.
31.

Xanthorhodopsin: Proton pump with a carotenoid antenna.

Balashov SP, Lanyi JK.

Cell Mol Life Sci. 2007 Sep;64(18):2323-8. Review.

PMID:
17571211
32.

Bacteriorhodopsin photocycle at cryogenic temperatures reveals distributed barriers of conformational substates.

Dioumaev AK, Lanyi JK.

Proc Natl Acad Sci U S A. 2007 Jun 5;104(23):9621-6. Epub 2007 May 29.

33.

Electron paramagnetic resonance study of structural changes in the O photointermediate of bacteriorhodopsin.

Chen D, Wang JM, Lanyi JK.

J Mol Biol. 2007 Feb 23;366(3):790-805. Epub 2006 Dec 12.

34.

Structural changes in the L photointermediate of bacteriorhodopsin.

Lanyi JK, Schobert B.

J Mol Biol. 2007 Feb 2;365(5):1379-92. Epub 2006 Nov 10.

35.

Functions of carotenoids in xanthorhodopsin and archaerhodopsin, from action spectra of photoinhibition of cell respiration.

Boichenko VA, Wang JM, Antón J, Lanyi JK, Balashov SP.

Biochim Biophys Acta. 2006 Dec;1757(12):1649-56. Epub 2006 Aug 30.

37.
38.

pH-dependent transitions in xanthorhodopsin.

Imasheva ES, Balashov SP, Wang JM, Lanyi JK.

Photochem Photobiol. 2006 Nov-Dec;82(6):1406-13.

39.
40.

Proton transfers in the bacteriorhodopsin photocycle.

Lanyi JK.

Biochim Biophys Acta. 2006 Aug;1757(8):1012-8. Epub 2005 Dec 9. Review.

41.

Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna.

Balashov SP, Imasheva ES, Boichenko VA, Antón J, Wang JM, Lanyi JK.

Science. 2005 Sep 23;309(5743):2061-4.

42.

Formation of a long-lived photoproduct with a deprotonated Schiff base in proteorhodopsin, and its enhancement by mutation of Asp227.

Imasheva ES, Shimono K, Balashov SP, Wang JM, Zadok U, Sheves M, Kamo N, Lanyi JK.

Biochemistry. 2005 Aug 16;44(32):10828-38.

PMID:
16086585
43.

Proton binding within a membrane protein by a protonated water cluster.

Garczarek F, Brown LS, Lanyi JK, Gerwert K.

Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3633-8. Epub 2005 Feb 28.

44.

What is the real crystallographic structure of the L photointermediate of bacteriorhodopsin?

Lanyi JK.

Biochim Biophys Acta. 2004 Jul 23;1658(1-2):14-22. Review.

45.

X-ray diffraction of bacteriorhodopsin photocycle intermediates.

Lanyi JK.

Mol Membr Biol. 2004 May-Jun;21(3):143-50. Review.

PMID:
15204622
46.

The nitrate transporting photochemical reaction cycle of the pharaonis halorhodopsin.

Bálint Z, Lakatos M, Ganea C, Lanyi JK, Váró G.

Biophys J. 2004 Mar;86(3):1655-63.

47.

Bacteriorhodopsin.

Lanyi JK.

Annu Rev Physiol. 2004;66:665-88. Review.

PMID:
14977418
48.

Selectivity of retinal photoisomerization in proteorhodopsin is controlled by aspartic acid 227.

Imasheva ES, Balashov SP, Wang JM, Dioumaev AK, Lanyi JK.

Biochemistry. 2004 Feb 17;43(6):1648-55.

PMID:
14769042

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