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Items: 45

1.

Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus.

Wang X, You X, Langer JD, Hou J, Rupprecht F, Vlatkovic I, Quedenau C, Tushev G, Epstein I, Schaefke B, Sun W, Fang L, Li G, Hu Y, Schuman EM, Chen W.

Nat Commun. 2019 Nov 1;10(1):5009. doi: 10.1038/s41467-019-13037-0.

2.

Active site rearrangement and structural divergence in prokaryotic respiratory oxidases.

Safarian S, Hahn A, Mills DJ, Radloff M, Eisinger ML, Nikolaev A, Meier-Credo J, Melin F, Miyoshi H, Gennis RB, Sakamoto J, Langer JD, Hellwig P, Kühlbrandt W, Michel H.

Science. 2019 Oct 4;366(6461):100-104. doi: 10.1126/science.aay0967.

PMID:
31604309
3.

Proteome Analysis of Enriched Heterocysts from Two Hydrogenase Mutants from Anabaena sp. PCC 7120.

Kourpa K, Manarolaki E, Lyratzakis A, Strataki V, Rupprecht F, Langer JD, Tsiotis G.

Proteomics. 2019 Oct;19(19):e1800332. doi: 10.1002/pmic.201800332. Epub 2019 Aug 28.

PMID:
31430420
4.

Larval Zebrafish Proteome Regulation in Response to an Environmental Challenge.

Langebeck-Jensen K, Shahar OD, Schuman EM, Langer JD, Ryu S.

Proteomics. 2019 Jul;19(14):e1900028. doi: 10.1002/pmic.201900028.

PMID:
31168896
5.

Cell-type-specific metabolic labeling, detection and identification of nascent proteomes in vivo.

Alvarez-Castelao B, Schanzenbächer CT, Langer JD, Schuman EM.

Nat Protoc. 2019 Feb;14(2):556-575. doi: 10.1038/s41596-018-0106-6.

PMID:
30610240
6.

Elucidating the control and development of skin patterning in cuttlefish.

Reiter S, Hülsdunk P, Woo T, Lauterbach MA, Eberle JS, Akay LA, Longo A, Meier-Credo J, Kretschmer F, Langer JD, Kaschube M, Laurent G.

Nature. 2018 Oct;562(7727):361-366. doi: 10.1038/s41586-018-0591-3. Epub 2018 Oct 17.

7.

Local and global influences on protein turnover in neurons and glia.

Dörrbaum AR, Kochen L, Langer JD, Schuman EM.

Elife. 2018 Jun 19;7. pii: e34202. doi: 10.7554/eLife.34202.

8.

Structural basis for energy transduction by respiratory alternative complex III.

Sousa JS, Calisto F, Langer JD, Mills DJ, Refojo PN, Teixeira M, Kühlbrandt W, Vonck J, Pereira MM.

Nat Commun. 2018 Apr 30;9(1):1728. doi: 10.1038/s41467-018-04141-8.

9.

The Xenobiotic Extrusion Mechanism of the MATE Transporter NorM_PS from Pseudomonas stutzeri.

Eisinger ML, Nie L, Dörrbaum AR, Langer JD, Michel H.

J Mol Biol. 2018 Apr 27;430(9):1311-1323. doi: 10.1016/j.jmb.2018.03.012. Epub 2018 Mar 16.

PMID:
29555555
10.

Time- and polarity-dependent proteomic changes associated with homeostatic scaling at central synapses.

Schanzenbächer CT, Langer JD, Schuman EM.

Elife. 2018 Feb 15;7. pii: e33322. doi: 10.7554/eLife.33322.

11.

Tumorigenic and Antiproliferative Properties of the TALE-Transcription Factors MEIS2D and MEIS2A in Neuroblastoma.

Groß A, Schulz C, Kolb J, Koster J, Wehner S, Czaplinski S, Khilan A, Rohrer H, Harter PN, Klingebiel T, Langer JD, Geerts D, Schulte D.

Cancer Res. 2018 Apr 15;78(8):1935-1947. doi: 10.1158/0008-5472.CAN-17-1860. Epub 2018 Jan 30.

12.

Cell-type-specific metabolic labeling of nascent proteomes in vivo.

Alvarez-Castelao B, Schanzenbächer CT, Hanus C, Glock C, Tom Dieck S, Dörrbaum AR, Bartnik I, Nassim-Assir B, Ciirdaeva E, Mueller A, Dieterich DC, Tirrell DA, Langer JD, Schuman EM.

Nat Biotechnol. 2017 Dec;35(12):1196-1201. doi: 10.1038/nbt.4016. Epub 2017 Nov 6.

PMID:
29106408
13.

Ligand-induced conformational dynamics of the Escherichia coli Na+/H+ antiporter NhaA revealed by hydrogen/deuterium exchange mass spectrometry.

Eisinger ML, Dörrbaum AR, Michel H, Padan E, Langer JD.

Proc Natl Acad Sci U S A. 2017 Oct 31;114(44):11691-11696. doi: 10.1073/pnas.1703422114. Epub 2017 Oct 16.

14.

Cryo-EM Structure of the TOM Core Complex from Neurospora crassa.

Bausewein T, Mills DJ, Langer JD, Nitschke B, Nussberger S, Kühlbrandt W.

Cell. 2017 Aug 10;170(4):693-700.e7. doi: 10.1016/j.cell.2017.07.012.

15.

MEIS homeodomain proteins facilitate PARP1/ARTD1-mediated eviction of histone H1.

Hau AC, Grebbin BM, Agoston Z, Anders-Maurer M, Müller T, Groß A, Kolb J, Langer JD, Döring C, Schulte D.

J Cell Biol. 2017 Sep 4;216(9):2715-2729. doi: 10.1083/jcb.201701154. Epub 2017 Jul 24.

16.

Subunit CcoQ is involved in the assembly of the Cbb3-type cytochrome c oxidases from Pseudomonas stutzeri ZoBell but not required for their activity.

Kohlstaedt M, Buschmann S, Langer JD, Xie H, Michel H.

Biochim Biophys Acta Bioenerg. 2017 Mar;1858(3):231-238. doi: 10.1016/j.bbabio.2016.12.006. Epub 2016 Dec 20.

17.

Ligand binding and conformational dynamics in a flavin-based electron-bifurcating enzyme complex revealed by Hydrogen-Deuterium Exchange Mass Spectrometry.

Demmer JK, Rupprecht FA, Eisinger ML, Ermler U, Langer JD.

FEBS Lett. 2016 Dec;590(24):4472-4479. doi: 10.1002/1873-3468.12489. Epub 2016 Dec 16.

18.

Unconventional secretory processing diversifies neuronal ion channel properties.

Hanus C, Geptin H, Tushev G, Garg S, Alvarez-Castelao B, Sambandan S, Kochen L, Hafner AS, Langer JD, Schuman EM.

Elife. 2016 Sep 28;5. pii: e20609. doi: 10.7554/eLife.20609.

19.

Nascent Proteome Remodeling following Homeostatic Scaling at Hippocampal Synapses.

Schanzenbächer CT, Sambandan S, Langer JD, Schuman EM.

Neuron. 2016 Oct 19;92(2):358-371. doi: 10.1016/j.neuron.2016.09.058.

20.

Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases.

Safarian S, Rajendran C, Müller H, Preu J, Langer JD, Ovchinnikov S, Hirose T, Kusumoto T, Sakamoto J, Michel H.

Science. 2016 Apr 29;352(6285):583-6. doi: 10.1126/science.aaf2477.

21.

Cell-free synthesis of isotopically labelled peptide ligands for the functional characterization of G protein-coupled receptors.

Joedicke L, Trenker R, Langer JD, Michel H, Preu J.

FEBS Open Bio. 2015 Dec 29;6(1):90-102. doi: 10.1002/2211-5463.12008. eCollection 2016 Jan.

22.

Identification and Characterization of the Novel Subunit CcoM in the cbb3₃Cytochrome c Oxidase from Pseudomonas stutzeri ZoBell.

Kohlstaedt M, Buschmann S, Xie H, Resemann A, Warkentin E, Langer JD, Michel H.

MBio. 2016 Jan 26;7(1):e01921-15. doi: 10.1128/mBio.01921-15.

23.
24.

Stoichiometry and deletion analyses of subunits in the heterotrimeric F-ATP synthase c ring from the acetogenic bacterium Acetobacterium woodii.

Brandt K, Müller DB, Hoffmann J, Langer JD, Brutschy B, Morgner N, Müller V.

FEBS J. 2016 Feb;283(3):510-20. doi: 10.1111/febs.13606. Epub 2015 Dec 24.

25.

Structure of the mycobacterial ATP synthase Fo rotor ring in complex with the anti-TB drug bedaquiline.

Preiss L, Langer JD, Yildiz Ö, Eckhardt-Strelau L, Guillemont JE, Koul A, Meier T.

Sci Adv. 2015 May 8;1(4):e1500106. doi: 10.1126/sciadv.1500106. eCollection 2015 May.

26.

Inhibition of Histone Deacetylases Permits Lipopolysaccharide-Mediated Secretion of Bioactive IL-1β via a Caspase-1-Independent Mechanism.

Stammler D, Eigenbrod T, Menz S, Frick JS, Sweet MJ, Shakespear MR, Jantsch J, Siegert I, Wölfle S, Langer JD, Oehme I, Schaefer L, Fischer A, Knievel J, Heeg K, Dalpke AH, Bode KA.

J Immunol. 2015 Dec 1;195(11):5421-31. doi: 10.4049/jimmunol.1501195. Epub 2015 Oct 30.

27.

Heterotrimeric NADH-oxidizing methylenetetrahydrofolate reductase from the acetogenic bacterium Acetobacterium woodii.

Bertsch J, Öppinger C, Hess V, Langer JD, Müller V.

J Bacteriol. 2015 May;197(9):1681-9. doi: 10.1128/JB.00048-15. Epub 2015 Mar 2.

28.

Na+ transport by the A1AO-ATP synthase purified from Thermococcus onnurineus and reconstituted into liposomes.

Mayer F, Lim JK, Langer JD, Kang SG, Müller V.

J Biol Chem. 2015 Mar 13;290(11):6994-7002. doi: 10.1074/jbc.M114.616862. Epub 2015 Jan 15.

29.

The c-ring ion binding site of the ATP synthase from Bacillus pseudofirmus OF4 is adapted to alkaliphilic lifestyle.

Preiss L, Langer JD, Hicks DB, Liu J, Yildiz O, Krulwich TA, Meier T.

Mol Microbiol. 2014 Jun;92(5):973-84. doi: 10.1111/mmi.12605. Epub 2014 Apr 24.

30.

Three multihaem cytochromes c from the hyperthermophilic archaeon Ignicoccus hospitalis: purification, properties and localization.

Naß B, Pöll U, Langer JD, Kreuter L, Küper U, Flechsler J, Heimerl T, Rachel R, Huber H, Kletzin A.

Microbiology. 2014 Jun;160(Pt 6):1278-89. doi: 10.1099/mic.0.077792-0. Epub 2014 Apr 4.

PMID:
24705227
31.

Biochemical and biophysical characterization of the two isoforms of cbb3-type cytochrome c oxidase from Pseudomonas stutzeri.

Xie H, Buschmann S, Langer JD, Ludwig B, Michel H.

J Bacteriol. 2014 Jan;196(2):472-82. doi: 10.1128/JB.01072-13. Epub 2013 Nov 8.

32.

Production of fully assembled and active Aquifex aeolicus F1FO ATP synthase in Escherichia coli.

Zhang C, Allegretti M, Vonck J, Langer JD, Marcia M, Peng G, Michel H.

Biochim Biophys Acta. 2014 Jan;1840(1):34-40. doi: 10.1016/j.bbagen.2013.08.023. Epub 2013 Sep 1.

PMID:
24005236
33.

Role of the N-terminal signal peptide in the membrane insertion of Aquifex aeolicus F1F0 ATP synthase c-subunit.

Zhang C, Marcia M, Langer JD, Peng G, Michel H.

FEBS J. 2013 Jul;280(14):3425-35. doi: 10.1111/febs.12336. Epub 2013 Jun 20.

34.

A c subunit with four transmembrane helices and one ion (Na+)-binding site in an archaeal ATP synthase: implications for c ring function and structure.

Mayer F, Leone V, Langer JD, Faraldo-Gómez JD, Müller V.

J Biol Chem. 2012 Nov 16;287(47):39327-37. doi: 10.1074/jbc.M112.411223. Epub 2012 Sep 24.

35.

Isolation, functional characterization and crystallization of Aq_1259, an outer membrane protein with porin features, from Aquifex aeolicus.

Wang T, Langer JD, Peng G, Michel H.

Biochim Biophys Acta. 2012 Dec;1824(12):1358-65. doi: 10.1016/j.bbapap.2012.07.004. Epub 2012 Jul 24.

PMID:
22842195
36.

Engineering rotor ring stoichiometries in the ATP synthase.

Pogoryelov D, Klyszejko AL, Krasnoselska GO, Heller EM, Leone V, Langer JD, Vonck J, Müller DJ, Faraldo-Gómez JD, Meier T.

Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):E1599-608. doi: 10.1073/pnas.1120027109. Epub 2012 May 24.

37.

Unusual N-terminal ααβαββα fold of PilQ from Thermus thermophilus mediates ring formation and is essential for piliation.

Burkhardt J, Vonck J, Langer JD, Salzer R, Averhoff B.

J Biol Chem. 2012 Mar 9;287(11):8484-94. doi: 10.1074/jbc.M111.334912. Epub 2012 Jan 17.

38.

Several ADP-ribosylation factor (Arf) isoforms support COPI vesicle formation.

Popoff V, Langer JD, Reckmann I, Hellwig A, Kahn RA, Brügger B, Wieland FT.

J Biol Chem. 2011 Oct 14;286(41):35634-42. doi: 10.1074/jbc.M111.261800. Epub 2011 Aug 15.

39.

Genetic analysis of MA4079, an aldehyde dehydrogenase homolog, in Methanosarcina acetivorans.

Kliefoth M, Langer JD, Matschiavelli N, Oelgeschläger E, Rother M.

Arch Microbiol. 2012 Feb;194(2):75-85. doi: 10.1007/s00203-011-0727-4. Epub 2011 Jul 7.

PMID:
21735228
40.

Microscopic rotary mechanism of ion translocation in the F(o) complex of ATP synthases.

Pogoryelov D, Krah A, Langer JD, Yildiz Ö, Faraldo-Gómez JD, Meier T.

Nat Chem Biol. 2010 Dec;6(12):891-9. doi: 10.1038/nchembio.457. Epub 2010 Oct 24.

PMID:
20972431
41.

Characterizing a monotopic membrane enzyme. Biochemical, enzymatic and crystallization studies on Aquifex aeolicus sulfide:quinone oxidoreductase.

Marcia M, Langer JD, Parcej D, Vogel V, Peng G, Michel H.

Biochim Biophys Acta. 2010 Nov;1798(11):2114-23. doi: 10.1016/j.bbamem.2010.07.033. Epub 2010 Aug 4.

42.

The structure of cbb3 cytochrome oxidase provides insights into proton pumping.

Buschmann S, Warkentin E, Xie H, Langer JD, Ermler U, Michel H.

Science. 2010 Jul 16;329(5989):327-30. doi: 10.1126/science.1187303. Epub 2010 Jun 24.

43.

Structural and energetic basis for H+ versus Na+ binding selectivity in ATP synthase Fo rotors.

Krah A, Pogoryelov D, Langer JD, Bond PJ, Meier T, Faraldo-Gómez JD.

Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):763-72. doi: 10.1016/j.bbabio.2010.04.014. Epub 2010 Apr 21.

44.

A conformational change in the alpha-subunit of coatomer induced by ligand binding to gamma-COP revealed by single-pair FRET.

Langer JD, Roth CM, Béthune J, Stoops EH, Brügger B, Herten DP, Wieland FT.

Traffic. 2008 Apr;9(4):597-607. doi: 10.1111/j.1600-0854.2007.00697.x. Epub 2007 Dec 25.

45.

Conformational changes of coat proteins during vesicle formation.

Langer JD, Stoops EH, Béthune J, Wieland FT.

FEBS Lett. 2007 May 22;581(11):2083-8. Epub 2007 Mar 15. Review.

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