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Items: 1 to 50 of 199

1.

Brain structure segmentation in the presence of multiple sclerosis lesions.

González-Villà S, Oliver A, Huo Y, Lladó X, Landman BA.

Neuroimage Clin. 2019 Feb 14;22:101709. doi: 10.1016/j.nicl.2019.101709. [Epub ahead of print]

2.

Acceleration of spleen segmentation with end-to-end deep learning method and automated pipeline.

Moon H, Huo Y, Abramson RG, Peters RA, Assad A, Moyo TK, Savona MR, Landman BA.

Comput Biol Med. 2019 Feb 5;107:109-117. doi: 10.1016/j.compbiomed.2019.01.018. [Epub ahead of print]

PMID:
30798219
3.

Correction to: Collaborative and Reproducible Research: Goals, Challenges, and Strategies.

Langer SG, Shih G, Nagy P, Landman BA.

J Digit Imaging. 2019 Feb 15. doi: 10.1007/s10278-018-0164-x. [Epub ahead of print]

PMID:
30771051
4.

White matter microstructure correlates of general and specific second-order factors of psychopathology.

Hinton KE, Lahey BB, Villalta-Gil V, Meyer FAC, Burgess LL, Chodes LK, Applegate B, Van Hulle CA, Landman BA, Zald DH.

Neuroimage Clin. 2019 Feb 1;22:101705. doi: 10.1016/j.nicl.2019.101705. [Epub ahead of print]

5.

Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2019 Jan 30;10(1):588. doi: 10.1038/s41467-019-08563-w.

6.

A fiber coherence index for quality control of B-table orientation in diffusion MRI scans.

Schilling KG, Yeh FC, Nath V, Hansen C, Williams O, Resnick S, Anderson AW, Landman BA.

Magn Reson Imaging. 2019 May;58:82-89. doi: 10.1016/j.mri.2019.01.018. Epub 2019 Jan 22.

PMID:
30682379
7.

Electronic Medical Record Context Signatures Improve Diagnostic Classification using Medical Image Computing.

Chaganti S, Mawn LA, Kang H, Egan J, Resnick SM, Beason-Held LL, Landman BA, Lasko T.

IEEE J Biomed Health Inform. 2018 Dec 28. doi: 10.1109/JBHI.2018.2890084. [Epub ahead of print]

PMID:
30602428
8.

Vascular burden and APOE ε4 are associated with white matter microstructural decline in cognitively normal older adults.

Williams OA, An Y, Beason-Held L, Huo Y, Ferrucci L, Landman BA, Resnick SM.

Neuroimage. 2019 Mar;188:572-583. doi: 10.1016/j.neuroimage.2018.12.009. Epub 2018 Dec 15.

PMID:
30557663
9.

Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2018 Dec 6;9(1):5217. doi: 10.1038/s41467-018-07619-7. Erratum in: Nat Commun. 2019 Jan 30;10(1):588.

10.

White matter differences between essential tremor and Parkinson disease.

Juttukonda MR, Franco G, Englot DJ, Lin YC, Petersen KJ, Trujillo P, Hedera P, Landman BA, Kang H, Donahue MJ, Konrad PE, Dawant BM, Claassen DO.

Neurology. 2019 Jan 1;92(1):e30-e39. doi: 10.1212/WNL.0000000000006694. Epub 2018 Nov 30.

PMID:
30504432
11.

Challenges in diffusion MRI tractography - Lessons learned from international benchmark competitions.

Schilling KG, Daducci A, Maier-Hein K, Poupon C, Houde JC, Nath V, Anderson AW, Landman BA, Descoteaux M.

Magn Reson Imaging. 2019 Apr;57:194-209. doi: 10.1016/j.mri.2018.11.014. Epub 2018 Nov 29.

PMID:
30503948
12.

Characterization and correlation of signal drift in diffusion weighted MRI.

Hansen CB, Nath V, Hainline AE, Schilling KG, Parvathaneni P, Bayrak RG, Blaber JA, Irfanoglu O, Pierpaoli C, Anderson AW, Rogers BP, Landman BA.

Magn Reson Imaging. 2019 Apr;57:133-142. doi: 10.1016/j.mri.2018.11.009. Epub 2018 Nov 22.

PMID:
30468766
13.

Tests of clustering thalamic nuclei based on various dMRI models in the squirrel monkey brain.

Gao Y, Schilling KG, Stepniewska I, Xu J, Landman BA, Dawant BM, Anderson AW.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10578. pii: 1057805. doi: 10.1117/12.2293879.

14.

Splenomegaly Segmentation on Multi-modal MRI using Deep Convolutional Networks.

Huo Y, Xu Z, Bao S, Bermudez C, Moon H, Parvathaneni P, Moyo TK, Savona MR, Assad A, Abramson RG, Landman BA.

IEEE Trans Med Imaging. 2018 Nov 13. doi: 10.1109/TMI.2018.2881110. [Epub ahead of print]

PMID:
30442602
15.

Intrinsic Functional Network Connectivity Is Associated With Clinical Symptoms and Cognition in Late-Life Depression.

Gandelman JA, Albert K, Boyd BD, Park JW, Riddle M, Woodward ND, Kang H, Landman BA, Taylor WD.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 Feb;4(2):160-170. doi: 10.1016/j.bpsc.2018.09.003. Epub 2018 Sep 21.

PMID:
30392844
16.

Structural covariance across the lifespan: Brain development and aging through the lens of inter-network relationships.

Aboud KS, Huo Y, Kang H, Ealey A, Resnick SM, Landman BA, Cutting LE.

Hum Brain Mapp. 2019 Jan;40(1):125-136. doi: 10.1002/hbm.24359. Epub 2018 Oct 3.

PMID:
30368995
17.

Automated Characterization of Body Composition and Frailty with Clinically Acquired CT.

Hu P, Huo Y, Kong D, Carr JJ, Abramson RG, Hartley KG, Landman BA.

Comput Methods Clin Appl Musculoskelet Imaging (2017). 2018;10734:25-35. doi: 10.1007/978-3-319-74113-0_3. Epub 2018 Jan 10.

18.

SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth.

Huo Y, Xu Z, Moon H, Bao S, Assad A, Moyo TK, Savona MR, Abramson RG, Landman BA.

IEEE Trans Med Imaging. 2018 Oct 17. doi: 10.1109/TMI.2018.2876633. [Epub ahead of print]

PMID:
30334788
19.

Limits to anatomical accuracy of diffusion tractography using modern approaches.

Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez EJ, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA.

Neuroimage. 2019 Jan 15;185:1-11. doi: 10.1016/j.neuroimage.2018.10.029. Epub 2018 Oct 11.

PMID:
30317017
20.

Functional tractography of white matter by high angular resolution functional-correlation imaging (HARFI).

Schilling KG, Gao Y, Li M, Wu TL, Blaber J, Landman BA, Anderson AW, Ding Z, Gore JC.

Magn Reson Med. 2019 Mar;81(3):2011-2024. doi: 10.1002/mrm.27512. Epub 2018 Sep 18.

PMID:
30277272
21.

Medial temporal lobe volumes in late-life depression: effects of age and vascular risk factors.

Taylor WD, Deng Y, Boyd BD, Donahue MJ, Albert K, McHugo M, Gandelman JA, Landman BA.

Brain Imaging Behav. 2018 Sep 24. doi: 10.1007/s11682-018-9969-y. [Epub ahead of print]

PMID:
30251182
22.

Glutamate-sensitive imaging and evaluation of cognitive impairment in multiple sclerosis.

O'Grady KP, Dula AN, Lyttle BD, Thompson LM, Conrad BN, Box BA, McKeithan LJ, Pawate S, Bagnato F, Landman BA, Newhouse P, Smith SA.

Mult Scler. 2018 Sep 19:1352458518799583. doi: 10.1177/1352458518799583. [Epub ahead of print]

PMID:
30230400
23.

Anatomical accuracy of standard-practice tractography algorithms in the motor system - A histological validation in the squirrel monkey brain.

Schilling KG, Gao Y, Stepniewska I, Janve V, Landman BA, Anderson AW.

Magn Reson Imaging. 2019 Jan;55:7-25. doi: 10.1016/j.mri.2018.09.004. Epub 2018 Sep 10.

PMID:
30213755
24.

Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images.

Carass A, Cuzzocreo JL, Han S, Hernandez-Castillo CR, Rasser PE, Ganz M, Beliveau V, Dolz J, Ben Ayed I, Desrosiers C, Thyreau B, Romero JE, Coupé P, Manjón JV, Fonov VS, Collins DL, Ying SH, Onyike CU, Crocetti D, Landman BA, Mostofsky SH, Thompson PM, Prince JL.

Neuroimage. 2018 Dec;183:150-172. doi: 10.1016/j.neuroimage.2018.08.003. Epub 2018 Aug 9.

PMID:
30099076
25.

A Web-Based Atlas Combining MRI and Histology of the Squirrel Monkey Brain.

Schilling KG, Gao Y, Christian M, Janve V, Stepniewska I, Landman BA, Anderson AW.

Neuroinformatics. 2019 Jan;17(1):131-145. doi: 10.1007/s12021-018-9391-z.

PMID:
30006920
26.

TRACE: A Topological Graph Representation for Automatic Sulcal Curve Extraction.

Lyu I, Kim SH, Woodward ND, Styner MA, Landman BA.

IEEE Trans Med Imaging. 2018 Jul;37(7):1653-1663. doi: 10.1109/TMI.2017.2787589.

PMID:
29969416
27.

Improved Stability of Whole Brain Surface Parcellation with Multi-Atlas Segmentation.

Huo Y, Bao S, Parvathaneni P, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 1057438. doi: 10.1117/12.2281509.

28.

A Data Colocation Grid Framework for Big Data Medical Image Processing: Backend Design.

Bao S, Huo Y, Parvathaneni P, Plassard AJ, Bermudez C, Yao Y, Lyu I, Gokhale A, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10597. pii: 105790A. doi: 10.1117/12.2293694.

29.

Splenomegaly Segmentation using Global Convolutional Kernels and Conditional Generative Adversarial Networks.

Huo Y, Xu Z, Bao S, Bermudez C, Plassard AJ, Liu J, Yao Y, Assad A, Abramson RG, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 1057409. doi: 10.1117/12.2293406.

30.

Fully Convolutional Neural Networks Improve Abdominal Organ Segmentation.

Bobo MF, Bao S, Huo Y, Yao Y, Virostko J, Plassard AJ, Lyu I, Assad A, Abramson RG, Hilmes MA, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 105742V. doi: 10.1117/12.2293751.

31.

Constructing Statistically Unbiased Cortical Surface Templates Using Feature-Space Covariance.

Parvathaneni P, Lyu I, Huo Y, Blaber J, Hainline AE, Kang H, Woodward ND, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 1057406. doi: 10.1117/12.2293641.

32.

Sulcal Depth-based Cortical Shape Analysis in Normal Healthy Control and Schizophrenia Groups.

Lyu I, Kang H, Woodward ND, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 1057402. doi: 10.1117/12.2293275.

33.

Evaluation of inter-site bias and variance in diffusion-weighted MRI.

Hainline AE, Nath V, Parvathaneni P, Blaber J, Rogers B, Newton A, Luci J, Edmonson H, Kang H, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 1057413. doi: 10.1117/12.2293735.

34.

SHARD: Spherical Harmonic-based Robust Outlier Detection for HARDI Methods.

Nath V, Schilling KG, Hainline AE, Parvathaneni P, Blaber JA, Lyu I, Anderson AW, Kang H, Newton AT, Rogers BP, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 105740X. doi: 10.1117/12.2293727.

35.

QUADRATIC: Quality of Dice in Registration Circuits.

Chaganti S, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 105740P. doi: 10.1117/12.2293642.

36.

Learning Implicit Brain MRI Manifolds with Deep Learning.

Bermudez C, Plassard AJ, Davis TL, Newton AT, Resnick SM, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10574. pii: 105741L. doi: 10.1117/12.2293515.

37.

Phantom-based field maps for gradient nonlinearity correction in diffusion imaging.

Rogers BP, Blaber J, Newton AT, Hansen CB, Welch EB, Anderson AW, Luci JJ, Pierpaoli C, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10573. pii: 105733N. doi: 10.1117/12.2293786.

38.

Assessing the inter-observer variability of Computer-Aided Nodule Assessment and Risk Yield (CANARY) to characterize lung adenocarcinomas.

Nakajima EC, Frankland MP, Johnson TF, Antic SL, Chen H, Chen SC, Karwoski RA, Walker R, Landman BA, Clay RD, Bartholmai BJ, Rajagopalan S, Peikert T, Massion PP, Maldonado F.

PLoS One. 2018 Jun 1;13(6):e0198118. doi: 10.1371/journal.pone.0198118. eCollection 2018.

39.

Relating structural and functional brainstem connectivity to disease measures in epilepsy.

Englot DJ, Gonzalez HFJ, Reynolds BB, Konrad PE, Jacobs ML, Gore JC, Landman BA, Morgan VL.

Neurology. 2018 Jul 3;91(1):e67-e77. doi: 10.1212/WNL.0000000000005733. Epub 2018 May 30.

PMID:
29848786
40.

Towards Portable Large-Scale Image Processing with High-Performance Computing.

Huo Y, Blaber J, Damon SM, Boyd BD, Bao S, Parvathaneni P, Noguera CB, Chaganti S, Nath V, Greer JM, Lyu I, French WR, Newton AT, Rogers BP, Landman BA.

J Digit Imaging. 2018 Jun;31(3):304-314. doi: 10.1007/s10278-018-0080-0. Review.

41.

Right Fronto-Subcortical White Matter Microstructure Predicts Cognitive Control Ability on the Go/No-go Task in a Community Sample.

Hinton KE, Lahey BB, Villalta-Gil V, Boyd BD, Yvernault BC, Werts KB, Plassard AJ, Applegate B, Woodward ND, Landman BA, Zald DH.

Front Hum Neurosci. 2018 Apr 13;12:127. doi: 10.3389/fnhum.2018.00127. eCollection 2018.

42.

Empirical estimation of intravoxel structure with persistent angular structure and Q-ball models of diffusion weighted MRI.

Nath V, Schilling KG, Parvathaneni P, Blaber J, Hainline AE, Ding Z, Anderson A, Landman BA.

J Med Imaging (Bellingham). 2018 Jan;5(1):014005. doi: 10.1117/1.JMI.5.1.014005. Epub 2018 Mar 6.

43.

Empirical reproducibility, sensitivity, and optimization of acquisition protocol, for Neurite Orientation Dispersion and Density Imaging using AMICO.

Parvathaneni P, Nath V, Blaber JA, Schilling KG, Hainline AE, Mojahed E, Anderson AW, Landman BA.

Magn Reson Imaging. 2018 Jul;50:96-109. doi: 10.1016/j.mri.2018.03.004. Epub 2018 Mar 8.

PMID:
29526642
44.

Collaborative and Reproducible Research: Goals, Challenges, and Strategies.

Langer SG, Shih G, Nagy P, Landman BA.

J Digit Imaging. 2018 Jun;31(3):275-282. doi: 10.1007/s10278-017-0043-x. Erratum in: J Digit Imaging. 2019 Feb 15;:.

PMID:
29476392
45.

Empirical single sample quantification of bias and variance in Q-ball imaging.

Hainline AE, Nath V, Parvathaneni P, Blaber JA, Schilling KG, Anderson AW, Kang H, Landman BA.

Magn Reson Med. 2018 Oct;80(4):1666-1675. doi: 10.1002/mrm.27115. Epub 2018 Feb 6.

PMID:
29411435
46.

4D Multi-atlas Label Fusion using Longitudinal Images.

Huo Y, Resnick SM, Landman BA.

Patch Based Tech Med Imaging (2017). 2017;10530:3-11. doi: 10.1007/978-3-319-67434-6_1. Epub 2017 Aug 31.

47.

EMR-Radiological Phenotypes in Diseases of the Optic Nerve and their Association with Visual Function.

Chaganti S, Robinson JR, Bermudez C, Lasko T, Mawn LA, Landman BA.

Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2017). 2017;2017:373-381. doi: 10.1007/978-3-319-67558-9_43. Epub 2017 Sep 9.

48.

Robust Multicontrast MRI Spleen Segmentation for Splenomegaly Using Multi-Atlas Segmentation.

Huo Y, Liu J, Xu Z, Harrigan RL, Assad A, Abramson RG, Landman BA.

IEEE Trans Biomed Eng. 2018 Feb;65(2):336-343. doi: 10.1109/TBME.2017.2764752.

49.

Confirmation of a gyral bias in diffusion MRI fiber tractography.

Schilling K, Gao Y, Janve V, Stepniewska I, Landman BA, Anderson AW.

Hum Brain Mapp. 2018 Mar;39(3):1449-1466. doi: 10.1002/hbm.23936. Epub 2017 Dec 19.

50.

Gray Matter Surface based Spatial Statistics (GS-BSS) in Diffusion Microstructure.

Parvathaneni P, Rogers BP, Huo Y, Schilling KG, Hainline AE, Anderson AW, Woodward ND, Landman BA.

Med Image Comput Comput Assist Interv. 2017 Sep;10433:638-646. doi: 10.1007/978-3-319-66182-7_73. Epub 2017 Sep 4.

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