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Items: 1 to 50 of 231

1.

Effects of acute and chronic heat stress on the performance, egg quality, body temperature, and blood gas parameters of laying hens.

Barrett NW, Rowland K, Schmidt CJ, Lamont SJ, Rothschild MF, Ashwell CM, Persia ME.

Poult Sci. 2019 Oct 1. pii: pez541. doi: 10.3382/ps/pez541. [Epub ahead of print]

PMID:
31573614
2.

Variant analysis pipeline for accurate detection of genomic variants from transcriptome sequencing data.

Adetunji MO, Lamont SJ, Abasht B, Schmidt CJ.

PLoS One. 2019 Sep 23;14(9):e0216838. doi: 10.1371/journal.pone.0216838. eCollection 2019.

3.

Genetic lines respond uniquely within the chicken thymic transcriptome to acute heat stress and low dose lipopolysaccharide.

Monson MS, Van Goor AG, Persia ME, Rothschild MF, Schmidt CJ, Lamont SJ.

Sci Rep. 2019 Sep 20;9(1):13649. doi: 10.1038/s41598-019-50051-0.

4.

Genetic Analyses of Tanzanian Local Chicken Ecotypes Challenged with Newcastle Disease Virus.

Walugembe M, Mushi JR, Amuzu-Aweh EN, Chiwanga GH, Msoffe PL, Wang Y, Saelao P, Kelly T, Gallardo RA, Zhou H, Lamont SJ, Muhairwa AP, Dekkers JCM.

Genes (Basel). 2019 Jul 17;10(7). pii: E546. doi: 10.3390/genes10070546.

5.

Genetic analysis of production, physiological, and egg quality traits in heat-challenged commercial white egg-laying hens using 600k SNP array data.

Rowland K, Ashwell CM, Persia ME, Rothschild MF, Schmidt C, Lamont SJ.

Genet Sel Evol. 2019 Jun 25;51(1):31. doi: 10.1186/s12711-019-0474-6.

6.

Natural Selection Footprints Among African Chicken Breeds and Village Ecotypes.

Elbeltagy AR, Bertolini F, Fleming DS, Van Goor A, Ashwell CM, Schmidt CJ, Kugonza DR, Lamont SJ, Rothschild MF.

Front Genet. 2019 May 8;10:376. doi: 10.3389/fgene.2019.00376. eCollection 2019.

7.

Conserved, breed-dependent, and subline-dependent innate immune responses of Fayoumi and Leghorn chicken embryos to Newcastle disease virus infection.

Schilling MA, Memari S, Cavanaugh M, Katani R, Deist MS, Radzio-Basu J, Lamont SJ, Buza JJ, Kapur V.

Sci Rep. 2019 May 10;9(1):7209. doi: 10.1038/s41598-019-43483-1.

8.

Venous blood gas and chemistry components are moderately heritable in commercial white egg-laying hens under acute or chronic heat exposure.

Rowland K, Persia ME, Rothschild MF, Schmidt C, Lamont SJ.

Poult Sci. 2019 Sep 1;98(9):3426-3430. doi: 10.3382/ps/pez204.

9.

Detection of Selection Signatures Among Brazilian, Sri Lankan, and Egyptian Chicken Populations Under Different Environmental Conditions.

Walugembe M, Bertolini F, Dematawewa CMB, Reis MP, Elbeltagy AR, Schmidt CJ, Lamont SJ, Rothschild MF.

Front Genet. 2019 Jan 14;9:737. doi: 10.3389/fgene.2018.00737. eCollection 2018.

10.

Genetics and Genomic Regions Affecting Response to Newcastle Disease Virus Infection under Heat Stress in Layer Chickens.

Saelao P, Wang Y, Chanthavixay G, Gallardo RA, Wolc A, Dekkers JCM, Lamont SJ, Kelly T, Zhou H.

Genes (Basel). 2019 Jan 18;10(1). pii: E61. doi: 10.3390/genes10010061.

11.

RNA-Seq Analyses Identify Additivity as the Predominant Gene Expression Pattern in F1 Chicken Embryonic Brain and Liver.

Zhuo Z, Lamont SJ, Abasht B.

Genes (Basel). 2019 Jan 7;10(1). pii: E27. doi: 10.3390/genes10010027.

12.

Distinct genes and pathways associated with transcriptome differences in early cardiac development between fast- and slow-growing broilers.

Zhang J, Schmidt CJ, Lamont SJ.

PLoS One. 2018 Dec 5;13(12):e0207715. doi: 10.1371/journal.pone.0207715. eCollection 2018.

13.

Integrated Proteomic and Transcriptomic Analysis of Differential Expression of Chicken Lung Tissue in Response to NDV Infection during Heat Stress.

Saelao P, Wang Y, Chanthavixay G, Yu V, Gallardo RA, Dekkers JCM, Lamont SJ, Kelly T, Zhou H.

Genes (Basel). 2018 Nov 27;9(12). pii: E579. doi: 10.3390/genes9120579.

14.

Association of Candidate Genes with Response to Heat and Newcastle Disease Virus.

Rowland K, Saelao P, Wang Y, Fulton JE, Liebe GN, McCarron AM, Wolc A, Gallardo RA, Kelly T, Zhou H, Dekkers JCM, Lamont SJ.

Genes (Basel). 2018 Nov 19;9(11). pii: E560. doi: 10.3390/genes9110560.

15.

Identifying mechanisms of regulation to model carbon flux during heat stress and generate testable hypotheses.

Hubbard AH, Zhang X, Jastrebski S, Lamont SJ, Singh A, Schmidt CJ.

PLoS One. 2018 Oct 26;13(10):e0205824. doi: 10.1371/journal.pone.0205824. eCollection 2018.

16.

Novel insights into the host immune response of chicken Harderian gland tissue during Newcastle disease virus infection and heat treatment.

Saelao P, Wang Y, Gallardo RA, Lamont SJ, Dekkers JM, Kelly T, Zhou H.

BMC Vet Res. 2018 Sep 12;14(1):280. doi: 10.1186/s12917-018-1583-0.

17.

Genetic Analysis of a Commercial Egg Laying Line Challenged With Newcastle Disease Virus.

Rowland K, Wolc A, Gallardo RA, Kelly T, Zhou H, Dekkers JCM, Lamont SJ.

Front Genet. 2018 Aug 20;9:326. doi: 10.3389/fgene.2018.00326. eCollection 2018.

18.

Immunomodulatory effects of heat stress and lipopolysaccharide on the bursal transcriptome in two distinct chicken lines.

Monson MS, Van Goor AG, Ashwell CM, Persia ME, Rothschild MF, Schmidt CJ, Lamont SJ.

BMC Genomics. 2018 Aug 30;19(1):643. doi: 10.1186/s12864-018-5033-y.

19.

Differential expression of intestinal nutrient transporters and host defense peptides in Eimeria maxima-infected Fayoumi and Ross chickens.

Su S, Miska KB, Fetterer RH, Jenkins MC, Lamont SJ, Wong EA.

Poult Sci. 2018 Dec 1;97(12):4392-4400. doi: 10.3382/ps/pey286.

PMID:
30007365
20.

What Makes the Harderian Gland Transcriptome Different From Other Chicken Immune Tissues? A Gene Expression Comparative Analysis.

Deist MS, Lamont SJ.

Front Physiol. 2018 May 8;9:492. doi: 10.3389/fphys.2018.00492. eCollection 2018.

21.

Novel analysis of the Harderian gland transcriptome response to Newcastle disease virus in two inbred chicken lines.

Deist MS, Gallardo RA, Bunn DA, Kelly TR, Dekkers JCM, Zhou H, Lamont SJ.

Sci Rep. 2018 Apr 26;8(1):6558. doi: 10.1038/s41598-018-24830-0.

22.

TransAtlasDB: an integrated database connecting expression data, metadata and variants.

Adetunji MO, Lamont SJ, Schmidt CJ.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay014.

23.

Transcriptional Innate Immune Response of the Developing Chicken Embryo to Newcastle Disease Virus Infection.

Schilling MA, Katani R, Memari S, Cavanaugh M, Buza J, Radzio-Basu J, Mpenda FN, Deist MS, Lamont SJ, Kapur V.

Front Genet. 2018 Feb 27;9:61. doi: 10.3389/fgene.2018.00061. eCollection 2018.

24.

Transcriptome Analysis in Spleen Reveals Differential Regulation of Response to Newcastle Disease Virus in Two Chicken Lines.

Zhang J, Kaiser MG, Deist MS, Gallardo RA, Bunn DA, Kelly TR, Dekkers JCM, Zhou H, Lamont SJ.

Sci Rep. 2018 Jan 19;8(1):1278. doi: 10.1038/s41598-018-19754-8.

25.

Resistant and susceptible chicken lines show distinctive responses to Newcastle disease virus infection in the lung transcriptome.

Deist MS, Gallardo RA, Bunn DA, Dekkers JCM, Zhou H, Lamont SJ.

BMC Genomics. 2017 Dec 28;18(1):989. doi: 10.1186/s12864-017-4380-4.

26.

Physiological responses to heat stress in two genetically distinct chicken inbred lines.

Wang Y, Saelao P, Chanthavixay K, Gallardo R, Bunn D, Lamont SJ, Dekkers JM, Kelly T, Zhou H.

Poult Sci. 2018 Mar 1;97(3):770-780. doi: 10.3382/ps/pex363.

PMID:
29267901
27.
28.

Chicken hepatic response to chronic heat stress using integrated transcriptome and metabolome analysis.

Jastrebski SF, Lamont SJ, Schmidt CJ.

PLoS One. 2017 Jul 31;12(7):e0181900. doi: 10.1371/journal.pone.0181900. eCollection 2017.

29.
30.

Integrated host and viral transcriptome analyses reveal pathology and inflammatory response mechanisms to ALV-J injection in SPF chickens.

Lan X, Wang Y, Tian K, Ye F, Yin H, Zhao X, Xu H, Huang Y, Liu H, Hsieh JC, Lamont SJ, Zhu Q.

Sci Rep. 2017 Apr 12;7:46156. doi: 10.1038/srep46156.

31.

Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection Pressure.

Fleming DS, Weigend S, Simianer H, Weigend A, Rothschild M, Schmidt C, Ashwell C, Persia M, Reecy J, Lamont SJ.

G3 (Bethesda). 2017 May 5;7(5):1525-1537. doi: 10.1534/g3.117.041228.

32.

Novel Mechanisms Revealed in the Trachea Transcriptome of Resistant and Susceptible Chicken Lines following Infection with Newcastle Disease Virus.

Deist MS, Gallardo RA, Bunn DA, Kelly TR, Dekkers JCM, Zhou H, Lamont SJ.

Clin Vaccine Immunol. 2017 May 5;24(5). pii: e00027-17. doi: 10.1128/CVI.00027-17. Print 2017 May.

33.

Unique genetic responses revealed in RNA-seq of the spleen of chickens stimulated with lipopolysaccharide and short-term heat.

Van Goor A, Ashwell CM, Persia ME, Rothschild MF, Schmidt CJ, Lamont SJ.

PLoS One. 2017 Feb 6;12(2):e0171414. doi: 10.1371/journal.pone.0171414. eCollection 2017.

34.

Liver transcriptome response to hyperthermic stress in three distinct chicken lines.

Lan X, Hsieh JC, Schmidt CJ, Zhu Q, Lamont SJ.

BMC Genomics. 2016 Nov 22;17(1):955.

35.

Transcriptomic changes throughout post-hatch development in Gallus gallus pituitary.

Pritchett EM, Lamont SJ, Schmidt CJ.

J Mol Endocrinol. 2017 Jan;58(1):43-55. Epub 2016 Nov 17.

36.

Duplication of chicken defensin7 gene generated by gene conversion and homologous recombination.

Lee MO, Bornelöv S, Andersson L, Lamont SJ, Chen J, Womack JE.

Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):13815-13820. Epub 2016 Nov 14.

37.

A short insertion mutation disrupts genesis of miR-16 and causes increased body weight in domesticated chicken.

Jia X, Lin H, Nie Q, Zhang X, Lamont SJ.

Sci Rep. 2016 Nov 3;6:36433. doi: 10.1038/srep36433.

38.

Novel MicroRNA Involved in Host Response to Avian Pathogenic Escherichia coli Identified by Deep Sequencing and Integration Analysis.

Jia X, Nie Q, Zhang X, Nolan LK, Lamont SJ.

Infect Immun. 2016 Dec 29;85(1). pii: e00688-16. doi: 10.1128/IAI.00688-16. Print 2017 Jan.

39.

Single nucleotide variant discovery of highly inbred Leghorn and Fayoumi chicken breeds using pooled whole genome resequencing data reveals insights into phenotype differences.

Fleming DS, Koltes JE, Fritz-Waters ER, Rothschild MF, Schmidt CJ, Ashwell CM, Persia ME, Reecy JM, Lamont SJ.

BMC Genomics. 2016 Oct 19;17(1):812.

40.

Tissue expression and antibacterial activity of host defense peptides in chicken.

Lee MO, Jang HJ, Rengaraj D, Yang SY, Han JY, Lamont SJ, Womack JE.

BMC Vet Res. 2016 Oct 13;12(1):231.

41.

Heat Stress and Lipopolysaccharide Stimulation of Chicken Macrophage-Like Cell Line Activates Expression of Distinct Sets of Genes.

Slawinska A, Hsieh JC, Schmidt CJ, Lamont SJ.

PLoS One. 2016 Oct 13;11(10):e0164575. doi: 10.1371/journal.pone.0164575. eCollection 2016.

42.

Thymus transcriptome reveals novel pathways in response to avian pathogenic Escherichia coli infection.

Sun H, Liu P, Nolan LK, Lamont SJ.

Poult Sci. 2016 Dec 1;95(12):2803-2814. Epub 2016 Jul 27.

43.

Distinct functional responses to stressors of bone marrow derived dendritic cells from diverse inbred chicken lines.

Van Goor A, Slawinska A, Schmidt CJ, Lamont SJ.

Dev Comp Immunol. 2016 Oct;63:96-110. doi: 10.1016/j.dci.2016.05.016. Epub 2016 May 27.

44.

Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array.

Fleming DS, Koltes JE, Markey AD, Schmidt CJ, Ashwell CM, Rothschild MF, Persia ME, Reecy JM, Lamont SJ.

BMC Genomics. 2016 May 26;17:407. doi: 10.1186/s12864-016-2711-5.

45.

Quantitative trait loci identified for blood chemistry components of an advanced intercross line of chickens under heat stress.

Van Goor A, Ashwell CM, Persia ME, Rothschild MF, Schmidt CJ, Lamont SJ.

BMC Genomics. 2016 Apr 14;17:287. doi: 10.1186/s12864-016-2601-x.

46.

Comparing the immune responses of two genetically B-complex disparate Fayoumi chicken lines to Eimeria tenella.

Lee SH, Dong X, Lillehoj HS, Lamont SJ, Suo X, Kim DK, Lee KW, Hong YH.

Br Poult Sci. 2016 Apr;57(2):165-71. doi: 10.1080/00071668.2016.1141172.

PMID:
26942865
47.

Combined analysis of primary lymphoid tissues' transcriptomic response to extra-intestinal Escherichia coli (ExPEC) infection.

Sun H, Bi R, Liu P, Nolan LK, Lamont SJ.

Dev Comp Immunol. 2016 Apr;57:99-106. doi: 10.1016/j.dci.2015.12.013. Epub 2015 Dec 19.

48.

Identification of quantitative trait loci for body temperature, body weight, breast yield, and digestibility in an advanced intercross line of chickens under heat stress.

Van Goor A, Bolek KJ, Ashwell CM, Persia ME, Rothschild MF, Schmidt CJ, Lamont SJ.

Genet Sel Evol. 2015 Dec 17;47:96. doi: 10.1186/s12711-015-0176-7.

49.

Novel Pathways Revealed in Bursa of Fabricius Transcriptome in Response to Extraintestinal Pathogenic Escherichia coli (ExPEC) Infection.

Sun H, Liu P, Nolan LK, Lamont SJ.

PLoS One. 2015 Nov 10;10(11):e0142570. doi: 10.1371/journal.pone.0142570. eCollection 2015.

50.

Genome-wide DNA methylome variation in two genetically distinct chicken lines using MethylC-seq.

Li J, Li R, Wang Y, Hu X, Zhao Y, Li L, Feng C, Gu X, Liang F, Lamont SJ, Hu S, Zhou H, Li N.

BMC Genomics. 2015 Oct 23;16:851. doi: 10.1186/s12864-015-2098-8.

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