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Items: 14

1.

Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution.

Lamichhaney S, Card DC, Grayson P, Tonini JFR, Bravo GA, Näpflin K, Termignoni-Garcia F, Torres C, Burbrink F, Clarke JA, Sackton TB, Edwards SV.

Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20180248. doi: 10.1098/rstb.2018.0248. Epub 2019 Jun 3.

PMID:
31154982
2.

A comparison of the association between large haplotype blocks under selection and the presence/absence of inversions.

Lamichhaney S, Andersson L.

Ecol Evol. 2019 Mar 27;9(8):4888-4896. doi: 10.1002/ece3.5094. eCollection 2019 Apr.

3.

Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics.

Bravo GA, Antonelli A, Bacon CD, Bartoszek K, Blom MPK, Huynh S, Jones G, Knowles LL, Lamichhaney S, Marcussen T, Morlon H, Nakhleh LK, Oxelman B, Pfeil B, Schliep A, Wahlberg N, Werneck FP, Wiedenhoeft J, Willows-Munro S, Edwards SV.

PeerJ. 2019 Feb 14;7:e6399. doi: 10.7717/peerj.6399. eCollection 2019.

4.

Rapid hybrid speciation in Darwin's finches.

Lamichhaney S, Han F, Webster MT, Andersson L, Grant BR, Grant PR.

Science. 2018 Jan 12;359(6372):224-228. doi: 10.1126/science.aao4593. Epub 2017 Nov 23.

PMID:
29170277
5.

Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate.

Feng C, Pettersson M, Lamichhaney S, Rubin CJ, Rafati N, Casini M, Folkvord A, Andersson L.

Elife. 2017 Jun 30;6. pii: e23907. doi: 10.7554/eLife.23907.

6.

Gene flow, ancient polymorphism, and ecological adaptation shape the genomic landscape of divergence among Darwin's finches.

Han F, Lamichhaney S, Grant BR, Grant PR, Andersson L, Webster MT.

Genome Res. 2017 Jun;27(6):1004-1015. doi: 10.1101/gr.212522.116. Epub 2017 Apr 25.

7.

Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean.

Lamichhaney S, Fuentes-Pardo AP, Rafati N, Ryman N, McCracken GR, Bourne C, Singh R, Ruzzante DE, Andersson L.

Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):E3452-E3461. doi: 10.1073/pnas.1617728114. Epub 2017 Apr 7.

8.

The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing.

Martinez Barrio A, Lamichhaney S, Fan G, Rafati N, Pettersson M, Zhang H, Dainat J, Ekman D, Höppner M, Jern P, Martin M, Nystedt B, Liu X, Chen W, Liang X, Shi C, Fu Y, Ma K, Zhan X, Feng C, Gustafson U, Rubin CJ, Sällman Almén M, Blass M, Casini M, Folkvord A, Laikre L, Ryman N, Ming-Yuen Lee S, Xu X, Andersson L.

Elife. 2016 May 3;5. pii: e12081. doi: 10.7554/eLife.12081.

9.

A beak size locus in Darwin's finches facilitated character displacement during a drought.

Lamichhaney S, Han F, Berglund J, Wang C, Almén MS, Webster MT, Grant BR, Grant PR, Andersson L.

Science. 2016 Apr 22;352(6284):470-4. doi: 10.1126/science.aad8786.

10.

Adaptive radiation of Darwin's finches revisited using whole genome sequencing.

Almén MS, Lamichhaney S, Berglund J, Grant BR, Grant PR, Webster MT, Andersson L.

Bioessays. 2016 Jan;38(1):14-20. doi: 10.1002/bies.201500079. Epub 2015 Nov 25. Review.

PMID:
26606649
11.

Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene.

Saenko SV, Lamichhaney S, Martinez Barrio A, Rafati N, Andersson L, Milinkovitch MC.

Sci Rep. 2015 Nov 24;5:17118. doi: 10.1038/srep17118.

12.

Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax).

Lamichhaney S, Fan G, Widemo F, Gunnarsson U, Thalmann DS, Hoeppner MP, Kerje S, Gustafson U, Shi C, Zhang H, Chen W, Liang X, Huang L, Wang J, Liang E, Wu Q, Lee SM, Xu X, Höglund J, Liu X, Andersson L.

Nat Genet. 2016 Jan;48(1):84-8. doi: 10.1038/ng.3430. Epub 2015 Nov 16.

PMID:
26569123
13.

Evolution of Darwin's finches and their beaks revealed by genome sequencing.

Lamichhaney S, Berglund J, Almén MS, Maqbool K, Grabherr M, Martinez-Barrio A, Promerová M, Rubin CJ, Wang C, Zamani N, Grant BR, Grant PR, Webster MT, Andersson L.

Nature. 2015 Feb 19;518(7539):371-5. doi: 10.1038/nature14181. Epub 2015 Feb 11.

PMID:
25686609
14.

Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring.

Lamichhaney S, Martinez Barrio A, Rafati N, Sundström G, Rubin CJ, Gilbert ER, Berglund J, Wetterbom A, Laikre L, Webster MT, Grabherr M, Ryman N, Andersson L.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19345-50. doi: 10.1073/pnas.1216128109. Epub 2012 Nov 7.

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