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Items: 1 to 50 of 52

1.

Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).

Kryvokhyzha D, Salcedo A, Eriksson MC, Duan T, Tawari N, Chen J, Guerrina M, Kreiner JM, Kent TV, Lagercrantz U, Stinchcombe JR, Glémin S, Wright SI, Lascoux M.

PLoS Genet. 2019 Feb 15;15(2):e1007949. doi: 10.1371/journal.pgen.1007949. eCollection 2019 Feb.

2.

An Evolutionarily Conserved Abscisic Acid Signaling Pathway Regulates Dormancy in the Liverwort Marchantia polymorpha.

Eklund DM, Kanei M, Flores-Sandoval E, Ishizaki K, Nishihama R, Kohchi T, Lagercrantz U, Bhalerao RP, Sakata Y, Bowman JL.

Curr Biol. 2018 Nov 19;28(22):3691-3699.e3. doi: 10.1016/j.cub.2018.10.018. Epub 2018 Nov 8.

PMID:
30416060
3.

Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.

Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, Balasubrmanian S, Barry K, Bauer D, Boehm CR, Briginshaw L, Caballero-Perez J, Catarino B, Chen F, Chiyoda S, Chovatia M, Davies KM, Delmans M, Demura T, Dierschke T, Dolan L, Dorantes-Acosta AE, Eklund DM, Florent SN, Flores-Sandoval E, Fujiyama A, Fukuzawa H, Galik B, Grimanelli D, Grimwood J, Grossniklaus U, Hamada T, Haseloff J, Hetherington AJ, Higo A, Hirakawa Y, Hundley HN, Ikeda Y, Inoue K, Inoue SI, Ishida S, Jia Q, Kakita M, Kanazawa T, Kawai Y, Kawashima T, Kennedy M, Kinose K, Kinoshita T, Kohara Y, Koide E, Komatsu K, Kopischke S, Kubo M, Kyozuka J, Lagercrantz U, Lin SS, Lindquist E, Lipzen AM, Lu CW, De Luna E, Martienssen RA, Minamino N, Mizutani M, Mizutani M, Mochizuki N, Monte I, Mosher R, Nagasaki H, Nakagami H, Naramoto S, Nishitani K, Ohtani M, Okamoto T, Okumura M, Phillips J, Pollak B, Reinders A, Rövekamp M, Sano R, Sawa S, Schmid MW, Shirakawa M, Solano R, Spunde A, Suetsugu N, Sugano S, Sugiyama A, Sun R, Suzuki Y, Takenaka M, Takezawa D, Tomogane H, Tsuzuki M, Ueda T, Umeda M, Ward JM, Watanabe Y, Yazaki K, Yokoyama R, Yoshitake Y, Yotsui I, Zachgo S, Schmutz J.

Cell. 2017 Oct 5;171(2):287-304.e15. doi: 10.1016/j.cell.2017.09.030.

4.

Early evolution of the land plant circadian clock.

Linde AM, Eklund DM, Kubota A, Pederson ERA, Holm K, Gyllenstrand N, Nishihama R, Cronberg N, Muranaka T, Oyama T, Kohchi T, Lagercrantz U.

New Phytol. 2017 Oct;216(2):576-590. doi: 10.1111/nph.14487. Epub 2017 Feb 28.

5.

Association mapping in Salix viminalis L. (Salicaceae) - identification of candidate genes associated with growth and phenology.

Hallingbäck HR, Fogelqvist J, Powers SJ, Turrion-Gomez J, Rossiter R, Amey J, Martin T, Weih M, Gyllenstrand N, Karp A, Lagercrantz U, Hanley SJ, Berlin S, Rönnberg-Wästljung AC.

Glob Change Biol Bioenergy. 2016 May;8(3):670-685. Epub 2015 Jul 29.

6.

The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae).

Kryvokhyzha D, Holm K, Chen J, Cornille A, Glémin S, Wright SI, Lagercrantz U, Lascoux M.

Mol Ecol. 2016 Mar;25(5):1106-21. doi: 10.1111/mec.13537. Epub 2016 Feb 16.

PMID:
26797895
7.

Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha.

Eklund DM, Ishizaki K, Flores-Sandoval E, Kikuchi S, Takebayashi Y, Tsukamoto S, Hirakawa Y, Nonomura M, Kato H, Kouno M, Bhalerao RP, Lagercrantz U, Kasahara H, Kohchi T, Bowman JL.

Plant Cell. 2015 Jun;27(6):1650-69. doi: 10.1105/tpc.15.00065. Epub 2015 Jun 2. Erratum in: Plant Cell. 2016 Jan;28(1):266.

8.

Neofunctionalization of duplicated Tic40 genes caused a gain-of-function variation related to male fertility in Brassica oleracea lineages.

Dun X, Shen W, Hu K, Zhou Z, Xia S, Wen J, Yi B, Shen J, Ma C, Tu J, Fu T, Lagercrantz U.

Plant Physiol. 2014 Nov;166(3):1403-19. doi: 10.1104/pp.114.246470. Epub 2014 Sep 2.

9.

Association of FLOWERING LOCUS T/TERMINAL FLOWER 1-like gene FTL2 expression with growth rhythm in Scots pine (Pinus sylvestris).

Avia K, Kärkkäinen K, Lagercrantz U, Savolainen O.

New Phytol. 2014 Oct;204(1):159-70. doi: 10.1111/nph.12901. Epub 2014 Jun 18.

10.

Patterns of nucleotide diversity at photoperiod related genes in Norway spruce [Picea abies (L.) Karst].

Källman T, De Mita S, Larsson H, Gyllenstrand N, Heuertz M, Parducci L, Suyama Y, Lagercrantz U, Lascoux M.

PLoS One. 2014 May 8;9(5):e95306. doi: 10.1371/journal.pone.0095306. eCollection 2014.

11.

Genetic architecture of spring and autumn phenology in Salix.

Ghelardini L, Berlin S, Weih M, Lagercrantz U, Gyllenstrand N, Rönnberg-Wästljung AC.

BMC Plant Biol. 2014 Jan 17;14:31. doi: 10.1186/1471-2229-14-31.

12.

No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst).

Gyllenstrand N, Karlgren A, Clapham D, Holm K, Hall A, Gould PD, Källman T, Lagercrantz U.

Plant Cell Physiol. 2014 Mar;55(3):535-50. doi: 10.1093/pcp/pct199. Epub 2013 Dec 19.

PMID:
24363286
13.

FLOWERING LOCUS T/TERMINAL FLOWER1-like genes affect growth rhythm and bud set in Norway spruce.

Karlgren A, Gyllenstrand N, Clapham D, Lagercrantz U.

Plant Physiol. 2013 Oct;163(2):792-803. doi: 10.1104/pp.113.224139. Epub 2013 Aug 19.

14.

A significant fraction of 21-nucleotide small RNA originates from phased degradation of resistance genes in several perennial species.

Källman T, Chen J, Gyllenstrand N, Lagercrantz U.

Plant Physiol. 2013 Jun;162(2):741-54. doi: 10.1104/pp.113.214643. Epub 2013 Apr 11.

15.

Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst).

Karlgren A, Gyllenstrand N, Källman T, Lagercrantz U.

PLoS One. 2013;8(3):e60110. doi: 10.1371/journal.pone.0060110. Epub 2013 Mar 28.

16.

Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms.

Chen J, Uebbing S, Gyllenstrand N, Lagercrantz U, Lascoux M, Källman T.

BMC Genomics. 2012 Nov 2;13:589. doi: 10.1186/1471-2164-13-589.

17.

Role of vernalization and of duplicated FLOWERING LOCUS C in the perennial Arabidopsis lyrata.

Kemi U, Niittyvuopio A, Toivainen T, Pasanen A, Quilot-Turion B, Holm K, Lagercrantz U, Savolainen O, Kuittinen H.

New Phytol. 2013 Jan;197(1):323-35. doi: 10.1111/j.1469-8137.2012.04378.x. Epub 2012 Oct 26.

18.

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies).

Chen J, Källman T, Ma X, Gyllenstrand N, Zaina G, Morgante M, Bousquet J, Eckert A, Wegrzyn J, Neale D, Lagercrantz U, Lascoux M.

Genetics. 2012 Jul;191(3):865-81. doi: 10.1534/genetics.112.140749. Epub 2012 Apr 27.

19.

Polymorphism and Divergence in Two Willow Species, Salix viminalis L. and Salix schwerinii E. Wolf.

Berlin S, Fogelqvist J, Lascoux M, Lagercrantz U, Rönnberg-Wästljung AC.

G3 (Bethesda). 2011 Oct;1(5):387-400. doi: 10.1534/g3.111.000539. Epub 2011 Oct 1.

20.

Evolution of the PEBP gene family in plants: functional diversification in seed plant evolution.

Karlgren A, Gyllenstrand N, Källman T, Sundström JF, Moore D, Lascoux M, Lagercrantz U.

Plant Physiol. 2011 Aug;156(4):1967-77. doi: 10.1104/pp.111.176206. Epub 2011 Jun 3.

21.

Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?

Holm K, Källman T, Gyllenstrand N, Hedman H, Lagercrantz U.

BMC Plant Biol. 2010 Jun 15;10:109. doi: 10.1186/1471-2229-10-109.

22.

High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus.

Berlin S, Lagercrantz U, von Arnold S, Ost T, Rönnberg-Wästljung AC.

BMC Genomics. 2010 Feb 23;11:129. doi: 10.1186/1471-2164-11-129.

23.

Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris.

Slotte T, Huang HR, Holm K, Ceplitis A, Onge KS, Chen J, Lagercrantz U, Lascoux M.

Genetics. 2009 Sep;183(1):337-45. doi: 10.1534/genetics.109.103705. Epub 2009 Jul 6.

24.

At the end of the day: a common molecular mechanism for photoperiod responses in plants?

Lagercrantz U.

J Exp Bot. 2009;60(9):2501-15. doi: 10.1093/jxb/erp139. Epub 2009 May 4. Review.

PMID:
19414498
25.

Non-radioactive in situ hybridization protocol applicable for Norway spruce and a range of plant species.

Karlgren A, Carlsson J, Gyllenstrand N, Lagercrantz U, Sundström JF.

J Vis Exp. 2009 Apr 17;(26). pii: 1205. doi: 10.3791/1205.

26.

Detection and quantification of Paenibacillus polymyxa in the rhizosphere of wild barley (Hordeum spontaneum) with real-time PCR.

Timmusk S, Paalme V, Lagercrantz U, Nevo E.

J Appl Microbiol. 2009 Sep;107(3):736-45. doi: 10.1111/j.1365-2672.2009.04265.x. Epub 2009 Mar 9.

27.

Early evolution of the MFT-like gene family in plants.

Hedman H, Källman T, Lagercrantz U.

Plant Mol Biol. 2009 Jul;70(4):359-69. doi: 10.1007/s11103-009-9478-x. Epub 2009 Mar 14.

PMID:
19288213
28.

Polymorphism and divergence at three duplicate genes in Brassica nigra.

Sjödin P, Hedman H, Kruskopf Osterberg M, Gustafsson S, Lagercrantz U, Lascoux M.

J Mol Evol. 2008 Jun;66(6):581-90. doi: 10.1007/s00239-008-9108-2. Epub 2008 May 10.

PMID:
18470551
29.

Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae).

Slotte T, Holm K, McIntyre LM, Lagercrantz U, Lascoux M.

Plant Physiol. 2007 Sep;145(1):160-73. Epub 2007 Jul 13.

30.

A Norway spruce FLOWERING LOCUS T homolog is implicated in control of growth rhythm in conifers.

Gyllenstrand N, Clapham D, Källman T, Lagercrantz U.

Plant Physiol. 2007 May;144(1):248-57. Epub 2007 Mar 16.

31.

Recent degeneration of an old duplicated flowering time gene in Brassica nigra.

Sjödin P, Hedman H, Shavorskaya O, Finet C, Lascoux M, Lagercrantz U.

Heredity (Edinb). 2007 Jun;98(6):375-84. Epub 2007 Mar 7.

32.

Microarray analysis reveals altered expression of a large number of nuclear genes in developing cytoplasmic male sterile Brassica napus flowers.

Carlsson J, Lagercrantz U, Sundström J, Teixeira R, Wellmer F, Meyerowitz EM, Glimelius K.

Plant J. 2007 Feb;49(3):452-62. Epub 2007 Jan 1.

33.

STY1 regulates auxin homeostasis and affects apical-basal patterning of the Arabidopsis gynoecium.

Sohlberg JJ, Myrenås M, Kuusk S, Lagercrantz U, Kowalczyk M, Sandberg G, Sundberg E.

Plant J. 2006 Jul;47(1):112-23. Epub 2006 Jun 1.

34.

Sequence divergence at the putative flowering time locus COL1 in Brassicaceae.

Shavorskaya O, Lagercrantz U.

Mol Phylogenet Evol. 2006 Jun;39(3):846-54. Epub 2006 Feb 17.

PMID:
16483802
35.

Mapping of quantitative trait loci (QTLs) affecting autumn freezing resistance and phenology in Salix.

Tsarouhas V, Gullberg U, Lagercrantz U.

Theor Appl Genet. 2004 May;108(7):1335-42. Epub 2004 Jan 28.

PMID:
14747916
36.

Mapping of quantitative trait loci controlling timing of bud flush in Salix.

Tsarouhas V, Gullberg U, Lagercrantz U.

Hereditas. 2003;138(3):172-8. Erratum in: Hereditas. Hereditas. 2004;140(1):79.

37.
38.

Genetic mapping of sex-linked markers in Salix viminalis L.

Semerikov V, Lagercrantz U, Tsarouhas V, Rönnberg-Wästljung A, Alström-Rapaport C, Lascoux M.

Heredity (Edinb). 2003 Sep;91(3):293-9.

39.

An AFLP and RFLP linkage map and quantitative trait locus (QTL) analysis of growth traits in Salix.

Tsarouhas V, Gullberg U, Lagercrantz U.

Theor Appl Genet. 2002 Aug;105(2-3):277-288. Epub 2002 May 23.

PMID:
12582530
40.

Sequence variation and haplotype structure at the putative flowering-time locus COL1 of Brassica nigra.

Lagercrantz U, Kruskopf Osterberg M, Lascoux M.

Mol Biol Evol. 2002 Sep;19(9):1474-82.

PMID:
12200475
41.

Naturally occurring indel variation in the Brassica nigra COL1 gene is associated with variation in flowering time.

Osterberg MK, Shavorskaya O, Lascoux M, Lagercrantz U.

Genetics. 2002 May;161(1):299-306.

42.
43.

PaHB1 is an evolutionary conserved HD-GL2 homeobox gene expressed in the protoderm during Norway spruce embryo development.

Ingouff M, Farbos I, Lagercrantz U, von Arnold S.

Genesis. 2001 Aug;30(4):220-30.

PMID:
11536428
44.

Rapid evolution of the family of CONSTANS LIKE genes in plants.

Lagercrantz U, Axelsson T.

Mol Biol Evol. 2000 Oct;17(10):1499-507.

PMID:
11018156
45.

Amphidiploid Brassica juncea contains conserved progenitor genomes.

Axelsson T, Bowman CM, Sharpe AG, Lydiate DJ, Lagercrantz U.

Genome. 2000 Aug;43(4):679-88.

PMID:
10984181
47.

Comparative genome mapping in Brassica.

Lagercrantz U, Lydiate DJ.

Genetics. 1996 Dec;144(4):1903-10.

48.
49.
50.

The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates.

Lagercrantz U, Ellegren H, Andersson L.

Nucleic Acids Res. 1993 Mar 11;21(5):1111-5.

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