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Items: 37

1.

Global Genetic Networks and the Genotype-to-Phenotype Relationship.

Costanzo M, Kuzmin E, van Leeuwen J, Mair B, Moffat J, Boone C, Andrews B.

Cell. 2019 Mar 21;177(1):85-100. doi: 10.1016/j.cell.2019.01.033. Review.

PMID:
30901552
2.

Dispersible hydrogel force sensors reveal patterns of solid mechanical stress in multicellular spheroid cultures.

Lee W, Kalashnikov N, Mok S, Halaoui R, Kuzmin E, Putnam AJ, Takayama S, Park M, McCaffrey L, Zhao R, Leask RL, Moraes C.

Nat Commun. 2019 Jan 11;10(1):144. doi: 10.1038/s41467-018-07967-4.

3.

Data on accessibility of corporate information and business transparency in Russia.

Kuzmin EA, Guseva VE, Fomina AV.

Data Brief. 2018 Sep 21;20:1890-1900. doi: 10.1016/j.dib.2018.09.048. eCollection 2018 Oct.

4.

Systematic analysis of complex genetic interactions.

Kuzmin E, VanderSluis B, Wang W, Tan G, Deshpande R, Chen Y, Usaj M, Balint A, Mattiazzi Usaj M, van Leeuwen J, Koch EN, Pons C, Dagilis AJ, Pryszlak M, Wang JZY, Hanchard J, Riggi M, Xu K, Heydari H, San Luis BJ, Shuteriqi E, Zhu H, Van Dyk N, Sharifpoor S, Costanzo M, Loewith R, Caudy A, Bolnick D, Brown GW, Andrews BJ, Boone C, Myers CL.

Science. 2018 Apr 20;360(6386). pii: eaao1729. doi: 10.1126/science.aao1729.

5.

KIBRA (WWC1) Is a Metastasis Suppressor Gene Affected by Chromosome 5q Loss in Triple-Negative Breast Cancer.

Knight JF, Sung VYC, Kuzmin E, Couzens AL, de Verteuil DA, Ratcliffe CDH, Coelho PP, Johnson RM, Samavarchi-Tehrani P, Gruosso T, Smith HW, Lee W, Saleh SM, Zuo D, Zhao H, Guiot MC, Davis RR, Gregg JP, Moraes C, Gingras AC, Park M.

Cell Rep. 2018 Mar 20;22(12):3191-3205. doi: 10.1016/j.celrep.2018.02.095.

6.

Data on empirically estimated corporate survival rate in Russia.

Kuzmin EA.

Data Brief. 2017 Dec 16;16:850-864. doi: 10.1016/j.dib.2017.12.011. eCollection 2018 Feb.

7.

Exploring genetic suppression interactions on a global scale.

van Leeuwen J, Pons C, Mellor JC, Yamaguchi TN, Friesen H, Koschwanez J, Ušaj MM, Pechlaner M, Takar M, Ušaj M, VanderSluis B, Andrusiak K, Bansal P, Baryshnikova A, Boone CE, Cao J, Cote A, Gebbia M, Horecka G, Horecka I, Kuzmin E, Legro N, Liang W, van Lieshout N, McNee M, San Luis BJ, Shaeri F, Shuteriqi E, Sun S, Yang L, Youn JY, Yuen M, Costanzo M, Gingras AC, Aloy P, Oostenbrink C, Murray A, Graham TR, Myers CL, Andrews BJ, Roth FP, Boone C.

Science. 2016 Nov 4;354(6312). pii: aag0839.

8.

A global genetic interaction network maps a wiring diagram of cellular function.

Costanzo M, VanderSluis B, Koch EN, Baryshnikova A, Pons C, Tan G, Wang W, Usaj M, Hanchard J, Lee SD, Pelechano V, Styles EB, Billmann M, van Leeuwen J, van Dyk N, Lin ZY, Kuzmin E, Nelson J, Piotrowski JS, Srikumar T, Bahr S, Chen Y, Deshpande R, Kurat CF, Li SC, Li Z, Usaj MM, Okada H, Pascoe N, San Luis BJ, Sharifpoor S, Shuteriqi E, Simpkins SW, Snider J, Suresh HG, Tan Y, Zhu H, Malod-Dognin N, Janjic V, Przulj N, Troyanskaya OG, Stagljar I, Xia T, Ohya Y, Gingras AC, Raught B, Boutros M, Steinmetz LM, Moore CL, Rosebrock AP, Caudy AA, Myers CL, Andrews B, Boone C.

Science. 2016 Sep 23;353(6306). pii: aaf1420.

9.

Synthetic Genetic Arrays: Automation of Yeast Genetics.

Kuzmin E, Costanzo M, Andrews B, Boone C.

Cold Spring Harb Protoc. 2016 Apr 1;2016(4):pdb.top086652. doi: 10.1101/pdb.top086652.

PMID:
27037078
10.

Synthetic Genetic Array Analysis.

Kuzmin E, Costanzo M, Andrews B, Boone C.

Cold Spring Harb Protoc. 2016 Apr 1;2016(4):pdb.prot088807. doi: 10.1101/pdb.prot088807.

PMID:
27037072
11.

Chemical Genomics-Based Antifungal Drug Discovery: Targeting Glycosylphosphatidylinositol (GPI) Precursor Biosynthesis.

Mann PA, McLellan CA, Koseoglu S, Si Q, Kuzmin E, Flattery A, Harris G, Sher X, Murgolo N, Wang H, Devito K, de Pedro N, Genilloud O, Kahn JN, Jiang B, Costanzo M, Boone C, Garlisi CG, Lindquist S, Roemer T.

ACS Infect Dis. 2015 Jan 9;1(1):59-72. doi: 10.1021/id5000212. Epub 2014 Dec 12.

12.

Synthetic genetic array analysis for global mapping of genetic networks in yeast.

Kuzmin E, Sharifpoor S, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C.

Methods Mol Biol. 2014;1205:143-68. doi: 10.1007/978-1-4939-1363-3_10.

PMID:
25213244
13.

Test of long-term uterine survival after allogeneic transplantation in rabbits.

Saso S, Hurst S, Chatterjee J, Kuzmin E, Thum Y, David AL, Hakim N, Corless DJ, Boyd M, Noakes DE, Lindsay I, Ghaem-Maghami S, Del Priore G, Smith JR.

J Obstet Gynaecol Res. 2014 Mar;40(3):754-62. doi: 10.1111/jog.12256. Epub 2013 Dec 10.

PMID:
24320173
14.

A comparative genomic approach for identifying synthetic lethal interactions in human cancer.

Deshpande R, Asiedu MK, Klebig M, Sutor S, Kuzmin E, Nelson J, Piotrowski J, Shin SH, Yoshida M, Costanzo M, Boone C, Wigle DA, Myers CL.

Cancer Res. 2013 Oct 15;73(20):6128-36. doi: 10.1158/0008-5472.CAN-12-3956. Epub 2013 Aug 26.

15.

SGAtools: one-stop analysis and visualization of array-based genetic interaction screens.

Wagih O, Usaj M, Baryshnikova A, VanderSluis B, Kuzmin E, Costanzo M, Myers CL, Andrews BJ, Boone CM, Parts L.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W591-6. doi: 10.1093/nar/gkt400. Epub 2013 May 15.

16.

Structure of 10He low-lying states uncovered by correlations.

Sidorchuk SI, Bezbakh AA, Chudoba V, Egorova IA, Fomichev AS, Golovkov MS, Gorshkov AV, Gorshkov VA, Grigorenko LV, Jalůvková P, Kaminski G, Krupko SA, Kuzmin EA, Nikolskii EY, Oganessian YTs, Parfenova YL, Sharov PG, Slepnev RS, Stepantsov SV, Ter-Akopian GM, Wolski R, Yukhimchuk AA, Filchagin SV, Kirdyashkin AA, Maksimkin IP, Vikhlyantsev OP.

Phys Rev Lett. 2012 May 18;108(20):202502. Epub 2012 May 15.

PMID:
23003144
17.

Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell.

Magtanong L, Ho CH, Barker SL, Jiao W, Baryshnikova A, Bahr S, Smith AM, Heisler LE, Choy JS, Kuzmin E, Andrusiak K, Kobylianski A, Li Z, Costanzo M, Basrai MA, Giaever G, Nislow C, Andrews B, Boone C.

Nat Biotechnol. 2011 May 15;29(6):505-11. doi: 10.1038/nbt.1855.

PMID:
21572441
18.

Search for a light pseudoscalar particle in the decay K_{L};{0}-->pi;{0}pi;{0}X.

Tung YC, Hsiung YB, Wu ML, Chen KF, Ahn JK, Akune Y, Baranov V, Comfort J, Doroshenko M, Fujioka Y, Inagaki T, Ishibashi S, Ishihara N, Ishii H, Iwai E, Iwata T, Kato I, Kobayashi S, Komatsubara TK, Kurilin AS, Kuzmin E, Lednev A, Lee HS, Lee SY, Lim GY, Ma J, Matsumura T, Moisseenko A, Morii H, Morimoto T, Nakano T, Nanjo H, Nix J, Nomura T, Nomachi M, Ogata R, Okuno H, Omata K, Perdue GN, Podolsky S, Sakashita K, Sasaki T, Sasao N, Sato H, Sato T, Sekimoto M, Shinkawa T, Sugaya Y, Sugiyama A, Sumida T, Suzuki S, Tajima Y, Takita S, Tsamalaidze Z, Tsukamoto T, Wah Y, Watanabe H, Yamaga M, Yamanaka T, Yoshida HY, Yoshimura Y, Zheng Y; E391a Collaboration.

Phys Rev Lett. 2009 Feb 6;102(5):051802. Epub 2009 Feb 5.

PMID:
19257503
19.

Characterization of a novel thermosensitive restorer of fertility for cytoplasmic male sterility in maize.

Gabay-Laughnan S, Kuzmin EV, Monroe J, Roark L, Newton KJ.

Genetics. 2009 May;182(1):91-103. doi: 10.1534/genetics.108.099895. Epub 2009 Mar 2.

20.

Transient limb ischaemia remotely preconditions through a humoral mechanism acting directly on the myocardium: evidence suggesting cross-species protection.

Shimizu M, Tropak M, Diaz RJ, Suto F, Surendra H, Kuzmin E, Li J, Gross G, Wilson GJ, Callahan J, Redington AN.

Clin Sci (Lond). 2009 Aug 3;117(5):191-200. doi: 10.1042/CS20080523.

PMID:
19175358
21.

Uterine allotranspiantation in the rabbit model using a macrovascular patch technique.

Sieunarine K, Doumplis D, Kuzmin E, Corless DJ, Hakim NS, Del Priore G, Smith JR.

Int Surg. 2008 Sep-Oct;93(5):288-94.

PMID:
19943432
22.

Search for the Decay K L0-->pi0nu nu[over].

Ahn JK, Akune Y, Baranov V, Chen KF, Comfort J, Doroshenko M, Fujioka Y, Hsiung YB, Inagaki T, Ishibashi S, Ishihara N, Ishii H, Iwai E, Iwata T, Kato I, Kobayashi S, Komatsubara TK, Kurilin AS, Kuzmin E, Lednev A, Lee HS, Lee SY, Lim GY, Ma J, Matsumura T, Moisseenko A, Morii H, Morimoto T, Nakano T, Nanjo H, Nix J, Nomura T, Nomachi M, Okuno H, Omata K, Perdue GN, Podolsky S, Sakashita K, Sasaki T, Sasao N, Sato H, Sato T, Sekimoto M, Shinkawa T, Sugaya Y, Sugiyama A, Sumida T, Suzuki S, Tajima Y, Takita S, Tsamalaidze Z, Tsukamoto T, Tung YC, Wah YW, Watanabe H, Wu ML, Yamaga M, Yamanaka T, Yoshida HY, Yoshimura Y; E391a Collaboration.

Phys Rev Lett. 2008 May 23;100(20):201802. Epub 2008 May 22.

PMID:
18518524
23.

GLH-1, the C. elegans P granule protein, is controlled by the JNK KGB-1 and by the COP9 subunit CSN-5.

Orsborn AM, Li W, McEwen TJ, Mizuno T, Kuzmin E, Matsumoto K, Bennett KL.

Development. 2007 Sep;134(18):3383-92. Epub 2007 Aug 15.

24.

Cross-species RNAi: selected Ascaris suum dsRNAs can sterilize Caenorhabditis elegans.

Gao G, Raikar S, Davenport B, Mutapcic L, Montgomery R, Kuzmin E, Bennett KL.

Mol Biochem Parasitol. 2006 Mar;146(1):124-8. Epub 2005 Dec 6. No abstract available.

PMID:
16388861
25.

A mitochondrial mutator system in maize.

Kuzmin EV, Duvick DN, Newton KJ.

Plant Physiol. 2005 Feb;137(2):779-89. Epub 2005 Jan 28.

26.

Mitochondrial respiratory deficiencies signal up-regulation of genes for heat shock proteins.

Kuzmin EV, Karpova OV, Elthon TE, Newton KJ.

J Biol Chem. 2004 May 14;279(20):20672-7. Epub 2004 Mar 11.

27.

Experimental evidence for the existence of 7H and for a specific structure of 8He.

Korsheninnikov AA, Nikolskii EY, Kuzmin EA, Ozawa A, Morimoto K, Tokanai F, Kanungo R, Tanihata I, Timofeyuk NK, Golovkov MS, Fomichev AS, Rodin AM, Chelnokov ML, Ter-Akopian GM, Mittig W, Roussel-Chomaz P, Savajols H, Pollacco E, Ogloblin AA, Zhukov MV.

Phys Rev Lett. 2003 Feb 28;90(8):082501. Epub 2003 Feb 27.

PMID:
12633420
28.

Differential expression of alternative oxidase genes in maize mitochondrial mutants.

Karpova OV, Kuzmin EV, Elthon TE, Newton KJ.

Plant Cell. 2002 Dec;14(12):3271-84.

29.

Superheavy hydrogen (5)H.

Korsheninnikov AA, Golovkov MS, Tanihata I, Rodin AM, Fomichev AS, Sidorchuk SI, Stepantsov SV, Chelnokov ML, Gorshkov VA, Bogdanov DD, Wolski R, Ter-Akopian GM, Oganessian YT, Mittig W, Roussel-Chomaz P, Savajols H, Kuzmin EA, Nikolskii EY, Ogloblin AA.

Phys Rev Lett. 2001 Aug 27;87(9):092501. Epub 2001 Aug 13.

PMID:
11531562
30.

Spectroscopy of the halo nucleus 11Li by an experimental study of 11Li+p collisions.

Korsheninnikov AA, Nikolskii EY, Kobayashi T, Ozawa A, Fukuda S, Kuzmin EA, Momota S, Novatskii BG, Ogloblin AA, Pribora V V, Tanihata I I, Yoshida K.

Phys Rev C Nucl Phys. 1996 Feb;53(2):R537-R540. No abstract available.

PMID:
9971034
31.

Involvement of S2 episomal sequences in the generation of NCS4 deletion mutation in maize mitochondria.

Newton KJ, Mariano JM, Gibson CM, Kuzmin E, Gabay-Laughnan S.

Dev Genet. 1996;19(3):277-86.

PMID:
8952070
32.

Multifragmentation induced by relativistic alpha projectiles.

Lips V V, Barth R, Oeschler H, Avdeyev SP, Karnaukhov VA, Kuznetsov WD, Petrov LA, Bochkarev OV, Chulkov LV, Kuzmin EA, Karcz W, Neubert W, Norbeck E.

Phys Rev Lett. 1994 Mar 14;72(11):1604-1607. No abstract available.

PMID:
10055654
33.

S2 plasmid from cms-S-maize mitochondria potentially encodes a specific RNA polymerase.

Kuzmin EV, Levchenko IV, Zaitseva GN.

Nucleic Acids Res. 1988 May 11;16(9):4177. No abstract available.

34.

S1 plasmid from cms-S-maize mitochondria encodes a viral type DNA-polymerase.

Kuzmin EV, Levchenko IV.

Nucleic Acids Res. 1987 Aug 25;15(16):6758. No abstract available.

35.

Repeated sequences with unusual properties from the divergent region of Crithidia oncopelti maxicircle kinetoplast DNA.

Tarassoff IA, Kuzmin EV, Levchenko IV, Zaitseva GN.

Mol Gen Genet. 1986 Oct;205(1):122-6.

PMID:
3025554
36.

Kinetoplast DNA segments function as promoters in Escherichia coli cells.

Kuzmin EV, Tarassoff IA, Zaitseva GN.

Mol Gen Genet. 1985;198(2):323-8.

PMID:
2984521
37.

[A SET OF CUTTERS FOR WORKING ON THE ACETABULUM].

SIVASH KM, BEZUKHOV IM, KUZMIN ES.

Med Prom SSSR. 1963 Oct;17:54-5. Russian. No abstract available.

PMID:
14129009

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