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Link between Heterotrophic Carbon Fixation and Virulence in the Porcine Lung Pathogen Actinobacillus pleuropneumoniae.

Konze SA, Abraham WR, Goethe E, Surges E, Kuypers MMM, Hoeltig D, Meens J, Vogel C, Stiesch M, Valentin-Weigand P, Gerlach GF, Buettner FFR.

Infect Immun. 2019 Aug 21;87(9). pii: e00768-18. doi: 10.1128/IAI.00768-18. Print 2019 Sep.


Phosphate availability affects fixed nitrogen transfer from diazotrophs to their epibionts.

Schoffelen NJ, Mohr W, Ferdelman TG, Duerschlag J, Littmann S, Ploug H, Kuypers MMM.

ISME J. 2019 Jun 27. doi: 10.1038/s41396-019-0453-5. [Epub ahead of print]


Direct Cell Mass Measurements Expand the Role of Small Microorganisms in Nature.

Khachikyan A, Milucka J, Littmann S, Ahmerkamp S, Meador T, Könneke M, Burg T, Kuypers MMM.

Appl Environ Microbiol. 2019 Jul 1;85(14). pii: e00493-19. doi: 10.1128/AEM.00493-19. Print 2019 Jul 15.


Untangling hidden nutrient dynamics: rapid ammonium cycling and single-cell ammonium assimilation in marine plankton communities.

Klawonn I, Bonaglia S, Whitehouse MJ, Littmann S, Tienken D, Kuypers MMM, Brüchert V, Ploug H.

ISME J. 2019 Aug;13(8):1960-1974. doi: 10.1038/s41396-019-0386-z. Epub 2019 Mar 25.


Dark aerobic sulfide oxidation by anoxygenic phototrophs in anoxic waters.

Berg JS, Pjevac P, Sommer T, Buckner CRT, Philippi M, Hach PF, Liebeke M, Holtappels M, Danza F, Tonolla M, Sengupta A, Schubert CJ, Milucka J, Kuypers MMM.

Environ Microbiol. 2019 May;21(5):1611-1626. doi: 10.1111/1462-2920.14543. Epub 2019 Mar 4.


Cyanate and urea are substrates for nitrification by Thaumarchaeota in the marine environment.

Kitzinger K, Padilla CC, Marchant HK, Hach PF, Herbold CW, Kidane AT, Könneke M, Littmann S, Mooshammer M, Niggemann J, Petrov S, Richter A, Stewart FJ, Wagner M, Kuypers MMM, Bristow LA.

Nat Microbiol. 2019 Feb;4(2):234-243. doi: 10.1038/s41564-018-0316-2. Epub 2018 Dec 10.


N2 fixation in free-floating filaments of Trichodesmium is higher than in transiently suboxic colony microenvironments.

Eichner M, Thoms S, Rost B, Mohr W, Ahmerkamp S, Ploug H, Kuypers MMM, de Beer D.

New Phytol. 2019 Apr;222(2):852-863. doi: 10.1111/nph.15621. Epub 2018 Dec 29.


Single-cell imaging of phosphorus uptake shows that key harmful algae rely on different phosphorus sources for growth.

Schoffelen NJ, Mohr W, Ferdelman TG, Littmann S, Duerschlag J, Zubkov MV, Ploug H, Kuypers MMM.

Sci Rep. 2018 Nov 21;8(1):17182. doi: 10.1038/s41598-018-35310-w.


A new mathematical model to explore microbial processes and their constraints in phytoplankton colonies and sinking marine aggregates.

Moradi N, Liu B, Iversen M, Kuypers MM, Ploug H, Khalili A.

Sci Adv. 2018 Oct 31;4(10):eaat1991. doi: 10.1126/sciadv.aat1991. eCollection 2018 Oct.


Metabolic specialization of denitrifiers in permeable sediments controls N2 O emissions.

Marchant HK, Tegetmeyer HE, Ahmerkamp S, Holtappels M, Lavik G, Graf J, Schreiber F, Mussmann M, Strous M, Kuypers MMM.

Environ Microbiol. 2018 Dec;20(12):4486-4502. doi: 10.1111/1462-2920.14385. Epub 2018 Oct 16.


Bloom of a denitrifying methanotroph, 'Candidatus Methylomirabilis limnetica', in a deep stratified lake.

Graf JS, Mayr MJ, Marchant HK, Tienken D, Hach PF, Brand A, Schubert CJ, Kuypers MMM, Milucka J.

Environ Microbiol. 2018 Jul;20(7):2598-2614. doi: 10.1111/1462-2920.14285. Epub 2018 Aug 20.


Oxygen minimum zone cryptic sulfur cycling sustained by offshore transport of key sulfur oxidizing bacteria.

Callbeck CM, Lavik G, Ferdelman TG, Fuchs B, Gruber-Vodicka HR, Hach PF, Littmann S, Schoffelen NJ, Kalvelage T, Thomsen S, Schunck H, Löscher CR, Schmitz RA, Kuypers MMM.

Nat Commun. 2018 Apr 30;9(1):1729. doi: 10.1038/s41467-018-04041-x.


Methane stimulates massive nitrogen loss from freshwater reservoirs in India.

Naqvi SWA, Lam P, Narvenkar G, Sarkar A, Naik H, Pratihary A, Shenoy DM, Gauns M, Kurian S, Damare S, Duret M, Lavik G, Kuypers MMM.

Nat Commun. 2018 Mar 28;9(1):1265. doi: 10.1038/s41467-018-03607-z.


Microbial pathways for nitrogen loss in an upland soil.

Zhu G, Wang S, Li Y, Zhuang L, Zhao S, Wang C, Kuypers MMM, Jetten MSM, Zhu Y.

Environ Microbiol. 2018 May;20(5):1723-1738. doi: 10.1111/1462-2920.14098. Epub 2018 Apr 6.


Insights into the Fundamental Physiology of the Uncultured Fe-Oxidizing Bacterium Leptothrix ochracea.

Fleming EJ, Woyke T, Donatello RA, Kuypers MMM, Sczyrba A, Littmann S, Emerson D.

Appl Environ Microbiol. 2018 Apr 16;84(9). pii: e02239-17. doi: 10.1128/AEM.02239-17. Print 2018 May 1.


The microbial nitrogen-cycling network.

Kuypers MMM, Marchant HK, Kartal B.

Nat Rev Microbiol. 2018 May;16(5):263-276. doi: 10.1038/nrmicro.2018.9. Epub 2018 Feb 5. Review.


Substrate and electron donor limitation induce phenotypic heterogeneity in different metabolic activities in a green sulphur bacterium.

Zimmermann M, Escrig S, Lavik G, Kuypers MMM, Meibom A, Ackermann M, Schreiber F.

Environ Microbiol Rep. 2018 Apr;10(2):179-183. doi: 10.1111/1758-2229.12616. Epub 2018 Feb 22.


Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations.

Nikolic N, Schreiber F, Dal Co A, Kiviet DJ, Bergmiller T, Littmann S, Kuypers MMM, Ackermann M.

PLoS Genet. 2017 Dec 18;13(12):e1007122. doi: 10.1371/journal.pgen.1007122. eCollection 2017 Dec.


Metabolic versatility of a novel N2 -fixing Alphaproteobacterium isolated from a marine oxygen minimum zone.

Martínez-Pérez C, Mohr W, Schwedt A, Dürschlag J, Callbeck CM, Schunck H, Dekaezemacker J, Buckner CRT, Lavik G, Fuchs BM, Kuypers MMM.

Environ Microbiol. 2018 Feb;20(2):755-768. doi: 10.1111/1462-2920.14008. Epub 2018 Jan 3.


Adaptability as the key to success for the ubiquitous marine nitrite oxidizer Nitrococcus.

Füssel J, Lücker S, Yilmaz P, Nowka B, van Kessel MAHJ, Bourceau P, Hach PF, Littmann S, Berg J, Spieck E, Daims H, Kuypers MMM, Lam P.

Sci Adv. 2017 Nov 1;3(11):e1700807. doi: 10.1126/sciadv.1700807. eCollection 2017 Nov.


Microbiology: A fight for scraps of ammonia.

Kuypers MMM.

Nature. 2017 Sep 13;549(7671):162-163. doi: 10.1038/549162a. No abstract available.


Biofilms on glacial surfaces: hotspots for biological activity.

Smith HJ, Schmit A, Foster R, Littman S, Kuypers MM, Foreman CM.

NPJ Biofilms Microbiomes. 2016 Jun 8;2:16008. doi: 10.1038/npjbiofilms.2016.8. eCollection 2016.


Nutrients that limit growth in the ocean.

Bristow LA, Mohr W, Ahmerkamp S, Kuypers MMM.

Curr Biol. 2017 Jun 5;27(11):R474-R478. doi: 10.1016/j.cub.2017.03.030.


Crenothrix are major methane consumers in stratified lakes.

Oswald K, Graf JS, Littmann S, Tienken D, Brand A, Wehrli B, Albertsen M, Daims H, Wagner M, Kuypers MM, Schubert CJ, Milucka J.

ISME J. 2017 Sep;11(9):2124-2140. doi: 10.1038/ismej.2017.77. Epub 2017 Jun 6.


Denitrifying community in coastal sediments performs aerobic and anaerobic respiration simultaneously.

Marchant HK, Ahmerkamp S, Lavik G, Tegetmeyer HE, Graf J, Klatt JM, Holtappels M, Walpersdorf E, Kuypers MMM.

ISME J. 2017 Aug;11(8):1799-1812. doi: 10.1038/ismej.2017.51. Epub 2017 May 2.


Chemical microenvironments and single-cell carbon and nitrogen uptake in field-collected colonies of Trichodesmium under different pCO2.

Eichner MJ, Klawonn I, Wilson ST, Littmann S, Whitehouse MJ, Church MJ, Kuypers MM, Karl DM, Ploug H.

ISME J. 2017 Jun;11(6):1305-1317. doi: 10.1038/ismej.2017.15. Epub 2017 Apr 11.


Enhanced Nitrogen Loss by Eddy-Induced Vertical Transport in the Offshore Peruvian Oxygen Minimum Zone.

Callbeck CM, Lavik G, Stramma L, Kuypers MM, Bristow LA.

PLoS One. 2017 Jan 25;12(1):e0170059. doi: 10.1371/journal.pone.0170059. eCollection 2017.


The small unicellular diazotrophic symbiont, UCYN-A, is a key player in the marine nitrogen cycle.

Martínez-Pérez C, Mohr W, Löscher CR, Dekaezemacker J, Littmann S, Yilmaz P, Lehnen N, Fuchs BM, Lavik G, Schmitz RA, LaRoche J, Kuypers MM.

Nat Microbiol. 2016 Sep 12;1(11):16163. doi: 10.1038/nmicrobiol.2016.163.


Intensive cryptic microbial iron cycling in the low iron water column of the meromictic Lake Cadagno.

Berg JS, Michellod D, Pjevac P, Martinez-Perez C, Buckner CR, Hach PF, Schubert CJ, Milucka J, Kuypers MM.

Environ Microbiol. 2016 Dec;18(12):5288-5302. doi: 10.1111/1462-2920.13587. Epub 2016 Nov 14.


Cell-specific nitrogen- and carbon-fixation of cyanobacteria in a temperate marine system (Baltic Sea).

Klawonn I, Nahar N, Walve J, Andersson B, Olofsson M, Svedén JB, Littmann S, Whitehouse MJ, Kuypers MM, Ploug H.

Environ Microbiol. 2016 Dec;18(12):4596-4609. doi: 10.1111/1462-2920.13557. Epub 2016 Nov 13.


High rates of microbial dinitrogen fixation and sulfate reduction associated with the Mediterranean seagrass Posidonia oceanica.

Lehnen N, Marchant HK, Schwedt A, Milucka J, Lott C, Weber M, Dekaezemacker J, Seah BK, Hach PF, Mohr W, Kuypers MM.

Syst Appl Microbiol. 2016 Oct;39(7):476-483. doi: 10.1016/j.syapm.2016.08.004. Epub 2016 Aug 31.


Phenotypic heterogeneity driven by nutrient limitation promotes growth in fluctuating environments.

Schreiber F, Littmann S, Lavik G, Escrig S, Meibom A, Kuypers MM, Ackermann M.

Nat Microbiol. 2016 May 9;1(6):16055. doi: 10.1038/nmicrobiol.2016.55.


Recent advances in marine N-cycle studies using 15N labeling methods.

Marchant HK, Mohr W, Kuypers MM.

Curr Opin Biotechnol. 2016 Oct;41:53-59. doi: 10.1016/j.copbio.2016.04.019. Epub 2016 May 21. Review.


Microbiology: A division of labour combined.

Kuypers MM.

Nature. 2015 Dec 24;528(7583):487-8. doi: 10.1038/528487a. No abstract available.


High cell-specific rates of nitrogen and carbon fixation by the cyanobacterium Aphanizomenon sp. at low temperatures in the Baltic Sea.

Svedén JB, Adam B, Walve J, Nahar N, Musat N, Lavik G, Whitehouse MJ, Kuypers MM, Ploug H.

FEMS Microbiol Ecol. 2015 Dec;91(12). pii: fiv131. doi: 10.1093/femsec/fiv131. Epub 2015 Oct 27.


N2-fixation, ammonium release and N-transfer to the microbial and classical food web within a plankton community.

Adam B, Klawonn I, Svedén JB, Bergkvist J, Nahar N, Walve J, Littmann S, Whitehouse MJ, Lavik G, Kuypers MM, Ploug H.

ISME J. 2016 Feb;10(2):450-9. doi: 10.1038/ismej.2015.126. Epub 2015 Aug 11.


Light-Dependent Aerobic Methane Oxidation Reduces Methane Emissions from Seasonally Stratified Lakes.

Oswald K, Milucka J, Brand A, Littmann S, Wehrli B, Kuypers MM, Schubert CJ.

PLoS One. 2015 Jul 20;10(7):e0132574. doi: 10.1371/journal.pone.0132574. eCollection 2015.


Aerobic Microbial Respiration In Oceanic Oxygen Minimum Zones.

Kalvelage T, Lavik G, Jensen MM, Revsbech NP, Löscher C, Schunck H, Desai DK, Hauss H, Kiko R, Holtappels M, LaRoche J, Schmitz RA, Graco MI, Kuypers MM.

PLoS One. 2015 Jul 20;10(7):e0133526. doi: 10.1371/journal.pone.0133526. eCollection 2015.


Use of carbon monoxide and hydrogen by a bacteria-animal symbiosis from seagrass sediments.

Kleiner M, Wentrup C, Holler T, Lavik G, Harder J, Lott C, Littmann S, Kuypers MM, Dubilier N.

Environ Microbiol. 2015 Dec;17(12):5023-35. doi: 10.1111/1462-2920.12912. Epub 2015 Jul 23.


Methane oxidation coupled to oxygenic photosynthesis in anoxic waters.

Milucka J, Kirf M, Lu L, Krupke A, Lam P, Littmann S, Kuypers MM, Schubert CJ.

ISME J. 2015 Sep;9(9):1991-2002. doi: 10.1038/ismej.2015.12. Epub 2015 Feb 13.


The effect of nutrients on carbon and nitrogen fixation by the UCYN-A-haptophyte symbiosis.

Krupke A, Mohr W, LaRoche J, Fuchs BM, Amann RI, Kuypers MM.

ISME J. 2015 Jul;9(7):1635-47. doi: 10.1038/ismej.2014.253. Epub 2014 Dec 23.


Epifluorescence, SEM, TEM and nanoSIMS image analysis of the cold phenotype of Clostridium psychrophilum at subzero temperatures.

Perfumo A, Elsaesser A, Littmann S, Foster RA, Kuypers MM, Cockell CS, Kminek G.

FEMS Microbiol Ecol. 2014 Dec;90(3):869-82. doi: 10.1111/1574-6941.12443. Epub 2014 Nov 4.


The fate of nitrate in intertidal permeable sediments.

Marchant HK, Lavik G, Holtappels M, Kuypers MM.

PLoS One. 2014 Aug 15;9(8):e104517. doi: 10.1371/journal.pone.0104517. eCollection 2014.


Temperature response of denitrification and anaerobic ammonium oxidation rates and microbial community structure in Arctic fjord sediments.

Canion A, Overholt WA, Kostka JE, Huettel M, Lavik G, Kuypers MM.

Environ Microbiol. 2014 Oct;16(10):3331-44. doi: 10.1111/1462-2920.12593. Epub 2014 Sep 22.


Are iron-phosphate minerals a sink for phosphorus in anoxic Black Sea sediments?

Dijkstra N, Kraal P, Kuypers MM, Schnetger B, Slomp CP.

PLoS One. 2014 Jul 2;9(7):e101139. doi: 10.1371/journal.pone.0101139. eCollection 2014.


Facets of diazotrophy in the oxygen minimum zone waters off Peru.

Loescher CR, Großkopf T, Desai FD, Gill D, Schunck H, Croot PL, Schlosser C, Neulinger SC, Pinnow N, Lavik G, Kuypers MM, LaRoche J, Schmitz RA.

ISME J. 2014 Nov;8(11):2180-92. doi: 10.1038/ismej.2014.71. Epub 2014 May 9.


Distribution of a consortium between unicellular algae and the N2 fixing cyanobacterium UCYN-A in the North Atlantic Ocean.

Krupke A, Lavik G, Halm H, Fuchs BM, Amann RI, Kuypers MM.

Environ Microbiol. 2014 Oct;16(10):3153-67. doi: 10.1111/1462-2920.12431. Epub 2014 Apr 17.


Aquatic respiration rate measurements at low oxygen concentrations.

Holtappels M, Tiano L, Kalvelage T, Lavik G, Revsbech NP, Kuypers MM.

PLoS One. 2014 Feb 19;9(2):e89369. doi: 10.1371/journal.pone.0089369. eCollection 2014.


Polysulfides as intermediates in the oxidation of sulfide to sulfate by Beggiatoa spp.

Berg JS, Schwedt A, Kreutzmann AC, Kuypers MM, Milucka J.

Appl Environ Microbiol. 2014 Jan;80(2):629-36. doi: 10.1128/AEM.02852-13. Epub 2013 Nov 8.


Nitrogen isotope effects induced by anammox bacteria.

Brunner B, Contreras S, Lehmann MF, Matantseva O, Rollog M, Kalvelage T, Klockgether G, Lavik G, Jetten MS, Kartal B, Kuypers MM.

Proc Natl Acad Sci U S A. 2013 Nov 19;110(47):18994-9. doi: 10.1073/pnas.1310488110. Epub 2013 Nov 4.

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