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Items: 13

1.

Epigenetic Variability Confounds Transcriptome but Not Proteome Profiling for Coexpression-based Gene Function Prediction.

Grabowski P, Kustatscher G, Rappsilber J.

Mol Cell Proteomics. 2018 Nov;17(11):2082-2090. doi: 10.1074/mcp.RA118.000935. Epub 2018 Jul 24.

2.

Pervasive coexpression of spatially proximal genes is buffered at the protein level.

Kustatscher G, Grabowski P, Rappsilber J.

Mol Syst Biol. 2017 Aug 23;13(8):937. doi: 10.15252/msb.20177548.

3.

Nano Random Forests to mine protein complexes and their relationships in quantitative proteomics data.

Montaño-Gutierrez LF, Ohta S, Kustatscher G, Earnshaw WC, Rappsilber J.

Mol Biol Cell. 2017 Mar 1;28(5):673-680. doi: 10.1091/mbc.E16-06-0370. Epub 2017 Jan 5.

4.

Compositional Dynamics: Defining the Fuzzy Cell.

Kustatscher G, Rappsilber J.

Trends Cell Biol. 2016 Nov;26(11):800-803. doi: 10.1016/j.tcb.2016.08.012. Epub 2016 Sep 17.

5.

Multiclassifier combinatorial proteomics of organelle shadows at the example of mitochondria in chromatin data.

Kustatscher G, Grabowski P, Rappsilber J.

Proteomics. 2016 Feb;16(3):393-401. doi: 10.1002/pmic.201500267. Epub 2016 Jan 25.

6.

Chromatin enrichment for proteomics.

Kustatscher G, Wills KL, Furlan C, Rappsilber J.

Nat Protoc. 2014 Sep;9(9):2090-9. doi: 10.1038/nprot.2014.142. Epub 2014 Aug 7.

7.

Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components.

Alabert C, Bukowski-Wills JC, Lee SB, Kustatscher G, Nakamura K, de Lima Alves F, Menard P, Mejlvang J, Rappsilber J, Groth A.

Nat Cell Biol. 2014 Mar;16(3):281-93. doi: 10.1038/ncb2918. Epub 2014 Feb 23.

8.

Proteomics of a fuzzy organelle: interphase chromatin.

Kustatscher G, Hégarat N, Wills KL, Furlan C, Bukowski-Wills JC, Hochegger H, Rappsilber J.

EMBO J. 2014 Mar 18;33(6):648-64. doi: 10.1002/embj.201387614. Epub 2014 Feb 16.

9.

A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation.

Timinszky G, Till S, Hassa PO, Hothorn M, Kustatscher G, Nijmeijer B, Colombelli J, Altmeyer M, Stelzer EH, Scheffzek K, Hottiger MO, Ladurner AG.

Nat Struct Mol Biol. 2009 Sep;16(9):923-9. doi: 10.1038/nsmb.1664. Epub 2009 Aug 13.

PMID:
19680243
10.

Histone macroH2A isoforms predict the risk of lung cancer recurrence.

Sporn JC, Kustatscher G, Hothorn T, Collado M, Serrano M, Muley T, Schnabel P, Ladurner AG.

Oncogene. 2009 Sep 24;28(38):3423-8. doi: 10.1038/onc.2009.26. Epub 2009 Aug 3.

PMID:
19648962
11.

Modular paths to 'decoding' and 'wiping' histone lysine methylation.

Kustatscher G, Ladurner AG.

Curr Opin Chem Biol. 2007 Dec;11(6):628-35. Epub 2007 Nov 7. Review.

PMID:
17988933
12.

Splicing regulates NAD metabolite binding to histone macroH2A.

Kustatscher G, Hothorn M, Pugieux C, Scheffzek K, Ladurner AG.

Nat Struct Mol Biol. 2005 Jul;12(7):624-5. Epub 2005 Jun 19.

PMID:
15965484
13.

The macro domain is an ADP-ribose binding module.

Karras GI, Kustatscher G, Buhecha HR, Allen MD, Pugieux C, Sait F, Bycroft M, Ladurner AG.

EMBO J. 2005 Jun 1;24(11):1911-20. Epub 2005 May 19.

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