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Items: 1 to 50 of 51

1.

Evidence for potassium transport activity of Arabidopsis KEA1-KEA6.

Tsujii M, Kera K, Hamamoto S, Kuromori T, Shikanai T, Uozumi N.

Sci Rep. 2019 Jul 11;9(1):10040. doi: 10.1038/s41598-019-46463-7.

2.

SnRK1 Kinase and the NAC Transcription Factor SOG1 Are Components of a Novel Signaling Pathway Mediating the Low Energy Response Triggered by ATP Depletion.

Hamasaki H, Kurihara Y, Kuromori T, Kusano H, Nagata N, Yamamoto YY, Shimada H, Matsui M.

Front Plant Sci. 2019 May 10;10:503. doi: 10.3389/fpls.2019.00503. eCollection 2019.

3.

Regulatory Gene Networks in Drought Stress Responses and Resistance in Plants.

Takahashi F, Kuromori T, Sato H, Shinozaki K.

Adv Exp Med Biol. 2018;1081:189-214. doi: 10.1007/978-981-13-1244-1_11. Review.

PMID:
30288711
4.

ABA Transport and Plant Water Stress Responses.

Kuromori T, Seo M, Shinozaki K.

Trends Plant Sci. 2018 Jun;23(6):513-522. doi: 10.1016/j.tplants.2018.04.001. Epub 2018 May 3. Review.

PMID:
29731225
5.

Functional relationship of AtABCG21 and AtABCG22 in stomatal regulation.

Kuromori T, Sugimoto E, Ohiraki H, Yamaguchi-Shinozaki K, Shinozaki K.

Sci Rep. 2017 Oct 2;7(1):12501. doi: 10.1038/s41598-017-12643-6.

6.

Erratum: Acetate-mediated novel survival strategy against drought in plants.

Kim JM, To TK, Matsui A, Tanoi K, Kobayashi NI, Matsuda F, Habu Y, Ogawa D, Sakamoto T, Matsunaga S, Bashir K, Rasheed S, Ando M, Takeda H, Kawaura K, Kusano M, Fukushima A, Takaho A E, Kuromori T, Ishida J, Morosawa T, Tanaka M, Torii C, Takebayashi Y, Sakakibara H, Ogihara Y, Saito K, Shinozaki K, Devoto A, Seki M.

Nat Plants. 2017 Jul 17;3:17119. doi: 10.1038/nplants.2017.119.

PMID:
28714955
7.

Acetate-mediated novel survival strategy against drought in plants.

Kim JM, To TK, Matsui A, Tanoi K, Kobayashi NI, Matsuda F, Habu Y, Ogawa D, Sakamoto T, Matsunaga S, Bashir K, Rasheed S, Ando M, Takeda H, Kawaura K, Kusano M, Fukushima A, Endo TA, Kuromori T, Ishida J, Morosawa T, Tanaka M, Torii C, Takebayashi Y, Sakakibara H, Ogihara Y, Saito K, Shinozaki K, Devoto A, Seki M.

Nat Plants. 2017 Jun 26;3:17097. doi: 10.1038/nplants.2017.97. Erratum in: Nat Plants. 2017 Jul 17;3:17119.

PMID:
28650429
8.

Overexpression of AtABCG25 enhances the abscisic acid signal in guard cells and improves plant water use efficiency.

Kuromori T, Fujita M, Urano K, Tanabata T, Sugimoto E, Shinozaki K.

Plant Sci. 2016 Oct;251:75-81. doi: 10.1016/j.plantsci.2016.02.019. Epub 2016 Mar 3.

PMID:
27593465
9.

AtPHT4;4 is a chloroplast-localized ascorbate transporter in Arabidopsis.

Miyaji T, Kuromori T, Takeuchi Y, Yamaji N, Yokosho K, Shimazawa A, Sugimoto E, Omote H, Ma JF, Shinozaki K, Moriyama Y.

Nat Commun. 2015 Jan 5;6:5928. doi: 10.1038/ncomms6928.

10.

Intertissue signal transfer of abscisic acid from vascular cells to guard cells.

Kuromori T, Sugimoto E, Shinozaki K.

Plant Physiol. 2014 Apr;164(4):1587-92. doi: 10.1104/pp.114.235556. Epub 2014 Feb 12.

11.

RARGE II: an integrated phenotype database of Arabidopsis mutant traits using a controlled vocabulary.

Akiyama K, Kurotani A, Iida K, Kuromori T, Shinozaki K, Sakurai T.

Plant Cell Physiol. 2014 Jan;55(1):e4. doi: 10.1093/pcp/pct165. Epub 2013 Nov 21.

12.

SD3, an Arabidopsis thaliana homolog of TIM21, affects intracellular ATP levels and seedling development.

Hamasaki H, Yoshizumi T, Takahashi N, Higuchi M, Kuromori T, Imura Y, Shimada H, Matsui M.

Mol Plant. 2012 Mar;5(2):461-71. doi: 10.1093/mp/ssr088. Epub 2011 Nov 29.

13.

Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana.

Yonekura-Sakakibara K, Fukushima A, Nakabayashi R, Hanada K, Matsuda F, Sugawara S, Inoue E, Kuromori T, Ito T, Shinozaki K, Wangwattana B, Yamazaki M, Saito K.

Plant J. 2012 Jan;69(1):154-67. doi: 10.1111/j.1365-313X.2011.04779.x. Epub 2011 Oct 14.

14.

Arabidopsis mutant of AtABCG26, an ABC transporter gene, is defective in pollen maturation.

Kuromori T, Ito T, Sugimoto E, Shinozaki K.

J Plant Physiol. 2011 Nov 1;168(16):2001-5. doi: 10.1016/j.jplph.2011.05.014. Epub 2011 Jun 21.

PMID:
21696844
15.

Arabidopsis mutants of AtABCG22, an ABC transporter gene, increase water transpiration and drought susceptibility.

Kuromori T, Sugimoto E, Shinozaki K.

Plant J. 2011 Sep;67(5):885-94. doi: 10.1111/j.1365-313X.2011.04641.x. Epub 2011 Jun 29.

16.

Molecular basis of the core regulatory network in ABA responses: sensing, signaling and transport.

Umezawa T, Nakashima K, Miyakawa T, Kuromori T, Tanokura M, Shinozaki K, Yamaguchi-Shinozaki K.

Plant Cell Physiol. 2010 Nov;51(11):1821-39. doi: 10.1093/pcp/pcq156. Epub 2010 Oct 26. Review.

17.

ABA transport factors found in Arabidopsis ABC transporters.

Kuromori T, Shinozaki K.

Plant Signal Behav. 2010 Sep;5(9):1124-6. Epub 2010 Sep 1.

18.

Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.

Hanada K, Sawada Y, Kuromori T, Klausnitzer R, Saito K, Toyoda T, Shinozaki K, Li WH, Hirai MY.

Mol Biol Evol. 2011 Jan;28(1):377-82. doi: 10.1093/molbev/msq204. Epub 2010 Aug 24.

19.

Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources.

Hirai MY, Sawada Y, Kanaya S, Kuromori T, Kobayashi M, Klausnitzer R, Hanada K, Akiyama K, Sakurai T, Saito K, Shinozaki K.

J Plant Res. 2010 May;123(3):291-8. doi: 10.1007/s10265-010-0337-2. Epub 2010 Apr 6.

PMID:
20369372
20.

ABC transporter AtABCG25 is involved in abscisic acid transport and responses.

Kuromori T, Miyaji T, Yabuuchi H, Shimizu H, Sugimoto E, Kamiya A, Moriyama Y, Shinozaki K.

Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2361-6. doi: 10.1073/pnas.0912516107. Epub 2010 Jan 19.

21.

Increased expression and protein divergence in duplicate genes is associated with morphological diversification.

Hanada K, Kuromori T, Myouga F, Toyoda T, Shinozaki K.

PLoS Genet. 2009 Dec;5(12):e1000781. doi: 10.1371/journal.pgen.1000781. Epub 2009 Dec 24.

22.

The Chloroplast Function Database: a large-scale collection of Arabidopsis Ds/Spm- or T-DNA-tagged homozygous lines for nuclear-encoded chloroplast proteins, and their systematic phenotype analysis.

Myouga F, Akiyama K, Motohashi R, Kuromori T, Ito T, Iizumi H, Ryusui R, Sakurai T, Shinozaki K.

Plant J. 2010 Feb 1;61(3):529-42. doi: 10.1111/j.1365-313X.2009.04074.x. Epub 2009 Nov 14.

23.

PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants.

Makita Y, Kobayashi N, Mochizuki Y, Yoshida Y, Asano S, Heida N, Deshpande M, Bhatia R, Matsushima A, Ishii M, Kawaguchi S, Iida K, Hanada K, Kuromori T, Seki M, Shinozaki K, Toyoda T.

Plant Cell Physiol. 2009 Jul;50(7):1249-59. doi: 10.1093/pcp/pcp086. Epub 2009 Jun 15.

24.

Phenome analysis in plant species using loss-of-function and gain-of-function mutants.

Kuromori T, Takahashi S, Kondou Y, Shinozaki K, Matsui M.

Plant Cell Physiol. 2009 Jul;50(7):1215-31. doi: 10.1093/pcp/pcp078. Epub 2009 Jun 5. Review.

25.

Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis.

Hanada K, Kuromori T, Myouga F, Toyoda T, Li WH, Shinozaki K.

Genome Biol Evol. 2009 Oct 29;1:409-14. doi: 10.1093/gbe/evp043.

26.

A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.

Myouga F, Hosoda C, Umezawa T, Iizumi H, Kuromori T, Motohashi R, Shono Y, Nagata N, Ikeuchi M, Shinozaki K.

Plant Cell. 2008 Nov;20(11):3148-62. doi: 10.1105/tpc.108.061341. Epub 2008 Nov 7.

27.

MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites.

Matsuda F, Yonekura-Sakakibara K, Niida R, Kuromori T, Shinozaki K, Saito K.

Plant J. 2009 Feb;57(3):555-77. doi: 10.1111/j.1365-313X.2008.03705.x.

28.

The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.

Hayashi S, Ishii T, Matsunaga T, Tominaga R, Kuromori T, Wada T, Shinozaki K, Hirayama T.

Plant Cell Physiol. 2008 Oct;49(10):1522-35. doi: 10.1093/pcp/pcn120. Epub 2008 Aug 20.

PMID:
18718934
29.

Homologous chromosome pairing is completed in crossover defective atzip4 mutant.

Kuromori T, Azumi Y, Hayakawa S, Kamiya A, Imura Y, Wada T, Shinozaki K.

Biochem Biophys Res Commun. 2008 May 23;370(1):98-103. doi: 10.1016/j.bbrc.2008.03.036. Epub 2008 Mar 17.

PMID:
18348867
30.

Cytological and biochemical analysis of COF1, an Arabidopsis mutant of an ABC transporter gene.

Ukitsu H, Kuromori T, Toyooka K, Goto Y, Matsuoka K, Sakuradani E, Shimizu S, Kamiya A, Imura Y, Yuguchi M, Wada T, Hirayama T, Shinozaki K.

Plant Cell Physiol. 2007 Nov;48(11):1524-33. Epub 2007 Oct 30.

PMID:
17971336
31.

Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal.

Iuchi S, Suzuki H, Kim YC, Iuchi A, Kuromori T, Ueguchi-Tanaka M, Asami T, Yamaguchi I, Matsuoka M, Kobayashi M, Nakajima M.

Plant J. 2007 Jun;50(6):958-66. Epub 2007 May 23.

32.

Top-down phenomics of Arabidopsis thaliana: metabolic profiling by one- and two-dimensional nuclear magnetic resonance spectroscopy and transcriptome analysis of albino mutants.

Tian C, Chikayama E, Tsuboi Y, Kuromori T, Shinozaki K, Kikuchi J, Hirayama T.

J Biol Chem. 2007 Jun 22;282(25):18532-41. Epub 2007 Apr 27.

33.

Arabidopsis SPO11-2 functions with SPO11-1 in meiotic recombination.

Stacey NJ, Kuromori T, Azumi Y, Roberts G, Breuer C, Wada T, Maxwell A, Roberts K, Sugimoto-Shirasu K.

Plant J. 2006 Oct;48(2):206-16.

34.

An Arabidopsis chloroplast-targeted Hsp101 homologue, APG6, has an essential role in chloroplast development as well as heat-stress response.

Myouga F, Motohashi R, Kuromori T, Nagata N, Shinozaki K.

Plant J. 2006 Oct;48(2):249-60. Epub 2006 Sep 22.

35.

Loss of Necrotic Spotted Lesions 1 associates with cell death and defense responses in Arabidopsis thaliana.

Noutoshi Y, Kuromori T, Wada T, Hirayama T, Kamiya A, Imura Y, Yasuda M, Nakashita H, Shirasu K, Shinozaki K.

Plant Mol Biol. 2006 Sep;62(1-2):29-42. Epub 2006 Aug 10.

PMID:
16900325
36.

A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis.

Kuromori T, Wada T, Kamiya A, Yuguchi M, Yokouchi T, Imura Y, Takabe H, Sakurai T, Akiyama K, Hirayama T, Okada K, Shinozaki K.

Plant J. 2006 Aug;47(4):640-51. Epub 2006 Jun 30.

37.

Analysis of ABA hypersensitive germination2 revealed the pivotal functions of PARN in stress response in Arabidopsis.

Nishimura N, Kitahata N, Seki M, Narusaka Y, Narusaka M, Kuromori T, Asami T, Shinozaki K, Hirayama T.

Plant J. 2005 Dec;44(6):972-84.

38.

ABA-hypersensitive germination3 encodes a protein phosphatase 2C (AtPP2CA) that strongly regulates abscisic acid signaling during germination among Arabidopsis protein phosphatase 2Cs.

Yoshida T, Nishimura N, Kitahata N, Kuromori T, Ito T, Asami T, Shinozaki K, Hirayama T.

Plant Physiol. 2006 Jan;140(1):115-26. Epub 2005 Dec 9.

39.

A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.

Ito T, Motohashi R, Kuromori T, Noutoshi Y, Seki M, Kamiya A, Mizukado S, Sakurai T, Shinozaki K.

Plant Cell Physiol. 2005 Jul;46(7):1149-53. Epub 2005 Apr 19.

PMID:
15840642
40.

RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome.

Sakurai T, Satou M, Akiyama K, Iida K, Seki M, Kuromori T, Ito T, Konagaya A, Toyoda T, Shinozaki K.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D647-50.

41.

AtIPT3 is a key determinant of nitrate-dependent cytokinin biosynthesis in Arabidopsis.

Takei K, Ueda N, Aoki K, Kuromori T, Hirayama T, Shinozaki K, Yamaya T, Sakakibara H.

Plant Cell Physiol. 2004 Aug;45(8):1053-62.

PMID:
15356331
42.
43.

A collection of 11 800 single-copy Ds transposon insertion lines in Arabidopsis.

Kuromori T, Hirayama T, Kiyosue Y, Takabe H, Mizukado S, Sakurai T, Akiyama K, Kamiya A, Ito T, Shinozaki K.

Plant J. 2004 Mar;37(6):897-905.

44.

Expression and interaction analysis of Arabidopsis Skp1-related genes.

Takahashi N, Kuroda H, Kuromori T, Hirayama T, Seki M, Shinozaki K, Shimada H, Matsui M.

Plant Cell Physiol. 2004 Jan;45(1):83-91.

PMID:
14749489
45.

A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome.

Ito T, Motohashi R, Kuromori T, Mizukado S, Sakurai T, Kanahara H, Seki M, Shinozaki K.

Plant Physiol. 2002 Aug;129(4):1695-9.

46.

Arabidopsis cDNA clones isolated by transcomplementation of the fission yeast cAMP phosphodiesterase mutant.

Oshitani-Okamoto S, Kuromori T, Goto M, Yamamoto M.

DNA Res. 2001 Aug 31;8(4):189-92. No abstract available.

PMID:
11572485
47.

Global patterns of human DNA sequence variation in a 10-kb region on chromosome 1.

Yu N, Zhao Z, Fu YX, Sambuughin N, Ramsay M, Jenkins T, Leskinen E, Patthy L, Jorde LB, Kuromori T, Li WH.

Mol Biol Evol. 2001 Feb;18(2):214-22.

PMID:
11158380
48.

Members of the Arabidopsis 14-3-3 gene family trans-complement two types of defects in fission yeast.

Kuromori T, Yamamoto M.

Plant Sci. 2000 Sep 8;158(1-2):155-161.

PMID:
10996255
49.

Genetic definition and sequence analysis of Arabidopsis centromeres.

Copenhaver GP, Nickel K, Kuromori T, Benito MI, Kaul S, Lin X, Bevan M, Murphy G, Harris B, Parnell LD, McCombie WR, Martienssen RA, Marra M, Preuss D.

Science. 1999 Dec 24;286(5449):2468-74.

50.

Functional cloning of a cDNA encoding Mei2-like protein from Arabidopsis thaliana using a fission yeast pheromone receptor deficient mutant.

Hirayama T, Ishida C, Kuromori T, Obata S, Shimoda C, Yamamoto M, Shinozaki K, Ohto C.

FEBS Lett. 1997 Aug 11;413(1):16-20.

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