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In vivo measurement of organelle motility in human retinal pigment epithelial cells.

Liu Z, Kurokawa K, Hammer DX, Miller DT.

Biomed Opt Express. 2019 Jul 19;10(8):4142-4158. doi: 10.1364/BOE.10.004142. eCollection 2019 Aug 1.


Gastrointestinal adverse effects of nintedanib and the associated risk factors in patients with idiopathic pulmonary fibrosis.

Kato M, Sasaki S, Nakamura T, Kurokawa K, Yamada T, Ochi Y, Ihara H, Takahashi F, Takahashi K.

Sci Rep. 2019 Aug 19;9(1):12062. doi: 10.1038/s41598-019-48593-4.


Blastochloris tepida, sp. nov., a thermophilic species of the bacteriochlorophyll b-containing genus Blastochloris.

Madigan MT, Resnick SM, Kempher ML, Dohnalkova AC, Takaichi S, Wang-Otomo ZY, Toyoda A, Kurokawa K, Mori H, Tsukatani Y.

Arch Microbiol. 2019 Jul 17. doi: 10.1007/s00203-019-01701-4. [Epub ahead of print]


Spatiotemporal dissection of the trans-Golgi network in budding yeast.

Tojima T, Suda Y, Ishii M, Kurokawa K, Nakano A.

J Cell Sci. 2019 Aug 2;132(15). pii: jcs231159. doi: 10.1242/jcs.231159.


Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer.

Yachida S, Mizutani S, Shiroma H, Shiba S, Nakajima T, Sakamoto T, Watanabe H, Masuda K, Nishimoto Y, Kubo M, Hosoda F, Rokutan H, Matsumoto M, Takamaru H, Yamada M, Matsuda T, Iwasaki M, Yamaji T, Yachida T, Soga T, Kurokawa K, Toyoda A, Ogura Y, Hayashi T, Hatakeyama M, Nakagama H, Saito Y, Fukuda S, Shibata T, Yamada T.

Nat Med. 2019 Jun;25(6):968-976. doi: 10.1038/s41591-019-0458-7. Epub 2019 Jun 6.


Paraneoplastic dermatomyositis appearing after nivolumab therapy for gastric cancer: a case report.

Shibata C, Kato J, Toda N, Imai M, Fukumura Y, Arai J, Kurokawa K, Kondo M, Takagi K, Kojima K, Ohki T, Seki M, Yoshida M, Suzuki A, Tagawa K.

J Med Case Rep. 2019 Jun 2;13(1):168. doi: 10.1186/s13256-019-2105-9.


COPII proteins exhibit distinct subdomains within each ER exit site for executing their functions.

Maeda M, Kurokawa K, Katada T, Nakano A, Saito K.

Sci Rep. 2019 May 14;9(1):7346. doi: 10.1038/s41598-019-43813-3.


Real-World Evidence of Safety and Efficacy of Carboplatin plus Nanoparticle Albumin-Bound Paclitaxel in Patients with Advanced Non-Small-Cell Lung Cancer and Preexisting Interstitial Lung Disease: A Retrospective Study.

Araya T, Kita T, Ueda T, Terada N, Sakai T, Yamamura K, Kurokawa K, Uchida Y, Sone T, Kimura H, Kasahara K.

Can Respir J. 2019 Mar 20;2019:5315903. doi: 10.1155/2019/5315903. eCollection 2019.


Severe mediastinitis over a month after endobronchial ultrasound-guided transbronchial needle aspiration.

Kurokawa K, Asao T, Ko R, Nagaoka T, Suzuki K, Takahashi K.

Respirol Case Rep. 2019 Apr 9;7(5):e00426. doi: 10.1002/rcr2.426. eCollection 2019 Jul.


Cone photoreceptor classification in the living human eye from photostimulation-induced phase dynamics.

Zhang F, Kurokawa K, Lassoued A, Crowell JA, Miller DT.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7951-7956. doi: 10.1073/pnas.1816360116. Epub 2019 Apr 3.


Involvement of PLAGL1/ZAC1 in hypocretin/orexin transcription.

Tanaka S, Honda Y, Takaku S, Koike T, Oe S, Hirahara Y, Yoshida T, Takizawa N, Takamori Y, Kurokawa K, Kodama T, Yamada H.

Int J Mol Med. 2019 May;43(5):2164-2176. doi: 10.3892/ijmm.2019.4143. Epub 2019 Mar 20.


Effect of Solution pH on Distribution of Ophthalmically Administered Brimonidine in Posterior Ocular Tissues in Pigmented Rabbits.

Shinno K, Kurokawa K, Kozai S, Kawamura A, Inada K, Tokushige H.

Ophthalmol Ther. 2019 Jun;8(2):271-277. doi: 10.1007/s40123-019-0180-z. Epub 2019 Mar 20.


Local structural changes of the influenza A virus ribonucleoprotein complex by single mutations in the specific residues involved in efficient genome packaging.

Takizawa N, Ogura Y, Fujita Y, Noda T, Shigematsu H, Hayashi T, Kurokawa K.

Virology. 2019 May;531:126-140. doi: 10.1016/j.virol.2019.03.004. Epub 2019 Mar 7.


Visualization of secretory cargo transport within the Golgi apparatus.

Kurokawa K, Osakada H, Kojidani T, Waga M, Suda Y, Asakawa H, Haraguchi T, Nakano A.

J Cell Biol. 2019 May 6;218(5):1602-1618. doi: 10.1083/jcb.201807194. Epub 2019 Mar 11.


Morphological characteristics of p75 neurotrophin receptor-positive cells define a new type of glial cell in the rat dorsal root ganglia.

Koike T, Tanaka S, Hirahara Y, Oe S, Kurokawa K, Maeda M, Suga M, Kataoka Y, Yamada H.

J Comp Neurol. 2019 Aug 15;527(12):2047-2060. doi: 10.1002/cne.24667. Epub 2019 Mar 6.


The Relationship Between Microbial Community Structures and Environmental Parameters Revealed by Metagenomic Analysis of Hot Spring Water in the Kirishima Area, Japan.

Nishiyama E, Higashi K, Mori H, Suda K, Nakamura H, Omori S, Maruyama S, Hongoh Y, Kurokawa K.

Front Bioeng Biotechnol. 2018 Dec 20;6:202. doi: 10.3389/fbioe.2018.00202. eCollection 2018.


Quantification of hydrogen production by intestinal bacteria that are specifically dysregulated in Parkinson's disease.

Suzuki A, Ito M, Hamaguchi T, Mori H, Takeda Y, Baba R, Watanabe T, Kurokawa K, Asakawa S, Hirayama M, Ohno K.

PLoS One. 2018 Dec 26;13(12):e0208313. doi: 10.1371/journal.pone.0208313. eCollection 2018.


Usual Interstitial Pneumonia Pattern in the Lower Lung Lobes as a Prognostic Factor in Idiopathic Pleuroparenchymal Fibroelastosis.

Kato M, Sasaki S, Kurokawa K, Nakamura T, Yamada T, Sasano H, Arano N, Komura M, Ihara H, Nagashima O, Shiota S, Takahashi F, Takahashi K.

Respiration. 2019;97(4):319-328. doi: 10.1159/000494061. Epub 2018 Dec 6.


Differential expression of nuclear lamin subtypes in the neural cells of the adult rat cerebral cortex.

Takamori Y, Hirahara Y, Wakabayashi T, Mori T, Koike T, Kataoka Y, Tamura Y, Kurebayashi S, Kurokawa K, Yamada H.

IBRO Rep. 2018 Nov 5;5:99-109. doi: 10.1016/j.ibror.2018.11.001. eCollection 2018 Dec.


The ER exit sites are specialized ER zones for the transport of cargo proteins from the ER to the Golgi apparatus.

Kurokawa K, Nakano A.

J Biochem. 2019 Feb 1;165(2):109-114. doi: 10.1093/jb/mvy080. Review.


Combined hardware and computational optical wavefront correction.

South FA, Kurokawa K, Liu Z, Liu YZ, Miller DT, Boppart SA.

Biomed Opt Express. 2018 May 8;9(6):2562-2574. doi: 10.1364/BOE.9.002562. eCollection 2018 Jun 1.


Influence of placement sites of the active recording electrode on CMAP configuration in the trapezius muscle.

Hemmi S, Kurokawa K, Nagai T, Asano A, Okamoto T, Murakami T, Mihara M, Sunada Y.

Clin Neurophysiol Pract. 2018 Feb 23;3:54-58. doi: 10.1016/j.cnp.2018.02.003. eCollection 2018.


Usefulness of Cardiac Magnetic Resonance in the Diagnosis of Löffler Endocarditis Secondary to Eosinophilic Granulomatosis with Polyangiitis.

Kurokawa K, Sai E, Hayashi E, Minowa K, Sugano K, Yoshihara T, Miyazaki T, Hiki M, Yokoyama T, Suzuki M, Miyauchi K.

Intern Med. 2019 Jan 15;58(2):239-242. doi: 10.2169/internalmedicine.1303-18. Epub 2018 Aug 24.


A case of anti-MOG antibody-positive unilaterally dominant meningoencephalitis followed by longitudinally extensive transverse myelitis.

Sugimoto T, Ishibashi H, Hayashi M, Tachiyama K, Fujii H, Kaneko K, Takahashi T, Kurokawa K, Yamawaki T.

Mult Scler Relat Disord. 2018 Oct;25:128-130. doi: 10.1016/j.msard.2018.07.028. Epub 2018 Jul 26.


Minor taxa in human skin microbiome contribute to the personal identification.

Watanabe H, Nakamura I, Mizutani S, Kurokawa Y, Mori H, Kurokawa K, Yamada T.

PLoS One. 2018 Jul 25;13(7):e0199947. doi: 10.1371/journal.pone.0199947. eCollection 2018.


The Gilliatt-Sumner hand: a diagnostic clue of neurogenic thoracic outlet syndrome.

Matsubara T, Kurokawa K, Sakurai K, Yasutomi H, Yamawaki T.

QJM. 2018 Nov 1;111(11):831-832. doi: 10.1093/qjmed/hcy122. No abstract available.


Latent environment allocation of microbial community data.

Higashi K, Suzuki S, Kurosawa S, Mori H, Kurokawa K.

PLoS Comput Biol. 2018 Jun 6;14(6):e1006143. doi: 10.1371/journal.pcbi.1006143. eCollection 2018 Jun.


VITCOMIC2: visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing.

Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.

BMC Syst Biol. 2018 Mar 19;12(Suppl 2):30. doi: 10.1186/s12918-018-0545-2.


Rhodium(I)-Catalyzed Ring-Closing Reaction of Allene-Alkene-Alkynes: One-Step Construction of Tricyclo[,6 ] and Bicyclo[6.3.0] Skeletons from Linear Carbon Chains.

Kawaguchi Y, Nagata A, Kurokawa K, Yokosawa H, Mukai C.

Chemistry. 2018 May 2;24(25):6538-6542. doi: 10.1002/chem.201801239. Epub 2018 Apr 16.


Regulation of ER-Golgi Transport Dynamics by GTPases in Budding Yeast.

Suda Y, Kurokawa K, Nakano A.

Front Cell Dev Biol. 2018 Jan 24;5:122. doi: 10.3389/fcell.2017.00122. eCollection 2017. Review.


Complete Genome Sequence of the Nonheterocystous Cyanobacterium Pseudanabaena sp. ABRG5-3.

Tajima N, Kanesaki Y, Sato S, Yoshikawa H, Maruyama F, Kurokawa K, Ohta H, Nishizawa T, Asayama M, Sato N.

Genome Announc. 2018 Feb 8;6(6). pii: e01608-17. doi: 10.1128/genomeA.01608-17.


Possible involvement of monoamine neurons in the emotional abnormality in Kir6.2-deficient mice.

Saito A, Miyagawa K, Miyagishi H, Kurokawa K, Umeda A, Okada Y, Tsuji M, Takeda H.

Physiol Behav. 2018 May 1;188:251-261. doi: 10.1016/j.physbeh.2018.02.014. Epub 2018 Feb 10.


Yokukansan, a traditional Japanese herbal medicine, enhances the anxiolytic effect of fluvoxamine and reduces cortical 5-HT2A receptor expression in mice.

Ohno R, Miyagishi H, Tsuji M, Saito A, Miyagawa K, Kurokawa K, Takeda H.

J Ethnopharmacol. 2018 Apr 24;216:89-96. doi: 10.1016/j.jep.2018.01.032. Epub 2018 Jan 31.


Activation of Rab GTPase Sec4 by its GEF Sec2 is required for prospore membrane formation during sporulation in yeast Saccharomyces cerevisiae.

Suda Y, Tachikawa H, Inoue I, Kurita T, Saito C, Kurokawa K, Nakano A, Irie K.

FEMS Yeast Res. 2018 Feb 1;18(1). doi: 10.1093/femsyr/fox095.


Imaging and quantifying ganglion cells and other transparent neurons in the living human retina.

Liu Z, Kurokawa K, Zhang F, Lee JJ, Miller DT.

Proc Natl Acad Sci U S A. 2017 Nov 28;114(48):12803-12808. doi: 10.1073/pnas.1711734114. Epub 2017 Nov 14.


R-Spondin1 expands Paneth cells and prevents dysbiosis induced by graft-versus-host disease.

Hayase E, Hashimoto D, Nakamura K, Noizat C, Ogasawara R, Takahashi S, Ohigashi H, Yokoi Y, Sugimoto R, Matsuoka S, Ara T, Yokoyama E, Yamakawa T, Ebata K, Kondo T, Hiramine R, Aizawa T, Ogura Y, Hayashi T, Mori H, Kurokawa K, Tomizuka K, Ayabe T, Teshima T.

J Exp Med. 2017 Dec 4;214(12):3507-3518. doi: 10.1084/jem.20170418. Epub 2017 Oct 24.


Clinical characteristics of 17 adult patients with epidemic myalgia associated with human parechovirus type 3 infection.

Yamakawa T, Mizuta K, Kurokawa K, Nagasawa H, Yamada T, Suzuki E, Wada M.

Rinsho Shinkeigaku. 2017 Sep 30;57(9):485-491. doi: 10.5692/ Epub 2017 Aug 31. Japanese.


MiR-199a Inhibits Secondary Envelopment of Herpes Simplex Virus-1 Through the Downregulation of Cdc42-specific GTPase Activating Protein Localized in Golgi Apparatus.

Kobayashi K, Suemasa F, Sagara H, Nakamura S, Ino Y, Kobayashi K, Hiramatsu H, Haraguchi T, Kurokawa K, Todo T, Nakano A, Iba H.

Sci Rep. 2017 Jul 27;7(1):6650. doi: 10.1038/s41598-017-06754-3.


Adsorption of Staphylococcus viruses S13' and S24-1 on Staphylococcus aureus strains with different glycosidic linkage patterns of wall teichoic acids.

Uchiyama J, Taniguchi M, Kurokawa K, Takemura-Uchiyama I, Ujihara T, Shimakura H, Sakaguchi Y, Murakami H, Sakaguchi M, Matsuzaki S.

J Gen Virol. 2017 Aug;98(8):2171-2180. doi: 10.1099/jgv.0.000865. Epub 2017 Jul 21.


Adaptive optics optical coherence tomography angiography for morphometric analysis of choriocapillaris [Invited].

Kurokawa K, Liu Z, Miller DT.

Biomed Opt Express. 2017 Feb 24;8(3):1803-1822. doi: 10.1364/BOE.8.001803. eCollection 2017 Mar 1.


A new technique for dorsal sural nerve conduction study with surface strip electrodes.

Hemmi S, Kurokawa K, Nagai T, Kushida R, Okamoto T, Murakami T, Sunada Y.

Clin Neurophysiol. 2017 Jul;128(7):1214-1219. doi: 10.1016/j.clinph.2017.04.004. Epub 2017 Apr 19.


Intestinal IgA as a modulator of the gut microbiota.

Okai S, Usui F, Ohta M, Mori H, Kurokawa K, Matsumoto S, Kato T, Miyauchi E, Ohno H, Shinkura R.

Gut Microbes. 2017 Sep 3;8(5):486-492. doi: 10.1080/19490976.2017.1310357. Epub 2017 Apr 6. Review.


Associations of employment status and educational levels with mortality and hospitalization in the dialysis outcomes and practice patterns study in Japan.

Imanishi Y, Fukuma S, Karaboyas A, Robinson BM, Pisoni RL, Nomura T, Akiba T, Akizawa T, Kurokawa K, Saito A, Fukuhara S, Inaba M.

PLoS One. 2017 Mar 6;12(3):e0170731. doi: 10.1371/journal.pone.0170731. eCollection 2017.


Long-Term Administration of Eicosapentaenoic Acid Improves Post-Myocardial Infarction Cardiac Remodeling in Mice by Regulating Macrophage Polarization.

Takamura M, Kurokawa K, Ootsuji H, Inoue O, Okada H, Nomura A, Kaneko S, Usui S.

J Am Heart Assoc. 2017 Feb 21;6(2). pii: e004560. doi: 10.1161/JAHA.116.004560.


Differently localized lysophosphatidic acid acyltransferases crucial for triacylglycerol biosynthesis in the oleaginous alga Nannochloropsis.

Nobusawa T, Hori K, Mori H, Kurokawa K, Ohta H.

Plant J. 2017 May;90(3):547-559. doi: 10.1111/tpj.13512. Epub 2017 Mar 28.


Phylogenomics and Morphology of Extinct Paleognaths Reveal the Origin and Evolution of the Ratites.

Yonezawa T, Segawa T, Mori H, Campos PF, Hongoh Y, Endo H, Akiyoshi A, Kohno N, Nishida S, Wu J, Jin H, Adachi J, Kishino H, Kurokawa K, Nogi Y, Tanabe H, Mukoyama H, Yoshida K, Rasoamiaramanana A, Yamagishi S, Hayashi Y, Yoshida A, Koike H, Akishinonomiya F, Willerslev E, Hasegawa M.

Curr Biol. 2017 Jan 9;27(1):68-77. doi: 10.1016/j.cub.2016.10.029. Epub 2016 Dec 15.


Photoreceptor disc shedding in the living human eye.

Kocaoglu OP, Liu Z, Zhang F, Kurokawa K, Jonnal RS, Miller DT.

Biomed Opt Express. 2016 Oct 13;7(11):4554-4568. eCollection 2016 Nov 1.


The Relationship of Brimonidine Concentration in Vitreous Body to the Free Concentration in Retina/Choroid Following Topical Administration in Pigmented Rabbits.

Shinno K, Kurokawa K, Kozai S, Kawamura A, Inada K, Tokushige H.

Curr Eye Res. 2017 May;42(5):748-753. doi: 10.1080/02713683.2016.1238941. Epub 2016 Nov 17.


Establishment and Characterization of a Novel Caco-2 Subclone with a Similar Low Expression Level of Human Carboxylesterase 1 to Human Small Intestine.

Ohura K, Nishiyama H, Saco S, Kurokawa K, Imai T.

Drug Metab Dispos. 2016 Dec;44(12):1890-1898. Epub 2016 Sep 16.


Homeodomain-Interacting Protein Kinase-2: A Critical Regulator of the DNA Damage Response and the Epigenome.

Kuwano Y, Nishida K, Akaike Y, Kurokawa K, Nishikawa T, Masuda K, Rokutan K.

Int J Mol Sci. 2016 Sep 27;17(10). pii: E1638. Review.

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