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Items: 34

1.

PNLDC1, mouse pre-piRNA Trimmer, is required for meiotic and post-meiotic male germ cell development.

Nishimura T, Nagamori I, Nakatani T, Izumi N, Tomari Y, Kuramochi-Miyagawa S, Nakano T.

EMBO Rep. 2018 Mar;19(3). pii: e44957. doi: 10.15252/embr.201744957. Epub 2018 Feb 14.

2.

Mouse GTSF1 is an essential factor for secondary piRNA biogenesis.

Yoshimura T, Watanabe T, Kuramochi-Miyagawa S, Takemoto N, Shiromoto Y, Kudo A, Kanai-Azuma M, Tashiro F, Miyazaki S, Katanaya A, Chuma S, Miyazaki JI.

EMBO Rep. 2018 Apr;19(4). pii: e42054. doi: 10.15252/embr.201642054. Epub 2018 Feb 7.

PMID:
29437694
3.

Roles of MIWI, MILI and PLD6 in small RNA regulation in mouse growing oocytes.

Kabayama Y, Toh H, Katanaya A, Sakurai T, Chuma S, Kuramochi-Miyagawa S, Saga Y, Nakano T, Sasaki H.

Nucleic Acids Res. 2017 May 19;45(9):5387-5398. doi: 10.1093/nar/gkx027.

4.

MIWI2 as an Effector of DNA Methylation and Gene Silencing in Embryonic Male Germ Cells.

Kojima-Kita K, Kuramochi-Miyagawa S, Nagamori I, Ogonuki N, Ogura A, Hasuwa H, Akazawa T, Inoue N, Nakano T.

Cell Rep. 2016 Sep 13;16(11):2819-2828. doi: 10.1016/j.celrep.2016.08.027.

5.

Comprehensive DNA Methylation Analysis of Retrotransposons in Male Germ Cells.

Nagamori I, Kobayashi H, Shiromoto Y, Nishimura T, Kuramochi-Miyagawa S, Kono T, Nakano T.

Cell Rep. 2015 Sep 8;12(10):1541-7. doi: 10.1016/j.celrep.2015.07.060. Epub 2015 Aug 28.

6.

Reply to Shoji and Katsuma.

Kuramochi-Miyagawa S, Nakano T.

Curr Biol. 2015 Aug 17;25(16):R710. doi: 10.1016/j.cub.2015.07.020.

7.

piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals.

Parrish NF, Fujino K, Shiromoto Y, Iwasaki YW, Ha H, Xing J, Makino A, Kuramochi-Miyagawa S, Nakano T, Siomi H, Honda T, Tomonaga K.

RNA. 2015 Oct;21(10):1691-703. doi: 10.1261/rna.052092.115. Epub 2015 Aug 17.

8.

Induction of DNA methylation by artificial piRNA production in male germ cells.

Itou D, Shiromoto Y, Yukiho SY, Ishii C, Nishimura T, Ogonuki N, Ogura A, Hasuwa H, Fujihara Y, Kuramochi-Miyagawa S, Nakano T.

Curr Biol. 2015 Mar 30;25(7):901-6. doi: 10.1016/j.cub.2015.01.060. Epub 2015 Mar 12.

9.

HSP90α plays an important role in piRNA biogenesis and retrotransposon repression in mouse.

Ichiyanagi T, Ichiyanagi K, Ogawa A, Kuramochi-Miyagawa S, Nakano T, Chuma S, Sasaki H, Udono H.

Nucleic Acids Res. 2014 Oct 29;42(19):11903-11. doi: 10.1093/nar/gku881. Epub 2014 Sep 27.

10.

DNA methylation in mouse testes.

Kuramochi-Miyagawa S, Kita-Kojima K, Shiromoto Y, Ito D, Koshima H, Nakano T.

Methods Mol Biol. 2014;1093:97-109. doi: 10.1007/978-1-62703-694-8_8.

PMID:
24178559
11.

The nuage mediates retrotransposon silencing in mouse primordial ovarian follicles.

Lim AK, Lorthongpanich C, Chew TG, Tan CW, Shue YT, Balu S, Gounko N, Kuramochi-Miyagawa S, Matzuk MM, Chuma S, Messerschmidt DM, Solter D, Knowles BB.

Development. 2013 Sep;140(18):3819-25. doi: 10.1242/dev.099184. Epub 2013 Aug 7.

12.

GPAT2, a mitochondrial outer membrane protein, in piRNA biogenesis in germline stem cells.

Shiromoto Y, Kuramochi-Miyagawa S, Daiba A, Chuma S, Katanaya A, Katsumata A, Nishimura K, Ohtaka M, Nakanishi M, Nakamura T, Yoshinaga K, Asada N, Nakamura S, Yasunaga T, Kojima-Kita K, Itou D, Kimura T, Nakano T.

RNA. 2013 Jun;19(6):803-10. doi: 10.1261/rna.038521.113. Epub 2013 Apr 23.

13.

Identification of MIWI-associated Poly(A) RNAs by immunoprecipitation with an anti-MIWI monoclonal antibody.

Nishibu T, Hayashida Y, Tani S, Kurono S, Kojima-Kita K, Ukekawa R, Kurokawa T, Kuramochi-Miyagawa S, Nakano T, Inoue K, Honda S.

Biosci Trends. 2012 Oct;6(5):248-61.

14.

Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus.

Yamamoto Y, Watanabe T, Hoki Y, Shirane K, Li Y, Ichiiyanagi K, Kuramochi-Miyagawa S, Toyoda A, Fujiyama A, Oginuma M, Suzuki H, Sado T, Nakano T, Sasaki H.

Genome Res. 2013 Feb;23(2):292-9. doi: 10.1101/gr.137224.112. Epub 2012 Nov 6.

15.

Locus- and domain-dependent control of DNA methylation at mouse B1 retrotransposons during male germ cell development.

Ichiyanagi K, Li Y, Watanabe T, Ichiyanagi T, Fukuda K, Kitayama J, Yamamoto Y, Kuramochi-Miyagawa S, Nakano T, Yabuta Y, Seki Y, Saitou M, Sasaki H.

Genome Res. 2011 Dec;21(12):2058-66. doi: 10.1101/gr.123679.111. Epub 2011 Oct 31. Erratum in: Genome Res. 2012 Apr;22(4):810. Li, Yungfeng [corrected to Li, Yufeng].

16.

Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis.

Tanaka T, Hosokawa M, Vagin VV, Reuter M, Hayashi E, Mochizuki AL, Kitamura K, Yamanaka H, Kondoh G, Okawa K, Kuramochi-Miyagawa S, Nakano T, Sachidanandam R, Hannon GJ, Pillai RS, Nakatsuji N, Chuma S.

Proc Natl Acad Sci U S A. 2011 Jun 28;108(26):10579-84. doi: 10.1073/pnas.1015447108. Epub 2011 Jun 13.

17.

Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus.

Watanabe T, Tomizawa S, Mitsuya K, Totoki Y, Yamamoto Y, Kuramochi-Miyagawa S, Iida N, Hoki Y, Murphy PJ, Toyoda A, Gotoh K, Hiura H, Arima T, Fujiyama A, Sado T, Shibata T, Nakano T, Lin H, Ichiyanagi K, Soloway PD, Sasaki H.

Science. 2011 May 13;332(6031):848-52. doi: 10.1126/science.1203919.

18.

MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline.

Watanabe T, Chuma S, Yamamoto Y, Kuramochi-Miyagawa S, Totoki Y, Toyoda A, Hoki Y, Fujiyama A, Shibata T, Sado T, Noce T, Nakano T, Nakatsuji N, Lin H, Sasaki H.

Dev Cell. 2011 Mar 15;20(3):364-75. doi: 10.1016/j.devcel.2011.01.005.

19.

MVH in piRNA processing and gene silencing of retrotransposons.

Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

Genes Dev. 2010 May;24(9):887-92. doi: 10.1101/gad.1902110.

20.

The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.

Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

Dev Cell. 2009 Dec;17(6):775-87. doi: 10.1016/j.devcel.2009.10.012.

21.

A broadly conserved pathway generates 3'UTR-directed primary piRNAs.

Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

Curr Biol. 2009 Dec 29;19(24):2066-76. doi: 10.1016/j.cub.2009.11.064.

22.

Gtsf1/Cue110, a gene encoding a protein with two copies of a CHHC Zn-finger motif, is involved in spermatogenesis and retrotransposon suppression in murine testes.

Yoshimura T, Toyoda S, Kuramochi-Miyagawa S, Miyazaki T, Miyazaki S, Tashiro F, Yamato E, Nakano T, Miyazaki J.

Dev Biol. 2009 Nov 1;335(1):216-27. doi: 10.1016/j.ydbio.2009.09.003. Epub 2009 Sep 6.

23.

Associations between PIWI proteins and TDRD1/MTR-1 are critical for integrated subcellular localization in murine male germ cells.

Kojima K, Kuramochi-Miyagawa S, Chuma S, Tanaka T, Nakatsuji N, Kimura T, Nakano T.

Genes Cells. 2009 Oct;14(10):1155-65. doi: 10.1111/j.1365-2443.2009.01342.x. Epub 2009 Sep 7.

24.

RNA silencing in germlines--exquisite collaboration of Argonaute proteins with small RNAs for germline survival.

Siomi MC, Kuramochi-Miyagawa S.

Curr Opin Cell Biol. 2009 Jun;21(3):426-34. doi: 10.1016/j.ceb.2009.02.003. Epub 2009 Mar 19. Review.

PMID:
19303759
25.

MILI, a PIWI-interacting RNA-binding protein, is required for germ line stem cell self-renewal and appears to positively regulate translation.

Unhavaithaya Y, Hao Y, Beyret E, Yin H, Kuramochi-Miyagawa S, Nakano T, Lin H.

J Biol Chem. 2009 Mar 6;284(10):6507-19. doi: 10.1074/jbc.M809104200. Epub 2008 Dec 29.

26.

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes.

Watanabe T, Totoki Y, Toyoda A, Kaneda M, Kuramochi-Miyagawa S, Obata Y, Chiba H, Kohara Y, Kono T, Nakano T, Surani MA, Sakaki Y, Sasaki H.

Nature. 2008 May 22;453(7194):539-43. doi: 10.1038/nature06908. Epub 2008 Apr 10.

PMID:
18404146
27.

DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Totoki Y, Toyoda A, Ikawa M, Asada N, Kojima K, Yamaguchi Y, Ijiri TW, Hata K, Li E, Matsuda Y, Kimura T, Okabe M, Sakaki Y, Sasaki H, Nakano T.

Genes Dev. 2008 Apr 1;22(7):908-17. doi: 10.1101/gad.1640708.

28.

[PiRNA in spermatogenesis].

Kuramochi-Miyagawa S, Gotoh K, Kimura T, Nakano T.

Tanpakushitsu Kakusan Koso. 2007 Dec;52(16 Suppl):2097-101. Japanese. No abstract available.

PMID:
21089278
29.

Precancerous stem cells have the potential for both benign and malignant differentiation.

Chen L, Shen R, Ye Y, Pu XA, Liu X, Duan W, Wen J, Zimmerer J, Wang Y, Liu Y, Lasky LC, Heerema NA, Perrotti D, Ozato K, Kuramochi-Miyagawa S, Nakano T, Yates AJ, Carson WE 3rd, Lin H, Barsky SH, Gao JX.

PLoS One. 2007 Mar 14;2(3):e293.

30.

Characterization of the piRNA complex from rat testes.

Lau NC, Seto AG, Kim J, Kuramochi-Miyagawa S, Nakano T, Bartel DP, Kingston RE.

Science. 2006 Jul 21;313(5785):363-7. Epub 2006 Jun 15.

31.

A novel class of small RNAs bind to MILI protein in mouse testes.

Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.

Nature. 2006 Jul 13;442(7099):203-7. Epub 2006 Jun 4.

PMID:
16751777
32.

Mili, a mammalian member of piwi family gene, is essential for spermatogenesis.

Kuramochi-Miyagawa S, Kimura T, Ijiri TW, Isobe T, Asada N, Fujita Y, Ikawa M, Iwai N, Okabe M, Deng W, Lin H, Matsuda Y, Nakano T.

Development. 2004 Feb;131(4):839-49. Epub 2004 Jan 21.

33.

Two mouse piwi-related genes: miwi and mili.

Kuramochi-Miyagawa S, Kimura T, Yomogida K, Kuroiwa A, Tadokoro Y, Fujita Y, Sato M, Matsuda Y, Nakano T.

Mech Dev. 2001 Oct;108(1-2):121-33.

34.

Deficiency of a STE20/PAK family kinase LOK leads to the acceleration of LFA-1 clustering and cell adhesion of activated lymphocytes.

Endo J, Toyama-Sorimachi N, Taya C, Kuramochi-Miyagawa S, Nagata K, Kuida K, Takashi T, Yonekawa H, Yoshizawa Y, Miyasaka N, Karasuyama H.

FEBS Lett. 2000 Feb 25;468(2-3):234-8.

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