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Items: 1 to 50 of 101

1.

Added Value of 50-Gene Panel Sequencing to Distinguish Multiple Primary Lung Cancers from Pulmonary Metastases: A Systematic Investigation.

Roepman P, Ten Heuvel A, Scheidel KC, Sprong T, Heideman DAM, Seldenrijk KA, Herder GJM, Kummer JA.

J Mol Diagn. 2018 Jul;20(4):436-445. doi: 10.1016/j.jmoldx.2018.02.007. Epub 2018 Apr 3.

PMID:
29625247
2.

Molecular clonality assessment shows high performance to predict malignant B-cell non-Hodgkin's lymphoma using cytological smears.

Roepman P, Boots CM, Scheidel KC, Sprong T, de Bruin P, de Weerdt O, Groenen PJ, Kummer JA.

J Clin Pathol. 2016 Dec;69(12):1109-1115. doi: 10.1136/jclinpath-2016-203757. Epub 2016 May 11.

PMID:
27169754
3.

Different cutoff values for thyroid transcription factor-1 antibodies in the diagnosis of lung adenocarcinoma.

Smits AJ, Vink A, Tolenaars G, Herder GJ, Kummer JA.

Appl Immunohistochem Mol Morphol. 2015 Jul;23(6):416-21. doi: 10.1097/PAI.0000000000000099.

PMID:
25356948
4.

A validated new histological classification for intervertebral disc degeneration.

Rutges JP, Duit RA, Kummer JA, Bekkers JE, Oner FC, Castelein RM, Dhert WJ, Creemers LB.

Osteoarthritis Cartilage. 2013 Dec;21(12):2039-47. doi: 10.1016/j.joca.2013.10.001. Epub 2013 Oct 10.

5.

The estimation of tumor cell percentage for molecular testing by pathologists is not accurate.

Smits AJ, Kummer JA, de Bruin PC, Bol M, van den Tweel JG, Seldenrijk KA, Willems SM, Offerhaus GJ, de Weger RA, van Diest PJ, Vink A.

Mod Pathol. 2014 Feb;27(2):168-74. doi: 10.1038/modpathol.2013.134. Epub 2013 Jul 26.

6.

[Lung cancer staging by endobronchial ultrasound with transbronchial needle aspiration].

Claessens NJ, Maas KW, Kummer JA, Schramel FM.

Ned Tijdschr Geneeskd. 2012;156(46):A4741. Dutch.

PMID:
23151327
7.

Validation of a gene expression signature for assessment of lymph node metastasis in oral squamous cell carcinoma.

van Hooff SR, Leusink FK, Roepman P, Baatenburg de Jong RJ, Speel EJ, van den Brekel MW, van Velthuysen ML, van Diest PJ, van Es RJ, Merkx MA, Kummer JA, Leemans CR, Schuuring E, Langendijk JA, Lacko M, De Herdt MJ, Jansen JC, Brakenhoff RH, Slootweg PJ, Takes RP, Holstege FC.

J Clin Oncol. 2012 Nov 20;30(33):4104-10. doi: 10.1200/JCO.2011.40.4509. Epub 2012 Oct 8.

PMID:
23045589
8.

EGFR and KRAS mutations in lung carcinomas in the Dutch population: increased EGFR mutation frequency in malignant pleural effusion of lung adenocarcinoma.

Smits AJ, Kummer JA, Hinrichs JW, Herder GJ, Scheidel-Jacobse KC, Jiwa NM, Ruijter TE, Nooijen PT, Looijen-Salamon MG, Ligtenberg MJ, Thunnissen FB, Heideman DA, de Weger RA, Vink A.

Cell Oncol (Dordr). 2012 Jun;35(3):189-96. doi: 10.1007/s13402-012-0078-4. Epub 2012 Apr 12.

9.

Intracellular serine protease inhibitor SERPINB4 inhibits granzyme M-induced cell death.

de Koning PJ, Kummer JA, de Poot SA, Quadir R, Broekhuizen R, McGettrick AF, Higgins WJ, Devreese B, Worrall DM, Bovenschen N.

PLoS One. 2011;6(8):e22645. doi: 10.1371/journal.pone.0022645. Epub 2011 Aug 3.

10.

Human Papillomavirus and Oropharyngeal Squamous Cell Carcinoma: A Case-Control Study regarding Tobacco and Alcohol Consumption.

Farshadpour F, Konings S, Speel EJ, Hordijk GJ, Koole R, van Blokland M, Slootweg PJ, Kummer JA.

Patholog Res Int. 2011;2011:806345. doi: 10.4061/2011/806345. Epub 2011 Jul 12.

11.

Spatial differences in the presence of FOXP3+ and GranzymeB+ T cells between the intra- and extravascular compartments in renal allograft vasculopathy.

de Boer OJ, Teeling P, Jansen M, Ploegmakers H, van der Loos CM, Kummer JA, Florquin S, van der Wal AC.

PLoS One. 2011 Apr 6;6(4):e18656. doi: 10.1371/journal.pone.0018656.

12.

Noncytotoxic inhibition of cytomegalovirus replication through NK cell protease granzyme M-mediated cleavage of viral phosphoprotein 71.

van Domselaar R, Philippen LE, Quadir R, Wiertz EJ, Kummer JA, Bovenschen N.

J Immunol. 2010 Dec 15;185(12):7605-13. doi: 10.4049/jimmunol.1001503. Epub 2010 Nov 8.

13.

Apical CD36 immunolocalization in human and porcine taste buds from circumvallate and foliate papillae.

Simons PJ, Kummer JA, Luiken JJ, Boon L.

Acta Histochem. 2011 Dec;113(8):839-43. doi: 10.1016/j.acthis.2010.08.006. Epub 2010 Oct 14.

PMID:
20950842
14.

Micro-CT quantification of subchondral endplate changes in intervertebral disc degeneration.

Rutges JP, Jagt van der OP, Oner FC, Verbout AJ, Castelein RJ, Kummer JA, Weinans H, Creemers LB, Dhert WJ.

Osteoarthritis Cartilage. 2011 Jan;19(1):89-95. doi: 10.1016/j.joca.2010.09.010. Epub 2010 Oct 13.

15.

Hair follicles as a niche of Staphylococcus aureus in the nose; is a more effective decolonisation strategy needed?

Ten Broeke-Smits NJ, Kummer JA, Bleys RL, Fluit AC, Boel CH.

J Hosp Infect. 2010 Nov;76(3):211-4. doi: 10.1016/j.jhin.2010.07.011.

PMID:
20864209
16.

Hypertrophic differentiation and calcification during intervertebral disc degeneration.

Rutges JP, Duit RA, Kummer JA, Oner FC, van Rijen MH, Verbout AJ, Castelein RM, Dhert WJ, Creemers LB.

Osteoarthritis Cartilage. 2010 Nov;18(11):1487-95. doi: 10.1016/j.joca.2010.08.006. Epub 2010 Aug 17.

17.

Orphan granzymes find a home.

Bovenschen N, Kummer JA.

Immunol Rev. 2010 May;235(1):117-27. doi: 10.1111/j.0105-2896.2010.00889.x. Review.

PMID:
20536559
18.

In vivo bladder cancer diagnosis by high-volume Raman spectroscopy.

Draga RO, Grimbergen MC, Vijverberg PL, van Swol CF, Jonges TG, Kummer JA, Ruud Bosch JL.

Anal Chem. 2010 Jul 15;82(14):5993-9. doi: 10.1021/ac100448p.

PMID:
20524627
19.

The cytotoxic protease granzyme M is expressed by lymphocytes of both the innate and adaptive immune system.

de Koning PJ, Tesselaar K, Bovenschen N, Colak S, Quadir R, Volman TJ, Kummer JA.

Mol Immunol. 2010 Jan;47(4):903-11. doi: 10.1016/j.molimm.2009.10.001. Epub 2009 Nov 5.

PMID:
19896187
20.

Regulation of vitamin D receptor function in MEN1-related parathyroid adenomas.

Dreijerink KM, Varier RA, van Nuland R, Broekhuizen R, Valk GD, van der Wal JE, Lips CJ, Kummer JA, Timmers HT.

Mol Cell Endocrinol. 2009 Dec 10;313(1-2):1-8. doi: 10.1016/j.mce.2009.08.020. Epub 2009 Sep 1.

PMID:
19729047
21.

Biology of granzyme M: a serine protease with unique features.

de Koning PJ, Kummer JA, Bovenschen N.

Crit Rev Immunol. 2009;29(4):307-15. Review.

PMID:
19673685
22.

The multiple endocrine neoplasia type 1 (MEN1) tumor suppressor regulates peroxisome proliferator-activated receptor gamma-dependent adipocyte differentiation.

Dreijerink KM, Varier RA, van Beekum O, Jeninga EH, Höppener JW, Lips CJ, Kummer JA, Kalkhoven E, Timmers HT.

Mol Cell Biol. 2009 Sep;29(18):5060-9. doi: 10.1128/MCB.01001-08. Epub 2009 Jul 13.

23.

Downregulation of SERPINB13 expression in head and neck squamous cell carcinomas associates with poor clinical outcome.

de Koning PJ, Bovenschen N, Leusink FK, Broekhuizen R, Quadir R, van Gemert JT, Hordijk GJ, Chang WS, van der Tweel I, Tilanus MG, Kummer JA.

Int J Cancer. 2009 Oct 1;125(7):1542-50. doi: 10.1002/ijc.24507.

24.

Serine protease inhibitor 8 is a novel immunohistochemical marker for neuroendocrine tumors of the pancreas.

de Koning PJ, Bovenschen N, Broekhuizen R, Lips CJ, Kummer JA.

Pancreas. 2009 May;38(4):461-7. doi: 10.1097/MPA.0b013e318194fcc2.

PMID:
19188865
25.

Granzyme K displays highly restricted substrate specificity that only partially overlaps with granzyme A.

Bovenschen N, Quadir R, van den Berg AL, Brenkman AB, Vandenberghe I, Devreese B, Joore J, Kummer JA.

J Biol Chem. 2009 Feb 6;284(6):3504-12. doi: 10.1074/jbc.M806716200. Epub 2008 Dec 5.

26.

[Evolution of patients with long-term methadone substitution].

Coste JM, Kummer JA, Kraemer M, Porchet PA.

Rev Med Suisse. 2008 Oct 15;4(175):2225-8. French.

PMID:
19024578
27.

Late (> 5 years) regional lymph node metastasis of oral squamous cell carcinoma (SCC), proven by p53 mutation analysis.

Hoekstra JW, Kummer JA, van Es RJ.

J Craniomaxillofac Surg. 2008 Oct;36(7):415-8. doi: 10.1016/j.jcms.2008.04.002. Epub 2008 Jun 13.

PMID:
18554920
28.

NK cell protease granzyme M targets alpha-tubulin and disorganizes the microtubule network.

Bovenschen N, de Koning PJ, Quadir R, Broekhuizen R, Damen JM, Froelich CJ, Slijper M, Kummer JA.

J Immunol. 2008 Jun 15;180(12):8184-91.

29.

Increased MMP-2 activity during intervertebral disc degeneration is correlated to MMP-14 levels.

Rutges JP, Kummer JA, Oner FC, Verbout AJ, Castelein RJ, Roestenburg HJ, Dhert WJ, Creemers LB.

J Pathol. 2008 Mar;214(4):523-30. doi: 10.1002/path.2317.

PMID:
18200629
30.

Expression of c-FLIP is primarily detected in diffuse large B-cell lymphoma and Hodgkin's lymphoma and correlates with lack of caspase 8 activation.

van Houdt IS, Muris JJ, Hesselink AT, Kramer D, Cillessen SA, Moesbergen LM, Vos W, Hooijberg E, Meijer CJ, Kummer JA, Oudejans JJ.

Histopathology. 2007 Dec;51(6):778-84.

PMID:
18042067
31.

DNA copy number status is a powerful predictor of poor survival in endocrine pancreatic tumor patients.

Jonkers YM, Claessen SM, Perren A, Schmitt AM, Hofland LJ, de Herder W, de Krijger RR, Verhofstad AA, Hermus AR, Kummer JA, Skogseid B, Volante M, Voogd AC, Ramaekers FC, Speel EJ.

Endocr Relat Cancer. 2007 Sep;14(3):769-79.

32.
33.

Ear piercing techniques and their effect on cartilage, a histologic study.

van Wijk MP, Kummer JA, Kon M.

J Plast Reconstr Aesthet Surg. 2008;61 Suppl 1:S104-9. Epub 2007 Aug 2.

PMID:
17684004
34.

Human mast cells produce and release the cytotoxic lymphocyte associated protease granzyme B upon activation.

Strik MC, de Koning PJ, Kleijmeer MJ, Bladergroen BA, Wolbink AM, Griffith JM, Wouters D, Fukuoka Y, Schwartz LB, Hack CE, van Ham SM, Kummer JA.

Mol Immunol. 2007 Jul;44(14):3462-72. Epub 2007 May 7.

PMID:
17485116
35.

Ectopic expression of the serine protease inhibitor PI9 modulates death receptor-mediated apoptosis.

Kummer JA, Micheau O, Schneider P, Bovenschen N, Broekhuizen R, Quadir R, Strik MC, Hack CE, Tschopp J.

Cell Death Differ. 2007 Aug;14(8):1486-96. Epub 2007 May 4.

36.

Activation of the IL-1beta-processing inflammasome is involved in contact hypersensitivity.

Watanabe H, Gaide O, Pétrilli V, Martinon F, Contassot E, Roques S, Kummer JA, Tschopp J, French LE.

J Invest Dermatol. 2007 Aug;127(8):1956-63. Epub 2007 Apr 12.

37.

Re: Tissue banks trigger worry about ownership issues.

van Diest PJ, Kummer JA, Voest EE.

J Natl Cancer Inst. 2007 Feb 7;99(3):253. No abstract available.

PMID:
17284720
38.

Expression of cellular FLICE inhibitory protein, caspase-8, and protease inhibitor-9 in Ewing sarcoma and implications for susceptibility to cytotoxic pathways.

de Hooge AS, Berghuis D, Santos SJ, Mooiman E, Romeo S, Kummer JA, Egeler RM, van Tol MJ, Melief CJ, Hogendoorn PC, Lankester AC.

Clin Cancer Res. 2007 Jan 1;13(1):206-14.

39.

Inflammasome components NALP 1 and 3 show distinct but separate expression profiles in human tissues suggesting a site-specific role in the inflammatory response.

Kummer JA, Broekhuizen R, Everett H, Agostini L, Kuijk L, Martinon F, van Bruggen R, Tschopp J.

J Histochem Cytochem. 2007 May;55(5):443-52. Epub 2006 Dec 12.

PMID:
17164409
40.

Dissection of a metastatic gene expression signature into distinct components.

Roepman P, de Koning E, van Leenen D, de Weger RA, Kummer JA, Slootweg PJ, Holstege FC.

Genome Biol. 2006;7(12):R117.

41.

Maintenance of head and neck tumor gene expression profiles upon lymph node metastasis.

Roepman P, de Jager A, Groot Koerkamp MJ, Kummer JA, Slootweg PJ, Holstege FC.

Cancer Res. 2006 Dec 1;66(23):11110-4.

42.

Expression of the granzyme B inhibitor PI9 predicts outcome in nasal NK/T-cell lymphoma: results of a Western series of 48 patients treated with first-line polychemotherapy within the Groupe d'Etude des Lymphomes de l'Adulte (GELA) trials.

Bossard C, Belhadj K, Reyes F, Martin-Garcia N, Berger F, Kummer JA, Brière J, Baglin AC, Cheze S, Bosq J, Ribrag V, Gisselbrecht C, Mounier N, Gaulard P.

Blood. 2007 Mar 1;109(5):2183-9. Epub 2006 Oct 31.

43.

Reproductive endocrine dysfunction in Atlantic croaker exposed to hypoxia.

Thomas P, Rahman MS, Kummer JA, Lawson S.

Mar Environ Res. 2006 Jul;62 Suppl:S249-52. Epub 2006 Apr 18.

PMID:
16764918
44.

Performance of immuno-positron emission tomography with zirconium-89-labeled chimeric monoclonal antibody U36 in the detection of lymph node metastases in head and neck cancer patients.

Börjesson PK, Jauw YW, Boellaard R, de Bree R, Comans EF, Roos JC, Castelijns JA, Vosjan MJ, Kummer JA, Leemans CR, Lammertsma AA, van Dongen GA.

Clin Cancer Res. 2006 Apr 1;12(7 Pt 1):2133-40.

45.

Expression of the apoptosis inhibitor protease inhibitor 9 predicts clinical outcome in vaccinated patients with stage III and IV melanoma.

van Houdt IS, Oudejans JJ, van den Eertwegh AJ, Baars A, Vos W, Bladergroen BA, Rimoldi D, Muris JJ, Hooijberg E, Gundy CM, Meijer CJ, Kummer JA.

Clin Cancer Res. 2005 Sep 1;11(17):6400-7.

46.

Nonresolving pneumonia in mycoplasma pneumoniae infection resembling a lung tumor.

Susanto CR, Vonk-Noordegraaf A, Kummer JA, Boonstra A.

Respiration. 2006;73(2):247. Epub 2005 Aug 29. No abstract available.

PMID:
16131788
47.

The granzyme B inhibitor proteinase inhibitor 9 (PI9) is expressed by human mast cells.

Bladergroen BA, Strik MC, Wolbink AM, Wouters D, Broekhuizen R, Kummer JA, Hack CE.

Eur J Immunol. 2005 Apr;35(4):1175-83.

48.

Immunohistochemical profiling of caspase signaling pathways predicts clinical response to chemotherapy in primary nodal diffuse large B-cell lymphomas.

Muris JJ, Cillessen SA, Vos W, van Houdt IS, Kummer JA, van Krieken JH, Jiwa NM, Jansen PM, Kluin-Nelemans HC, Ossenkoppele GJ, Gundy C, Meijer CJ, Oudejans JJ.

Blood. 2005 Apr 1;105(7):2916-23. Epub 2004 Dec 2.

49.
50.

Molecular diagnosis of surgical margins and local recurrence in head and neck cancer patients: a prospective study.

van Houten VM, Leemans CR, Kummer JA, Dijkstra J, Kuik DJ, van den Brekel MW, Snow GB, Brakenhoff RH.

Clin Cancer Res. 2004 Jun 1;10(11):3614-20.

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