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Items: 45

1.

Nuts and Bolts of Protein Quantification by Online Trypsin Digestion Coupled LC-MS/MS Analysis.

Toth CA, Kuklenyik Z, Barr JR.

Methods Mol Biol. 2019;1871:295-311. doi: 10.1007/978-1-4939-8814-3_19.

PMID:
30276747
2.

CETP Inhibition Improves HDL Function but Leads to Fatty Liver and Insulin Resistance in CETP-Expressing Transgenic Mice on a High-Fat Diet.

Zhu L, Luu T, Emfinger CH, Parks BA, Shi J, Trefts E, Zeng F, Kuklenyik Z, Harris RC, Wasserman DH, Fazio S, Stafford JM.

Diabetes. 2018 Dec;67(12):2494-2506. doi: 10.2337/db18-0474. Epub 2018 Sep 13.

PMID:
30213825
3.

Comparability of Lipoprotein Particle Number Concentrations Across ES-DMA, NMR, LC-MS/MS, Immunonephelometry, and VAP: In Search of a Candidate Reference Measurement Procedure for apoB and non-HDL-P Standardization.

Delatour V, Clouet-Foraison N, Gaie-Levrel F, Marcovina SM, Hoofnagle AN, Kuklenyik Z, Caulfield MP, Otvos JD, Krauss RM, Kulkarni KR, Contois JH, Remaley AT, Vesper HW, Cobbaert CM, Gillery P.

Clin Chem. 2018 Oct;64(10):1485-1495. doi: 10.1373/clinchem.2018.288746. Epub 2018 Aug 7.

PMID:
30087138
4.

Core lipid, surface lipid and apolipoprotein composition analysis of lipoprotein particles as a function of particle size in one workflow integrating asymmetric flow field-flow fractionation and liquid chromatography-tandem mass spectrometry.

Kuklenyik Z, Jones JI, Gardner MS, Schieltz DM, Parks BA, Toth CA, Rees JC, Andrews ML, Carter K, Lehtikoski AK, McWilliams LG, Williamson YM, Bierbaum KP, Pirkle JL, Barr JR.

PLoS One. 2018 Apr 10;13(4):e0194797. doi: 10.1371/journal.pone.0194797. eCollection 2018.

5.

Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.

Bowden JA, Heckert A, Ulmer CZ, Jones CM, Koelmel JP, Abdullah L, Ahonen L, Alnouti Y, Armando AM, Asara JM, Bamba T, Barr JR, Bergquist J, Borchers CH, Brandsma J, Breitkopf SB, Cajka T, Cazenave-Gassiot A, Checa A, Cinel MA, Colas RA, Cremers S, Dennis EA, Evans JE, Fauland A, Fiehn O, Gardner MS, Garrett TJ, Gotlinger KH, Han J, Huang Y, Neo AH, Hyötyläinen T, Izumi Y, Jiang H, Jiang H, Jiang J, Kachman M, Kiyonami R, Klavins K, Klose C, Köfeler HC, Kolmert J, Koal T, Koster G, Kuklenyik Z, Kurland IJ, Leadley M, Lin K, Maddipati KR, McDougall D, Meikle PJ, Mellett NA, Monnin C, Moseley MA, Nandakumar R, Oresic M, Patterson R, Peake D, Pierce JS, Post M, Postle AD, Pugh R, Qiu Y, Quehenberger O, Ramrup P, Rees J, Rembiesa B, Reynaud D, Roth MR, Sales S, Schuhmann K, Schwartzman ML, Serhan CN, Shevchenko A, Somerville SE, St John-Williams L, Surma MA, Takeda H, Thakare R, Thompson JW, Torta F, Triebl A, Trötzmüller M, Ubhayasekera SJK, Vuckovic D, Weir JM, Welti R, Wenk MR, Wheelock CE, Yao L, Yuan M, Zhao XH, Zhou S.

J Lipid Res. 2017 Dec;58(12):2275-2288. doi: 10.1194/jlr.M079012. Epub 2017 Oct 6.

6.

Simultaneous Quantification of Free Cholesterol, Cholesteryl Esters, and Triglycerides without Ester Hydrolysis by UHPLC Separation and In-Source Collision Induced Dissociation Coupled MS/MS.

Gardner MS, McWilliams LG, Jones JI, Kuklenyik Z, Pirkle JL, Barr JR.

J Am Soc Mass Spectrom. 2017 Nov;28(11):2319-2329. doi: 10.1007/s13361-017-1756-2. Epub 2017 Aug 11.

7.

High throughput quantification of apolipoproteins A-I and B-100 by isotope dilution MS targeting fast trypsin releasable peptides without reduction and alkylation.

Parks BA, Schieltz DM, Andrews ML, Gardner MS, Rees JC, Toth CA, Jones JI, McWilliams LG, Kuklenyik Z, Pirkle JL, Barr JR.

Proteomics Clin Appl. 2017 Jul;11(7-8). doi: 10.1002/prca.201600128. Epub 2017 Apr 3.

8.

On-column trypsin digestion coupled with LC-MS/MS for quantification of apolipoproteins.

Toth CA, Kuklenyik Z, Jones JI, Parks BA, Gardner MS, Schieltz DM, Rees JC, Andrews ML, McWilliams LG, Pirkle JL, Barr JR.

J Proteomics. 2017 Jan 6;150:258-267. doi: 10.1016/j.jprot.2016.09.011. Epub 2016 Sep 23.

PMID:
27667389
9.

The effects of apolipoprotein B depletion on HDL subspecies composition and function.

Davidson WS, Heink A, Sexmith H, Melchior JT, Gordon SM, Kuklenyik Z, Woollett L, Barr JR, Jones JI, Toth CA, Shah AS.

J Lipid Res. 2016 Apr;57(4):674-86. doi: 10.1194/jlr.M066613. Epub 2016 Feb 23. Erratum in: J Lipid Res. 2016 Jul;57(7):1322.

10.

Quantification of ricin, RCA and comparison of enzymatic activity in 18 Ricinus communis cultivars by isotope dilution mass spectrometry.

Schieltz DM, McWilliams LG, Kuklenyik Z, Prezioso SM, Carter AJ, Williamson YM, McGrath SC, Morse SA, Barr JR.

Toxicon. 2015 Mar;95:72-83. doi: 10.1016/j.toxicon.2015.01.003. Epub 2015 Jan 7.

11.

Two-dimensional high performance liquid chromatography separation and tandem mass spectrometry detection of atrazine and its metabolic and hydrolysis products in urine.

Kuklenyik Z, Panuwet P, Jayatilaka NK, Pirkle JL, Calafat AM.

J Chromatogr B Analyt Technol Biomed Life Sci. 2012 Jul 15;901:1-8. doi: 10.1016/j.jchromb.2012.05.028. Epub 2012 Jun 2.

12.
13.

Durable protection from vaginal simian-human immunodeficiency virus infection in macaques by tenofovir gel and its relationship to drug levels in tissue.

Dobard C, Sharma S, Martin A, Pau CP, Holder A, Kuklenyik Z, Lipscomb J, Hanson DL, Smith J, Novembre FJ, García-Lerma JG, Heneine W.

J Virol. 2012 Jan;86(2):718-25. doi: 10.1128/JVI.05842-11. Epub 2011 Nov 9.

14.

Trends in exposure to polyfluoroalkyl chemicals in the U.S. Population: 1999-2008.

Kato K, Wong LY, Jia LT, Kuklenyik Z, Calafat AM.

Environ Sci Technol. 2011 Oct 1;45(19):8037-45. doi: 10.1021/es1043613. Epub 2011 Apr 6.

PMID:
21469664
15.

Quantitative mass spectrometry for bacterial protein toxins--a sensitive, specific, high-throughput tool for detection and diagnosis.

Boyer AE, Gallegos-Candela M, Lins RC, Kuklenyik Z, Woolfitt A, Moura H, Kalb S, Quinn CP, Barr JR.

Molecules. 2011 Mar 14;16(3):2391-413. doi: 10.3390/molecules16032391. Review.

16.

Comparison of MALDI-TOF-MS and HPLC-ESI-MS/MS for endopeptidase activity-based quantification of Anthrax lethal factor in serum.

Kuklenyik Z, Boyer AE, Lins R, Quinn CP, Gallegos-Candela M, Woolfitt A, Pirkle JL, Barr JR.

Anal Chem. 2011 Mar 1;83(5):1760-5. doi: 10.1021/ac1030144. Epub 2011 Feb 8.

PMID:
21302970
17.

Intermittent prophylaxis with oral truvada protects macaques from rectal SHIV infection.

García-Lerma JG, Cong ME, Mitchell J, Youngpairoj AS, Zheng Q, Masciotra S, Martin A, Kuklenyik Z, Holder A, Lipscomb J, Pau CP, Barr JR, Hanson DL, Otten R, Paxton L, Folks TM, Heneine W.

Sci Transl Med. 2010 Jan 13;2(14):14ra4. doi: 10.1126/scitranslmed.3000391.

18.

Integrated microfluidic enzyme reactor mass spectrometry platform for detection of anthrax lethal factor.

Aravamudhan S, Joseph PJ, Kuklenyik Z, Boyer AE, Barr JR.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:1071-4. doi: 10.1109/IEMBS.2009.5335064.

PMID:
19965140
19.

On-line coupling of anion exchange and ion-pair chromatography for measurement of intracellular triphosphate metabolites of reverse transcriptase inhibitors.

Kuklenyik Z, Martin A, Pau CP, Holder A, Youngpairoj AS, Zheng Q, Cong ME, Garcia-Lerma JG, Heneine W, Pirkle JL, Barr JR.

J Chromatogr B Analyt Technol Biomed Life Sci. 2009 Nov 1;877(29):3659-66. doi: 10.1016/j.jchromb.2009.09.007. Epub 2009 Sep 11.

PMID:
19783232
20.

Effect of mobile phase pH and organic content on LC-MS analysis of nucleoside and nucleotide HIV reverse transcriptase inhibitors.

Kuklenyik Z, Martin A, Pau CP, Garcia-Lerma JG, Heneine W, Pirkle JL, Barr JR.

J Chromatogr Sci. 2009 May-Jun;47(5):365-72.

PMID:
19476704
21.

Polyfluoroalkyl chemicals in the serum and milk of breastfeeding women.

von Ehrenstein OS, Fenton SE, Kato K, Kuklenyik Z, Calafat AM, Hines EP.

Reprod Toxicol. 2009 Jun;27(3-4):239-45. doi: 10.1016/j.reprotox.2009.03.001. Epub 2009 Mar 6.

PMID:
19429402
22.

Automated solid-phase extraction approaches for large scale biomonitoring studies.

Kuklenyik Z, Ye X, Needham LL, Calafat AM.

J Chromatogr Sci. 2009 Jan;47(1):12-8. Review.

PMID:
19161651
23.
24.

SPE/SPME-GC/MS approach for measuring musk compounds in serum and breast milk.

Kuklenyik Z, Bryant XA, Needham LL, Calafat AM.

J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Oct 15;858(1-2):177-83. Epub 2007 Aug 26.

PMID:
17870677
25.

Determinants of fetal exposure to polyfluoroalkyl compounds in Baltimore, Maryland.

Apelberg BJ, Goldman LR, Calafat AM, Herbstman JB, Kuklenyik Z, Heidler J, Needham LL, Halden RU, Witter FR.

Environ Sci Technol. 2007 Jun 1;41(11):3891-7.

PMID:
17612165
26.

Serum concentrations of 11 polyfluoroalkyl compounds in the u.s. population: data from the national health and nutrition examination survey (NHANES).

Calafat AM, Kuklenyik Z, Reidy JA, Caudill SP, Tully JS, Needham LL.

Environ Sci Technol. 2007 Apr 1;41(7):2237-42.

PMID:
17438769
27.

Gestational PFOA exposure of mice is associated with altered mammary gland development in dams and female offspring.

White SS, Calafat AM, Kuklenyik Z, Villanueva L, Zehr RD, Helfant L, Strynar MJ, Lindstrom AB, Thibodeaux JR, Wood C, Fenton SE.

Toxicol Sci. 2007 Mar;96(1):133-44. Epub 2006 Nov 28.

PMID:
17132714
28.

Developmental toxicity of perfluorooctanoic acid in the CD-1 mouse after cross-foster and restricted gestational exposures.

Wolf CJ, Fenton SE, Schmid JE, Calafat AM, Kuklenyik Z, Bryant XA, Thibodeaux J, Das KP, White SS, Lau CS, Abbott BD.

Toxicol Sci. 2007 Feb;95(2):462-73. Epub 2006 Nov 10.

PMID:
17098816
29.

Quantification of the urinary concentrations of parabens in humans by on-line solid phase extraction-high performance liquid chromatography-isotope dilution tandem mass spectrometry.

Ye X, Kuklenyik Z, Bishop AM, Needham LL, Calafat AM.

J Chromatogr B Analyt Technol Biomed Life Sci. 2006 Nov 21;844(1):53-9. Epub 2006 Aug 7.

PMID:
16893688
30.

Perfluorochemicals in pooled serum samples from United States residents in 2001 and 2002.

Calafat AM, Kuklenyik Z, Caudill SP, Reidy JA, Needham LL.

Environ Sci Technol. 2006 Apr 1;40(7):2128-34.

PMID:
16646443
31.

Human exposure assessment to environmental chemicals using biomonitoring.

Calafat AM, Ye X, Silva MJ, Kuklenyik Z, Needham LL.

Int J Androl. 2006 Feb;29(1):166-71; discussion 181-5. Review.

PMID:
16466536
32.

Measuring environmental phenols and chlorinated organic chemicals in breast milk using automated on-line column-switching-high performance liquid chromatography-isotope dilution tandem mass spectrometry.

Ye X, Kuklenyik Z, Needham LL, Calafat AM.

J Chromatogr B Analyt Technol Biomed Life Sci. 2006 Feb 2;831(1-2):110-5. Epub 2005 Dec 27.

PMID:
16377264
33.

Perfluorinated chemicals in selected residents of the American continent.

Calafat AM, Needham LL, Kuklenyik Z, Reidy JA, Tully JS, Aguilar-Villalobos M, Naeher LP.

Chemosphere. 2006 Apr;63(3):490-6. Epub 2005 Oct 5.

PMID:
16213555
34.

Measurement of 18 perfluorinated organic acids and amides in human serum using on-line solid-phase extraction.

Kuklenyik Z, Needham LL, Calafat AM.

Anal Chem. 2005 Sep 15;77(18):6085-91.

PMID:
16159145
36.
37.

Urinary concentrations of bisphenol A and 4-nonylphenol in a human reference population.

Calafat AM, Kuklenyik Z, Reidy JA, Caudill SP, Ekong J, Needham LL.

Environ Health Perspect. 2005 Apr;113(4):391-5.

38.

Automated online and off-line solid-phase extraction methods for measuring isoflavones and lignans in urine.

Kuklenyik Z, Ye X, Reich JA, Needham LL, Calafat AM.

J Chromatogr Sci. 2004 Oct;42(9):495-500.

PMID:
15693191
39.

Automated solid-phase extraction and measurement of perfluorinated organic acids and amides in human serum and milk.

Kuklenyik Z, Reich JA, Tully JS, Needham LL, Calafat AM.

Environ Sci Technol. 2004 Jul 1;38(13):3698-704.

PMID:
15296323
40.
41.

Urinary levels of trichloroacetic acid, a disinfection by-product in chlorinated drinking water, in a human reference population.

Calafat AM, Kuklenyik Z, Caudill SP, Ashley DL.

Environ Health Perspect. 2003 Feb;111(2):151-4.

43.

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