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Items: 40

1.

Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions.

Rosenfeld CS, Hekman JP, Johnson JL, Lyu Z, Ortega MT, Joshi T, Mao J, Vladimirova AV, Gulevich RG, Kharlamova AV, Acland GM, Hecht EE, Wang X, Clark AG, Trut LN, Behura SK, Kukekova AV.

Genes Brain Behav. 2019 Oct 11. doi: 10.1111/gbb.12614. [Epub ahead of print]

PMID:
31605445
2.

The Red Fox Y-Chromosome in Comparative Context.

Rando HM, Wadlington WH, Johnson JL, Stutchman JT, Trut LN, Farré M, Kukekova AV.

Genes (Basel). 2019 May 28;10(6). pii: E409. doi: 10.3390/genes10060409.

3.

Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks.

Farré M, Kim J, Proskuryakova AA, Zhang Y, Kulemzina AI, Li Q, Zhou Y, Xiong Y, Johnson JL, Perelman PL, Johnson WE, Warren WC, Kukekova AV, Zhang G, O'Brien SJ, Ryder OA, Graphodatsky AS, Ma J, Lewin HA, Larkin DM.

Genome Res. 2019 Apr;29(4):576-589. doi: 10.1101/gr.239863.118. Epub 2019 Feb 13.

4.

Four structural variants associated with human-directed sociability in dogs are not found in tame red foxes (Vulpes vulpes).

Bastounes ER, Rando HM, Johnson JL, Trut LN, Sacks BN, Driscoll CA, vonHoldt B, Kukekova AV.

Anim Genet. 2019 Feb;50(1):116-118. doi: 10.1111/age.12755. Epub 2018 Dec 10. No abstract available.

PMID:
30537086
5.

Genomic responses to selection for tame/aggressive behaviors in the silver fox (Vulpes vulpes).

Wang X, Pipes L, Trut LN, Herbeck Y, Vladimirova AV, Gulevich RG, Kharlamova AV, Johnson JL, Acland GM, Kukekova AV, Clark AG.

Proc Natl Acad Sci U S A. 2018 Oct 9;115(41):10398-10403. doi: 10.1073/pnas.1800889115. Epub 2018 Sep 18.

6.

Author Correction: Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours.

Kukekova AV, Johnson JL, Xiang X, Feng S, Liu S, Rando HM, Kharlamova AV, Herbeck Y, Serdyukova NA, Xiong Z, Beklemischeva V, Koepfli KP, Gulevich RG, Vladimirova AV, Hekman JP, Perelman PL, Graphodatsky AS, O'Brien SJ, Wang X, Clark AG, Acland GM, Trut LN, Zhang G.

Nat Ecol Evol. 2018 Sep;2(9):1514. doi: 10.1038/s41559-018-0664-6.

PMID:
30104754
7.

Sequencing of Supernumerary Chromosomes of Red Fox and Raccoon Dog Confirms a Non-Random Gene Acquisition by B Chromosomes.

Makunin AI, Romanenko SA, Beklemisheva VR, Perelman PL, Druzhkova AS, Petrova KO, Prokopov DY, Chernyaeva EN, Johnson JL, Kukekova AV, Yang F, Ferguson-Smith MA, Graphodatsky AS, Trifonov VA.

Genes (Basel). 2018 Aug 10;9(8). pii: E405. doi: 10.3390/genes9080405.

8.

Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours.

Kukekova AV, Johnson JL, Xiang X, Feng S, Liu S, Rando HM, Kharlamova AV, Herbeck Y, Serdyukova NA, Xiong Z, Beklemischeva V, Koepfli KP, Gulevich RG, Vladimirova AV, Hekman JP, Perelman PL, Graphodatsky AS, O'Brien SJ, Wang X, Clark AG, Acland GM, Trut LN, Zhang G.

Nat Ecol Evol. 2018 Sep;2(9):1479-1491. doi: 10.1038/s41559-018-0611-6. Epub 2018 Aug 6. Erratum in: Nat Ecol Evol. 2018 Aug 13;:.

9.

Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly.

Rando HM, Farré M, Robson MP, Won NB, Johnson JL, Buch R, Bastounes ER, Xiang X, Feng S, Liu S, Xiong Z, Kim J, Zhang G, Trut LN, Larkin DM, Kukekova AV.

Genes (Basel). 2018 Jun 20;9(6). pii: E308. doi: 10.3390/genes9060308.

10.

Anterior Pituitary Transcriptome Suggests Differences in ACTH Release in Tame and Aggressive Foxes.

Hekman JP, Johnson JL, Edwards W, Vladimirova AV, Gulevich RG, Ford AL, Kharlamova AV, Herbeck Y, Acland GM, Raetzman LT, Trut LN, Kukekova AV.

G3 (Bethesda). 2018 Mar 2;8(3):859-873. doi: 10.1534/g3.117.300508.

11.

Development of a genotype-by-sequencing immunogenetic assay as exemplified by screening for variation in red fox with and without endemic rabies exposure.

Donaldson ME, Rico Y, Hueffer K, Rando HM, Kukekova AV, Kyle CJ.

Ecol Evol. 2017 Dec 2;8(1):572-583. doi: 10.1002/ece3.3583. eCollection 2018 Jan.

12.

X Chromosome Evolution in Cetartiodactyla.

Proskuryakova AA, Kulemzina AI, Perelman PL, Makunin AI, Larkin DM, Farré M, Kukekova AV, Lynn Johnson J, Lemskaya NA, Beklemisheva VR, Roelke-Parker ME, Bellizzi J, Ryder OA, O'Brien SJ, Graphodatsky AS.

Genes (Basel). 2017 Aug 31;8(9). pii: E216. doi: 10.3390/genes8090216.

13.

Y-Chromosome Markers for the Red Fox.

Rando HM, Stutchman JT, Bastounes ER, Johnson JL, Driscoll CA, Barr CS, Trut LN, Sacks BN, Kukekova AV.

J Hered. 2017 Sep 1;108(6):678-685. doi: 10.1093/jhered/esx066.

14.

Genetics of Interactive Behavior in Silver Foxes (Vulpes vulpes).

Nelson RM, Temnykh SV, Johnson JL, Kharlamova AV, Vladimirova AV, Gulevich RG, Shepeleva DV, Oskina IN, Acland GM, Rönnegård L, Trut LN, Carlborg Ö, Kukekova AV.

Behav Genet. 2017 Jan;47(1):88-101. doi: 10.1007/s10519-016-9815-1. Epub 2016 Oct 18.

PMID:
27757730
15.

Georgian white coat color of red fox (Vulpes vulpes) maps to fox chromosome 2 in the region containing KIT gene.

Kukekova AV, Johnson JL, Kharlamova AV, Vladimirova AV, Shepeleva DV, Gulevich RG, Trut LN.

Anim Genet. 2016 Aug;47(4):514-5. doi: 10.1111/age.12439. Epub 2016 Jun 22. No abstract available.

16.

Transcriptome Analysis in Domesticated Species: Challenges and Strategies.

Hekman JP, Johnson JL, Kukekova AV.

Bioinform Biol Insights. 2016 Feb 16;9(Suppl 4):21-31. doi: 10.4137/BBI.S29334. eCollection 2015. Review.

17.

Genotyping-By-Sequencing (GBS) Detects Genetic Structure and Confirms Behavioral QTL in Tame and Aggressive Foxes (Vulpes vulpes).

Johnson JL, Wittgenstein H, Mitchell SE, Hyma KE, Temnykh SV, Kharlamova AV, Gulevich RG, Vladimirova AV, Fong HW, Acland GM, Trut LN, Kukekova AV.

PLoS One. 2015 Jun 10;10(6):e0127013. doi: 10.1371/journal.pone.0127013. eCollection 2015.

18.

Platinum coat color in red fox (Vulpes vulpes) is caused by a mutation in an autosomal copy of KIT.

Johnson JL, Kozysa A, Kharlamova AV, Gulevich RG, Perelman PL, Fong HW, Vladimirova AV, Oskina IN, Trut LN, Kukekova AV.

Anim Genet. 2015 Apr;46(2):190-9. doi: 10.1111/age.12270. Epub 2015 Feb 6.

PMID:
25662789
19.

Genes on B chromosomes of vertebrates.

Makunin AI, Dementyeva PV, Graphodatsky AS, Volobouev VT, Kukekova AV, Trifonov VA.

Mol Cytogenet. 2014 Dec 17;7(1):99. doi: 10.1186/s13039-014-0099-y. eCollection 2014.

20.

Genomic deletion of CNGB3 is identical by descent in multiple canine breeds and causes achromatopsia.

Yeh CY, Goldstein O, Kukekova AV, Holley D, Knollinger AM, Huson HJ, Pearce-Kelling SE, Acland GM, Komáromy AM.

BMC Genet. 2013 Apr 20;14:27. doi: 10.1186/1471-2156-14-27.

21.

Genetics of behavior in the silver fox.

Kukekova AV, Temnykh SV, Johnson JL, Trut LN, Acland GM.

Mamm Genome. 2012 Feb;23(1-2):164-77. doi: 10.1007/s00335-011-9373-z. Epub 2011 Nov 23. Review.

PMID:
22108806
22.

Sequence comparison of prefrontal cortical brain transcriptome from a tame and an aggressive silver fox (Vulpes vulpes).

Kukekova AV, Johnson JL, Teiling C, Li L, Oskina IN, Kharlamova AV, Gulevich RG, Padte R, Dubreuil MM, Vladimirova AV, Shepeleva DV, Shikhevich SG, Sun Q, Ponnala L, Temnykh SV, Trut LN, Acland GM.

BMC Genomics. 2011 Oct 3;12:482. doi: 10.1186/1471-2164-12-482.

23.

On the origin of a domesticated species: Identifying the parent population of Russian silver foxes (Vulpes vulpes).

Statham MJ, Trut LN, Sacks BN, Kharlamova AV, Oskina IN, Gulevich RG, Johnson JL, Temnykh SV, Acland GM, Kukekova AV.

Biol J Linn Soc Lond. 2011 May;103(1):168-175.

24.

Mapping Loci for fox domestication: deconstruction/reconstruction of a behavioral phenotype.

Kukekova AV, Trut LN, Chase K, Kharlamova AV, Johnson JL, Temnykh SV, Oskina IN, Gulevich RG, Vladimirova AV, Klebanov S, Shepeleva DV, Shikhevich SG, Acland GM, Lark KG.

Behav Genet. 2011 Jul;41(4):593-606. doi: 10.1007/s10519-010-9418-1. Epub 2010 Dec 14.

25.

Exonic SINE insertion in STK38L causes canine early retinal degeneration (erd).

Goldstein O, Kukekova AV, Aguirre GD, Acland GM.

Genomics. 2010 Dec;96(6):362-8. doi: 10.1016/j.ygeno.2010.09.003. Epub 2010 Sep 29.

26.

Directional asymmetry in the limbs, skull and pelvis of the silver fox (V. vulpes).

Kharlamova AV, Trut LN, Chase K, Kukekova AV, Lark KG.

J Morphol. 2010 Dec;271(12):1501-8. doi: 10.1002/jmor.10890.

27.

Chromosomal mapping of canine-derived BAC clones to the red fox and American mink genomes.

Kukekova AV, Vorobieva NV, Beklemisheva VR, Johnson JL, Temnykh SV, Yudkin DV, Trut LN, Andre C, Galibert F, Aguirre GD, Acland GM, Graphodatsky AS.

J Hered. 2009 Jul-Aug;100 Suppl 1:S42-53. doi: 10.1093/jhered/esp037. Epub 2009 Jun 21.

28.

Canine RD3 mutation establishes rod-cone dysplasia type 2 (rcd2) as ortholog of human and murine rd3.

Kukekova AV, Goldstein O, Johnson JL, Richardson MA, Pearce-Kelling SE, Swaroop A, Friedman JS, Aguirre GD, Acland GM.

Mamm Genome. 2009 Feb;20(2):109-23. doi: 10.1007/s00335-008-9163-4. Epub 2009 Jan 9.

29.

Measurement of segregating behaviors in experimental silver fox pedigrees.

Kukekova AV, Trut LN, Chase K, Shepeleva DV, Vladimirova AV, Kharlamova AV, Oskina IN, Stepika A, Klebanov S, Erb HN, Acland GM.

Behav Genet. 2008 Mar;38(2):185-94. Epub 2007 Nov 21.

30.

Breed relationships facilitate fine-mapping studies: a 7.8-kb deletion cosegregates with Collie eye anomaly across multiple dog breeds.

Parker HG, Kukekova AV, Akey DT, Goldstein O, Kirkness EF, Baysac KC, Mosher DS, Aguirre GD, Acland GM, Ostrander EA.

Genome Res. 2007 Nov;17(11):1562-71. Epub 2007 Oct 4.

31.

A meiotic linkage map of the silver fox, aligned and compared to the canine genome.

Kukekova AV, Trut LN, Oskina IN, Johnson JL, Temnykh SV, Kharlamova AV, Shepeleva DV, Gulievich RG, Shikhevich SG, Graphodatsky AS, Aguirre GD, Acland GM.

Genome Res. 2007 Mar;17(3):387-99. Epub 2007 Feb 6.

32.

Mapping of KIT adjacent sequences on canid autosomes and B chromosomes.

Yudkin DV, Trifonov VA, Kukekova AV, Vorobieva NV, Rubtsova NV, Yang F, Acland GM, Ferguson-Smith MA, Graphodatsky AS.

Cytogenet Genome Res. 2007;116(1-2):100-3.

PMID:
17268185
33.

Linkage mapping of canine rod cone dysplasia type 2 (rcd2) to CFA7, the canine orthologue of human 1q32.

Kukekova AV, Nelson J, Kuchtey RW, Lowe JK, Johnson JL, Ostrander EA, Aguirre GD, Acland GM.

Invest Ophthalmol Vis Sci. 2006 Mar;47(3):1210-5.

PMID:
16505060
34.

The proto-oncogene C-KIT maps to canid B-chromosomes.

Graphodatsky AS, Kukekova AV, Yudkin DV, Trifonov VA, Vorobieva NV, Beklemisheva VR, Perelman PL, Graphodatskaya DA, Trut LN, Yang F, Ferguson-Smith MA, Acland GM, Aguirre GD.

Chromosome Res. 2005;13(2):113-22.

PMID:
15861301
35.

A marker set for construction of a genetic map of the silver fox (Vulpes vulpes).

Kukekova AV, Trut LN, Oskina IN, Kharlamova AV, Shikhevich SG, Kirkness EF, Aguirre GD, Acland GM.

J Hered. 2004 May-Jun;95(3):185-94.

PMID:
15220384
36.
37.

Linkage mapping of the primary disease locus for collie eye anomaly.

Lowe JK, Kukekova AV, Kirkness EF, Langlois MC, Aguirre GD, Acland GM, Ostrander EA.

Genomics. 2003 Jul;82(1):86-95.

PMID:
12809679
38.

[Cell division genes and proteins in bacterial cells].

Kukekova AV, Borkhenius SN.

Tsitologiia. 2000;42(6):519-29. Review. Russian.

PMID:
10953856
39.

Characterization of Acholeplasma laidlawii ftsZ gene and its gene product.

Kukekova AV, Malinin AY, Ayala JA, Borchsenius SN.

Biochem Biophys Res Commun. 1999 Aug 19;262(1):44-9.

PMID:
10448065
40.

[Cloning and expression of the gene for the mycoplasma key division protein FtsZ in Escherichia coli].

Kukekova AV, Malinin AIu, Vonskiĭ MA, Borkhsenius SN.

Genetika. 1999 Mar;35(2):314-21. Russian.

PMID:
10368784

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