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Items: 3

1.

SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups.

Jammali S, Aguilar JD, Kuitche E, Ouangraoua A.

BMC Bioinformatics. 2019 Mar 29;20(Suppl 3):133. doi: 10.1186/s12859-019-2647-2.

2.

Reconstructing protein and gene phylogenies using reconciliation and soft-clustering.

Kuitche E, Lafond M, Ouangraoua A.

J Bioinform Comput Biol. 2017 Dec;15(6):1740007. doi: 10.1142/S0219720017400078. Epub 2017 Oct 19.

PMID:
29169277
3.

Aligning coding sequences with frameshift extension penalties.

Jammali S, Kuitche E, Rachati A, BĂ©langer F, Scott M, Ouangraoua A.

Algorithms Mol Biol. 2017 Mar 31;12:10. doi: 10.1186/s13015-017-0101-4. eCollection 2017.

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