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Items: 17

1.

Gene expression trends and protein features effectively complement each other in gene function prediction.

Wabnik K, Hvidsten TR, Kedzierska A, Van Leene J, De Jaeger G, Beemster GT, Komorowski J, Kuiper MT.

Bioinformatics. 2009 Feb 1;25(3):322-30. doi: 10.1093/bioinformatics/btn625. Epub 2008 Dec 2.

PMID:
19050035
2.

CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes.

Sclep G, Allemeersch J, Liechti R, De Meyer B, Beynon J, Bhalerao R, Moreau Y, Nietfeld W, Renou JP, Reymond P, Kuiper MT, Hilson P.

BMC Bioinformatics. 2007 Oct 18;8:400.

3.

Benchmarking the CATMA microarray. A novel tool for Arabidopsis transcriptome analysis.

Allemeersch J, Durinck S, Vanderhaeghen R, Alard P, Maes R, Seeuws K, Bogaert T, Coddens K, Deschouwer K, Van Hummelen P, Vuylsteke M, Moreau Y, Kwekkeboom J, Wijfjes AH, May S, Beynon J, Hilson P, Kuiper MT.

Plant Physiol. 2005 Feb;137(2):588-601.

4.

Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.

Hilson P, Allemeersch J, Altmann T, Aubourg S, Avon A, Beynon J, Bhalerao RP, Bitton F, Caboche M, Cannoot B, Chardakov V, Cognet-Holliger C, Colot V, Crowe M, Darimont C, Durinck S, Eickhoff H, de Longevialle AF, Farmer EE, Grant M, Kuiper MT, Lehrach H, Léon C, Leyva A, Lundeberg J, Lurin C, Moreau Y, Nietfeld W, Paz-Ares J, Reymond P, Rouzé P, Sandberg G, Segura MD, Serizet C, Tabrett A, Taconnat L, Thareau V, Van Hummelen P, Vercruysse S, Vuylsteke M, Weingartner M, Weisbeek PJ, Wirta V, Wittink FR, Zabeau M, Small I.

Genome Res. 2004 Oct;14(10B):2176-89.

5.

European consortia building integrated resources for Arabidopsis functional genomics.

Hilson P, Small I, Kuiper MT.

Curr Opin Plant Biol. 2003 Oct;6(5):426-9. Review.

PMID:
12972042
6.

Phylogeny of bovine species based on AFLP fingerprinting.

Buntjer JB, Otsen M, Nijman IJ, Kuiper MT, Lenstra JA.

Heredity (Edinb). 2002 Jan;88(1):46-51.

7.

Mapping of a QTL for serum HDL cholesterol in the rabbit using AFLP technology.

Van Haeringen WA, Den Bieman M, Gillissen GF, Lankhorst AE, Kuiper MT, Van Zutphen LF, Van Lith HA.

J Hered. 2001 Jul-Aug;92(4):322-6.

PMID:
11535644
8.

Building a high-density genetic map using the AFLP technology.

Kuiper MT.

Methods Mol Biol. 1998;82:157-71. No abstract available.

PMID:
9664423
9.

Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population.

Alonso-Blanco C, Peeters AJ, Koornneef M, Lister C, Dean C, van den Bosch N, Pot J, Kuiper MT.

Plant J. 1998 Apr;14(2):259-71.

10.

Use of AFLP markers for gene mapping and QTL detection in the rat.

Otsen M, den Bieman M, Kuiper MT, Pravenec M, Kren V, Kurtz TW, Jacob HJ, Lankhorst A, van Zutphen BF.

Genomics. 1996 Nov 1;37(3):289-94.

PMID:
8938440
11.

The VS catalytic RNA replicates by reverse transcription as a satellite of a retroplasmid.

Kennell JC, Saville BJ, Mohr S, Kuiper MT, Sabourin JR, Collins RA, Lambowitz AM.

Genes Dev. 1995 Feb 1;9(3):294-303.

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A novel reverse transcriptase activity associated with mitochondrial plasmids of Neurospora.

Kuiper MT, Lambowitz AM.

Cell. 1988 Nov 18;55(4):693-704. Erratum in: Cell 1989 Jan 13;56(1):following 139.

PMID:
2460246
15.

A 3' splice site mutation in a nuclear gene encoding a mitochondrial ribosomal protein in Neurospora crassa.

Kuiper MT, Holtrop M, Vennema H, Lambowitz AM, de Vries H.

J Biol Chem. 1988 Feb 25;263(6):2848-52.

16.

Isolation and analysis of the Neurospora crassa Cyt-21 gene. A nuclear gene encoding a mitochondrial ribosomal protein.

Kuiper MT, Akins RA, Holtrop M, de Vries H, Lambowitz AM.

J Biol Chem. 1988 Feb 25;263(6):2840-7.

17.

Molecular cloning of pea mRNAs encoding a shoot-specific polypeptide and light-induced polypeptides.

De Vries SC, Harmsen MC, Kuiper MT, Dons HJ, Wessels JG.

Plant Mol Biol. 1983 Nov;2(6):295-303. doi: 10.1007/BF01578590.

PMID:
24318448

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