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Items: 1 to 50 of 78

1.

Gongronella sp. w5 elevates Coprinopsis cinerea laccase production by carbon source syntrophism and secondary metabolite induction.

Hu J, Zhang Y, Xu Y, Sun Q, Liu J, Fang W, Xiao Y, Kües U, Fang Z.

Appl Microbiol Biotechnol. 2019 Jan;103(1):411-425. doi: 10.1007/s00253-018-9469-4. Epub 2018 Nov 7.

PMID:
30406450
2.

Laccase production and pellet morphology of Coprinopsis cinerea transformants in liquid shake flask cultures.

Rühl M, Lange K, Kües U.

Appl Microbiol Biotechnol. 2018 Sep;102(18):7849-7863. doi: 10.1007/s00253-018-9227-7. Epub 2018 Jul 21.

PMID:
30032435
3.

Bulk isolation of basidiospores from wild mushrooms by electrostatic attraction with low risk of microbial contaminations.

Lakkireddy K, Kües U.

AMB Express. 2017 Dec;7(1):28. doi: 10.1186/s13568-017-0326-0. Epub 2017 Jan 25.

4.

Paradoxical performance of tryptophan synthase gene trp1 (+) in transformations of the basidiomycete Coprinopsis cinerea.

Dörnte B, Kües U.

Appl Microbiol Biotechnol. 2016 Oct;100(20):8789-807. doi: 10.1007/s00253-016-7693-3. Epub 2016 Jul 2.

PMID:
27368741
5.

Fungal enzymes for environmental management.

Kües U.

Curr Opin Biotechnol. 2015 Jun;33:268-78. doi: 10.1016/j.copbio.2015.03.006. Epub 2015 Apr 9. Review.

PMID:
25867110
6.

Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii.

Floudas D, Held BW, Riley R, Nagy LG, Koehler G, Ransdell AS, Younus H, Chow J, Chiniquy J, Lipzen A, Tritt A, Sun H, Haridas S, LaButti K, Ohm RA, Kües U, Blanchette RA, Grigoriev IV, Minto RE, Hibbett DS.

Fungal Genet Biol. 2015 Mar;76:78-92. doi: 10.1016/j.fgb.2015.02.002. Epub 2015 Feb 12.

7.

Genome analysis of medicinal Ganoderma spp. with plant-pathogenic and saprotrophic life-styles.

Kües U, Nelson DR, Liu C, Yu GJ, Zhang J, Li J, Wang XC, Sun H.

Phytochemistry. 2015 Jun;114:18-37. doi: 10.1016/j.phytochem.2014.11.019. Epub 2015 Feb 11. Review.

PMID:
25682509
8.

Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood.

Hori C, Ishida T, Igarashi K, Samejima M, Suzuki H, Master E, Ferreira P, Ruiz-Dueñas FJ, Held B, Canessa P, Larrondo LF, Schmoll M, Druzhinina IS, Kubicek CP, Gaskell JA, Kersten P, St John F, Glasner J, Sabat G, Splinter BonDurant S, Syed K, Yadav J, Mgbeahuruike AC, Kovalchuk A, Asiegbu FO, Lackner G, Hoffmeister D, Rencoret J, Gutiérrez A, Sun H, Lindquist E, Barry K, Riley R, Grigoriev IV, Henrissat B, Kües U, Berka RM, Martínez AT, Covert SF, Blanchette RA, Cullen D.

PLoS Genet. 2014 Dec 4;10(12):e1004759. doi: 10.1371/journal.pgen.1004759. eCollection 2014 Dec.

9.

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown.

Levasseur A, Lomascolo A, Chabrol O, Ruiz-Dueñas FJ, Boukhris-Uzan E, Piumi F, Kües U, Ram AF, Murat C, Haon M, Benoit I, Arfi Y, Chevret D, Drula E, Kwon MJ, Gouret P, Lesage-Meessen L, Lombard V, Mariette J, Noirot C, Park J, Patyshakuliyeva A, Sigoillot JC, Wiebenga A, Wösten HA, Martin F, Coutinho PM, de Vries RP, Martínez AT, Klopp C, Pontarotti P, Henrissat B, Record E.

BMC Genomics. 2014 Jun 18;15:486. doi: 10.1186/1471-2164-15-486.

10.

The genetic structure of the A mating-type locus of Lentinula edodes.

Au CH, Wong MC, Bao D, Zhang M, Song C, Song W, Law PT, Kües U, Kwan HS.

Gene. 2014 Feb 10;535(2):184-90. doi: 10.1016/j.gene.2013.11.036. Epub 2013 Dec 1.

PMID:
24295887
11.

A DNA damage checkpoint pathway coordinates the division of dikaryotic cells in the ink cap mushroom Coprinopsis cinerea.

de Sena-Tomás C, Navarro-González M, Kües U, Pérez-Martín J.

Genetics. 2013 Sep;195(1):47-57. doi: 10.1534/genetics.113.152231. Epub 2013 Jun 21.

12.

Lcc1 and Lcc5 are the main laccases secreted in liquid cultures of Coprinopsis cinerea strains.

Rühl M, Majcherczyk A, Kües U.

Antonie Van Leeuwenhoek. 2013 May;103(5):1029-39. doi: 10.1007/s10482-013-9883-7. Epub 2013 Jan 23.

13.

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche.

Morin E, Kohler A, Baker AR, Foulongne-Oriol M, Lombard V, Nagy LG, Ohm RA, Patyshakuliyeva A, Brun A, Aerts AL, Bailey AM, Billette C, Coutinho PM, Deakin G, Doddapaneni H, Floudas D, Grimwood J, Hildén K, Kües U, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Murat C, Riley RW, Salamov AA, Schmutz J, Subramanian V, Wösten HA, Xu J, Eastwood DC, Foster GD, Sonnenberg AS, Cullen D, de Vries RP, Lundell T, Hibbett DS, Henrissat B, Burton KS, Kerrigan RW, Challen MP, Grigoriev IV, Martin F.

Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17501-6. doi: 10.1073/pnas.1206847109. Epub 2012 Oct 8. Erratum in: Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4146.

14.

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.

Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Górecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kües U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Dueñas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS.

Science. 2012 Jun 29;336(6089):1715-9. doi: 10.1126/science.1221748.

15.

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen.

Olson A, Aerts A, Asiegbu F, Belbahri L, Bouzid O, Broberg A, Canbäck B, Coutinho PM, Cullen D, Dalman K, Deflorio G, van Diepen LT, Dunand C, Duplessis S, Durling M, Gonthier P, Grimwood J, Fossdal CG, Hansson D, Henrissat B, Hietala A, Himmelstrand K, Hoffmeister D, Högberg N, James TY, Karlsson M, Kohler A, Kües U, Lee YH, Lin YC, Lind M, Lindquist E, Lombard V, Lucas S, Lundén K, Morin E, Murat C, Park J, Raffaello T, Rouzé P, Salamov A, Schmutz J, Solheim H, Ståhlberg J, Vélëz H, de Vries RP, Wiebenga A, Woodward S, Yakovlev I, Garbelotto M, Martin F, Grigoriev IV, Stenlid J.

New Phytol. 2012 Jun;194(4):1001-13. doi: 10.1111/j.1469-8137.2012.04128.x. Epub 2012 Mar 28.

16.

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis.

Fernandez-Fueyo E, Ruiz-Dueñas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Watanabe T, Ryu JS, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter BonDurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavín JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kües U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D.

Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5458-63. doi: 10.1073/pnas.1119912109. Epub 2012 Mar 20. Erratum in: Proc Natl Acad Sci U S A. 2012 May 22;109(21):8352. San, Ryu Jae [corrected to Ryu, Jae San].

17.

Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana.

Floerl S, Majcherczyk A, Possienke M, Feussner K, Tappe H, Gatz C, Feussner I, Kües U, Polle A.

PLoS One. 2012;7(2):e31435. doi: 10.1371/journal.pone.0031435. Epub 2012 Feb 20.

18.

Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor.

Plett JM, Gibon J, Kohler A, Duffy K, Hoegger PJ, Velagapudi R, Han J, Kües U, Grigoriev IV, Martin F.

Fungal Genet Biol. 2012 Mar;49(3):199-209. doi: 10.1016/j.fgb.2012.01.002. Epub 2012 Jan 28.

PMID:
22293303
19.
20.

Multiple multi-copper oxidase gene families in basidiomycetes - what for?

Kües U, Rühl M.

Curr Genomics. 2011 Apr;12(2):72-94. doi: 10.2174/138920211795564377.

21.

The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi.

Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, LaButti K, Lapidus A, Lavin JL, Lee YH, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie X, Kües U, Hibbett DS, Hoffmeister D, Högberg N, Martin F, Grigoriev IV, Watkinson SC.

Science. 2011 Aug 5;333(6043):762-5. doi: 10.1126/science.1205411. Epub 2011 Jul 14. Erratum in: Science. 2011 Sep 30;333(6051):1825.

22.

Obligate biotrophy features unraveled by the genomic analysis of rust fungi.

Duplessis S, Cuomo CA, Lin YC, Aerts A, Tisserant E, Veneault-Fourrey C, Joly DL, Hacquard S, Amselem J, Cantarel BL, Chiu R, Coutinho PM, Feau N, Field M, Frey P, Gelhaye E, Goldberg J, Grabherr MG, Kodira CD, Kohler A, Kües U, Lindquist EA, Lucas SM, Mago R, Mauceli E, Morin E, Murat C, Pangilinan JL, Park R, Pearson M, Quesneville H, Rouhier N, Sakthikumar S, Salamov AA, Schmutz J, Selles B, Shapiro H, Tanguay P, Tuskan GA, Henrissat B, Van de Peer Y, Rouzé P, Ellis JG, Dodds PN, Schein JE, Zhong S, Hamelin RC, Grigoriev IV, Szabo LJ, Martin F.

Proc Natl Acad Sci U S A. 2011 May 31;108(22):9166-71. doi: 10.1073/pnas.1019315108. Epub 2011 May 2.

23.

On the road to understanding truffles in the underground.

Kües U, Martin F.

Fungal Genet Biol. 2011 Jun;48(6):555-60. doi: 10.1016/j.fgb.2011.02.002. Epub 2011 Feb 24.

PMID:
21354318
24.

Genome sequence of the model mushroom Schizophyllum commune.

Ohm RA, de Jong JF, Lugones LG, Aerts A, Kothe E, Stajich JE, de Vries RP, Record E, Levasseur A, Baker SE, Bartholomew KA, Coutinho PM, Erdmann S, Fowler TJ, Gathman AC, Lombard V, Henrissat B, Knabe N, Kües U, Lilly WW, Lindquist E, Lucas S, Magnuson JK, Piumi F, Raudaskoski M, Salamov A, Schmutz J, Schwarze FW, vanKuyk PA, Horton JS, Grigoriev IV, Wösten HA.

Nat Biotechnol. 2010 Sep;28(9):957-63. doi: 10.1038/nbt.1643. Epub 2010 Jul 11.

PMID:
20622885
25.

Mating-type orthologous genes in the primarily homothallic Moniliophthora perniciosa, the causal agent of Witches' Broom Disease in cacao.

Kües U, Navarro-González M.

J Basic Microbiol. 2010 Oct;50(5):442-51. doi: 10.1002/jobm.201000013.

PMID:
20586074
26.

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).

Stajich JE, Wilke SK, Ahrén D, Au CH, Birren BW, Borodovsky M, Burns C, Canbäck B, Casselton LA, Cheng CK, Deng J, Dietrich FS, Fargo DC, Farman ML, Gathman AC, Goldberg J, Guigó R, Hoegger PJ, Hooker JB, Huggins A, James TY, Kamada T, Kilaru S, Kodira C, Kües U, Kupfer D, Kwan HS, Lomsadze A, Li W, Lilly WW, Ma LJ, Mackey AJ, Manning G, Martin F, Muraguchi H, Natvig DO, Palmerini H, Ramesh MA, Rehmeyer CJ, Roe BA, Shenoy N, Stanke M, Ter-Hovhannisyan V, Tunlid A, Velagapudi R, Vision TJ, Zeng Q, Zolan ME, Pukkila PJ.

Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11889-94. doi: 10.1073/pnas.1003391107. Epub 2010 Jun 14.

27.

Optimized protocol for the 2-DE of extracellular proteins from higher basidiomycetes inhabiting lignocellulose.

Fragner D, Zomorrodi M, Kües U, Majcherczyk A.

Electrophoresis. 2009 Jul;30(14):2431-41. doi: 10.1002/elps.200800770.

PMID:
19593751
28.

Phylogenetic analysis, genomic organization, and expression analysis of multi-copper oxidases in the ectomycorrhizal basidiomycete Laccaria bicolor.

Courty PE, Hoegger PJ, Kilaru S, Kohler A, Buée M, Garbaye J, Martin F, Kües U.

New Phytol. 2009;182(3):736-50. doi: 10.1111/j.1469-8137.2009.02774.x. Epub 2009 Feb 24.

29.

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.

Martinez D, Challacombe J, Morgenstern I, Hibbett D, Schmoll M, Kubicek CP, Ferreira P, Ruiz-Duenas FJ, Martinez AT, Kersten P, Hammel KE, Vanden Wymelenberg A, Gaskell J, Lindquist E, Sabat G, Bondurant SS, Larrondo LF, Canessa P, Vicuna R, Yadav J, Doddapaneni H, Subramanian V, Pisabarro AG, Lavín JL, Oguiza JA, Master E, Henrissat B, Coutinho PM, Harris P, Magnuson JK, Baker SE, Bruno K, Kenealy W, Hoegger PJ, Kües U, Ramaiya P, Lucas S, Salamov A, Shapiro H, Tu H, Chee CL, Misra M, Xie G, Teter S, Yaver D, James T, Mokrejs M, Pospisek M, Grigoriev IV, Brettin T, Rokhsar D, Berka R, Cullen D.

Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1954-9. doi: 10.1073/pnas.0809575106. Epub 2009 Feb 4.

30.

Defence reactions in the apoplastic proteome of oilseed rape (Brassica napus var. napus) attenuate Verticillium longisporum growth but not disease symptoms.

Floerl S, Druebert C, Majcherczyk A, Karlovsky P, Kües U, Polle A.

BMC Plant Biol. 2008 Dec 18;8:129. doi: 10.1186/1471-2229-8-129.

31.

Gene organization of the mating type regions in the ectomycorrhizal fungus Laccaria bicolor reveals distinct evolution between the two mating type loci.

Niculita-Hirzel H, Labbé J, Kohler A, le Tacon F, Martin F, Sanders IR, Kües U.

New Phytol. 2008;180(2):329-42. doi: 10.1111/j.1469-8137.2008.02525.x. Epub 2008 Jun 12.

32.

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis.

Martin F, Aerts A, Ahrén D, Brun A, Danchin EG, Duchaussoy F, Gibon J, Kohler A, Lindquist E, Pereda V, Salamov A, Shapiro HJ, Wuyts J, Blaudez D, Buée M, Brokstein P, Canbäck B, Cohen D, Courty PE, Coutinho PM, Delaruelle C, Detter JC, Deveau A, DiFazio S, Duplessis S, Fraissinet-Tachet L, Lucic E, Frey-Klett P, Fourrey C, Feussner I, Gay G, Grimwood J, Hoegger PJ, Jain P, Kilaru S, Labbé J, Lin YC, Legué V, Le Tacon F, Marmeisse R, Melayah D, Montanini B, Muratet M, Nehls U, Niculita-Hirzel H, Oudot-Le Secq MP, Peter M, Quesneville H, Rajashekar B, Reich M, Rouhier N, Schmutz J, Yin T, Chalot M, Henrissat B, Kües U, Lucas S, Van de Peer Y, Podila GK, Polle A, Pukkila PJ, Richardson PM, Rouzé P, Sanders IR, Stajich JE, Tunlid A, Tuskan G, Grigoriev IV.

Nature. 2008 Mar 6;452(7183):88-92. doi: 10.1038/nature06556.

PMID:
18322534
33.

Early drought-induced changes to the needle proteome of Norway spruce.

Blödner C, Majcherczyk A, Kües U, Polle A.

Tree Physiol. 2007 Oct;27(10):1423-31.

PMID:
17669733
34.

Implication of mycelium-associated laccase from Irpex lacteus in the decolorization of synthetic dyes.

Svobodová K, Majcherczyk A, Novotný C, Kües U.

Bioresour Technol. 2008 Feb;99(3):463-71. Epub 2007 Mar 21.

PMID:
17369037
35.

Green fluorescent protein expression in the symbiotic basidiomycete fungus Hebeloma cylindrosporum.

Rekangalt D, Verner MC, Kües U, Walser PJ, Marmeisse R, Debaud JC, Fraissinet-Tachet L.

FEMS Microbiol Lett. 2007 Mar;268(1):67-72.

36.

The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies.

Kilaru S, Hoegger PJ, Kües U.

Curr Genet. 2006 Jul;50(1):45-60. Epub 2006 Apr 28.

PMID:
16775746
37.

Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences.

Hoegger PJ, Kilaru S, James TY, Thacker JR, Kües U.

FEBS J. 2006 May;273(10):2308-26.

39.
40.

Expression of laccase gene lcc1 in Coprinopsis cinerea under control of various basidiomycetous promoters.

Kilaru S, Hoegger PJ, Majcherczyk A, Burns C, Shishido K, Bailey A, Foster GD, Kües U.

Appl Microbiol Biotechnol. 2006 Jun;71(2):200-10. Epub 2005 Sep 13.

PMID:
16158283
41.

Fourier transform infrared microscopy and imaging: detection of fungi in wood.

Naumann A, Navarro-González M, Peddireddi S, Kües U, Polle A.

Fungal Genet Biol. 2005 Oct;42(10):829-35.

PMID:
16098775
42.

Ligand interactions of the Coprinopsis cinerea galectins.

Walser PJ, Kües U, Aebi M, Künzler M.

Fungal Genet Biol. 2005 Apr;42(4):293-305. Epub 2005 Jan 28.

PMID:
15749049
43.
44.

Role of peg formation in clamp cell fusion of homobasidiomycete fungi.

Badalyan SM, Polak E, Hermann R, Aebi M, Kües U.

J Basic Microbiol. 2004;44(3):167-77.

PMID:
15162390
45.

Structure and functional analysis of the fungal galectin CGL2.

Walser PJ, Haebel PW, Künzler M, Sargent D, Kües U, Aebi M, Ban N.

Structure. 2004 Apr;12(4):689-702.

46.
47.

The laccase gene family in Coprinopsis cinerea (Coprinus cinereus).

Hoegger PJ, Navarro-González M, Kilaru S, Hoffmann M, Westbrook ED, Kües U.

Curr Genet. 2004 Feb;45(1):9-18. Epub 2003 Nov 5.

PMID:
14600788
48.

Biotechnology in the wood industry.

Mai C, Kües U, Militz H.

Appl Microbiol Biotechnol. 2004 Feb;63(5):477-94. Epub 2003 Aug 21. Review.

PMID:
12937955
49.

White-cap mutants and meiotic apoptosis in the basidiomycete Coprinus cinereus.

Lu BC, Gallo N, Kües U.

Fungal Genet Biol. 2003 Jun;39(1):82-93.

PMID:
12742066
50.

Influence of activated A and B mating-type pathways on developmental processes in the basidiomycete Coprinus cinereus.

Kües U, Walser PJ, Klaus MJ, Aebi M.

Mol Genet Genomics. 2002 Oct;268(2):262-71. Epub 2002 Sep 7.

PMID:
12395201

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