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Items: 1 to 50 of 184

1.

Uncovering the Genomic Landscape in Newly Diagnosed and Relapsed Pediatric Cytogenetically Normal FLT3-ITD AML.

Buelow DR, Pounds SB, Wang YD, Shi L, Li Y, Finkelstein D, Shurtleff S, Neale G, Inaba H, Ribeiro RC, Palumbo R, Garrison D, Orwick SJ, Blachly JS, Kroll K, Byrd JC, Gruber TA, Rubnitz JE, Baker SD.

Clin Transl Sci. 2019 Jul 26. doi: 10.1111/cts.12669. [Epub ahead of print]

PMID:
31350825
2.

A translational rheostat integrates euchromatin regulation and growth of pluripotent embryonic cells.

Meganathan K, Prakasam R, Kroll KL.

Stem Cell Investig. 2019 May 21;6:11. doi: 10.21037/sci.2019.05.01. eCollection 2019. No abstract available.

3.

Flow-enhanced vascularization and maturation of kidney organoids in vitro.

Homan KA, Gupta N, Kroll KT, Kolesky DB, Skylar-Scott M, Miyoshi T, Mau D, Valerius MT, Ferrante T, Bonventre JV, Lewis JA, Morizane R.

Nat Methods. 2019 Mar;16(3):255-262. doi: 10.1038/s41592-019-0325-y. Epub 2019 Feb 11.

4.

Blood Transcriptomics Analysis of Fish Exposed to Perfluoro Alkyls Substances: Assessment of a Non-Lethal Sampling Technique for Advancing Aquatic Toxicology Research.

Rodríguez-Jorquera IA, Colli-Dula RC, Kroll K, Jayasinghe BS, Parachu Marco MV, Silva-Sanchez C, Toor GS, Denslow ND.

Environ Sci Technol. 2019 Feb 5;53(3):1441-1452. doi: 10.1021/acs.est.8b03603. Epub 2019 Jan 11.

PMID:
30572700
5.

CMV Primes Functional Alternative Signaling in Adaptive Δg NK Cells but Is Subverted by Lentivirus Infection in Rhesus Macaques.

Shah SV, Manickam C, Ram DR, Kroll K, Itell H, Permar SR, Barouch DH, Klatt NR, Reeves RK.

Cell Rep. 2018 Dec 4;25(10):2766-2774.e3. doi: 10.1016/j.celrep.2018.11.020.

6.

Non-linear multidimensional flow cytometry analyses delineate NK cell phenotypes in normal and HIV-infected chimpanzees.

Manickam C, Li H, Shah SV, Kroll K, Reeves RK.

Int Immunol. 2019 Mar 5;31(3):175-180. doi: 10.1093/intimm/dxy076.

PMID:
30418531
7.

Indirect activation of rhesus macaque (Macaca mulatta) NK cells in oral and mucosal draining lymph nodes.

Ram DR, Kroll K, Reeves RK.

J Med Primatol. 2018 Oct;47(5):302-304. doi: 10.1111/jmp.12371. Epub 2018 Sep 6.

8.

Acoustophoretic printing.

Foresti D, Kroll KT, Amissah R, Sillani F, Homan KA, Poulikakos D, Lewis JA.

Sci Adv. 2018 Aug 31;4(8):eaat1659. doi: 10.1126/sciadv.aat1659. eCollection 2018 Aug.

9.

Comparative toxicity of three phenolic compounds on the embryo of fathead minnow, Pimephales promelas.

Li E, Bolser DG, Kroll KJ, Brockmeier EK, Falciani F, Denslow ND.

Aquat Toxicol. 2018 Aug;201:66-72. doi: 10.1016/j.aquatox.2018.05.024. Epub 2018 May 29.

PMID:
29879596
10.

In Silico Computational Transcriptomics Reveals Novel Endocrine Disruptors in Largemouth Bass ( Micropterus salmoides).

Basili D, Zhang JL, Herbert J, Kroll K, Denslow ND, Martyniuk CJ, Falciani F, Antczak P.

Environ Sci Technol. 2018 Jul 3;52(13):7553-7565. doi: 10.1021/acs.est.8b02805. Epub 2018 Jun 15.

11.

Progressive lentivirus infection induces natural killer cell receptor-expressing B cells in the gastrointestinal tract.

Manickam C, Nwanze C, Ram DR, Shah SV, Smith S, Jones R, Hueber B, Kroll K, Varner V, Goepfert P, Jost S, Reeves RK.

AIDS. 2018 Jul 31;32(12):1571-1578. doi: 10.1097/QAD.0000000000001855.

12.

Toward an adverse outcome pathway for impaired growth: Mitochondrial dysfunction impairs growth in early life stages of the fathead minnow (Pimephales promelas).

Bolser DG, Dreier DA, Li E, Kroll KJ, Martyniuk CJ, Denslow ND.

Comp Biochem Physiol C Toxicol Pharmacol. 2018 Jul;209:46-53. doi: 10.1016/j.cbpc.2018.03.009. Epub 2018 Apr 3.

PMID:
29625345
13.

Activated carbon as a means of limiting bioaccumulation of organochlorine pesticides, triclosan, triclocarban, and fipronil from sediments rich in organic matter.

Dang VD, Kroll KJ, Supowit SD, Halden RU, Denslow ND.

Chemosphere. 2018 Apr;197:627-633. doi: 10.1016/j.chemosphere.2018.01.062. Epub 2018 Jan 16.

14.

Development and disease in a dish: the epigenetics of neurodevelopmental disorders.

Lewis EM, Kroll KL.

Epigenomics. 2018 Feb;10(2):219-231. doi: 10.2217/epi-2017-0113. Epub 2018 Jan 15. Review.

15.

Geminin deficiency enhances survival in a murine medulloblastoma model by inducing apoptosis of preneoplastic granule neuron precursors.

Sankar S, Patterson E, Lewis EM, Waller LE, Tong C, Dearborn J, Wozniak D, Rubin JB, Kroll KL.

Genes Cancer. 2017 Sep;8(9-10):725-744. doi: 10.18632/genesandcancer.157.

16.

Regulatory networks specifying cortical interneurons from human embryonic stem cells reveal roles for CHD2 in interneuron development.

Meganathan K, Lewis EMA, Gontarz P, Liu S, Stanley EG, Elefanty AG, Huettner JE, Zhang B, Kroll KL.

Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):E11180-E11189. doi: 10.1073/pnas.1712365115. Epub 2017 Dec 11.

17.

FMNH2-dependent monooxygenases initiate catabolism of sulfonamides in Microbacterium sp. strain BR1 subsisting on sulfonamide antibiotics.

Ricken B, Kolvenbach BA, Bergesch C, Benndorf D, Kroll K, Strnad H, Vlček Č, Adaixo R, Hammes F, Shahgaldian P, Schäffer A, Kohler HE, Corvini PF.

Sci Rep. 2017 Nov 17;7(1):15783. doi: 10.1038/s41598-017-16132-8.

18.

Linking in vitro estrogenicity to adverse effects in the inland silverside (Menidia beryllina).

Mehinto AC, Kroll KJ, Jayasinghe BS, Lavelle CM, VanDervort D, Adeyemo OK, Bay SM, Maruya KA, Denslow ND.

Environ Toxicol Chem. 2018 Mar;37(3):884-892. doi: 10.1002/etc.4024. Epub 2018 Jan 16.

PMID:
29091346
19.

Evolution of allosteric regulation in chorismate mutases from early plants.

Kroll K, Holland CK, Starks CM, Jez JM.

Biochem J. 2017 Nov 1;474(22):3705-3717. doi: 10.1042/BCJ20170549.

PMID:
28963347
20.

Expression and purification of the extracellular domains of human glycoprotein VI (GPVI) and the receptor for advanced glycation end products (RAGE) from Rattus norvegicus in Leishmania tarentolae.

Langer T, Corvey C, Kroll K, Boscheinen O, Wendrich T, Dittrich W.

Prep Biochem Biotechnol. 2017 Nov 26;47(10):1008-1015. doi: 10.1080/10826068.2017.1365252. Epub 2017 Aug 31.

PMID:
28857681
21.

Development of tailored indigenous marine consortia for the degradation of naturally weathered polyethylene films.

Syranidou E, Karkanorachaki K, Amorotti F, Repouskou E, Kroll K, Kolvenbach B, Corvini PF, Fava F, Kalogerakis N.

PLoS One. 2017 Aug 25;12(8):e0183984. doi: 10.1371/journal.pone.0183984. eCollection 2017.

22.

Complete Genome Sequence of Achromobacter denitrificans PR1.

Reis AC, Kroll K, Gomila M, Kolvenbach BA, Corvini PFX, Nunes OC.

Genome Announc. 2017 Aug 3;5(31). pii: e00762-17. doi: 10.1128/genomeA.00762-17.

23.

Estrogen signaling through both membrane and nuclear receptors in the liver of fathead minnow.

Garcia-Reyero N, Jayasinghe BS, Kroll KJ, Sabo-Attwood T, Denslow ND.

Gen Comp Endocrinol. 2018 Feb 1;257:50-66. doi: 10.1016/j.ygcen.2017.07.019. Epub 2017 Jul 18.

PMID:
28733229
24.

Electro-mechanical conditioning of human iPSC-derived cardiomyocytes for translational research.

Kroll K, Chabria M, Wang K, Häusermann F, Schuler F, Polonchuk L.

Prog Biophys Mol Biol. 2017 Nov;130(Pt B):212-222. doi: 10.1016/j.pbiomolbio.2017.07.003. Epub 2017 Jul 6.

PMID:
28688751
25.

Uncovering the transcriptomic and epigenomic landscape of nicotinic receptor genes in non-neuronal tissues.

Zhang B, Madden P, Gu J, Xing X, Sankar S, Flynn J, Kroll K, Wang T.

BMC Genomics. 2017 Jun 5;18(1):439. doi: 10.1186/s12864-017-3813-4.

26.

Finding the culprit: who is turning hearts to stone?

Kroll KT, Zhou Q, Kohl P.

Stem Cell Investig. 2017 Apr 21;4:33. doi: 10.21037/sci.2017.03.02. eCollection 2017. No abstract available.

27.

The mutational oncoprint of recurrent cytogenetic abnormalities in adult patients with de novo acute myeloid leukemia.

Eisfeld AK, Mrózek K, Kohlschmidt J, Nicolet D, Orwick S, Walker CJ, Kroll KW, Blachly JS, Carroll AJ, Kolitz JE, Powell BL, Wang ES, Stone RM, de la Chapelle A, Byrd JC, Bloomfield CD.

Leukemia. 2017 Oct;31(10):2211-2218. doi: 10.1038/leu.2017.86. Epub 2017 Mar 24.

28.

How consistent are we? Interlaboratory comparison study in fathead minnows using the model estrogen 17α-ethinylestradiol to develop recommendations for environmental transcriptomics.

Feswick A, Isaacs M, Biales A, Flick RW, Bencic DC, Wang RL, Vulpe C, Brown-Augustine M, Loguinov A, Falciani F, Antczak P, Herbert J, Brown L, Denslow ND, Kroll KJ, Lavelle C, Dang V, Escalon L, Garcia-Reyero N, Martyniuk CJ, Munkittrick KR.

Environ Toxicol Chem. 2017 Oct;36(10):2614-2623. doi: 10.1002/etc.3799. Epub 2017 Apr 19.

29.

Gene regulatory networks in neural cell fate acquisition from genome-wide chromatin association of Geminin and Zic1.

Sankar S, Yellajoshyula D, Zhang B, Teets B, Rockweiler N, Kroll KL.

Sci Rep. 2016 Nov 24;6:37412. doi: 10.1038/srep37412.

30.

Mutations in the CCND1 and CCND2 genes are frequent events in adult patients with t(8;21)(q22;q22) acute myeloid leukemia.

Eisfeld AK, Kohlschmidt J, Schwind S, Nicolet D, Blachly JS, Orwick S, Shah C, Bainazar M, Kroll KW, Walker CJ, Carroll AJ, Powell BL, Stone RM, Kolitz JE, Baer MR, de la Chapelle A, Mrózek K, Byrd JC, Bloomfield CD.

Leukemia. 2017 Jun;31(6):1278-1285. doi: 10.1038/leu.2016.332. Epub 2016 Nov 15.

31.

Complete Transcriptome RNA-Seq.

Miller DF, Yan P, Fang F, Buechlein A, Kroll K, Frankhouser D, Stump C, Stump P, Ford JB, Tang H, Michaels S, Matei D, Huang TH, Chien J, Liu Y, Rusch DB, Nephew KP.

Methods Mol Biol. 2017;1513:141-162.

PMID:
27807835
32.

Adult acute myeloid leukemia with trisomy 11 as the sole abnormality is characterized by the presence of five distinct gene mutations: MLL-PTD, DNMT3A, U2AF1, FLT3-ITD and IDH2.

Eisfeld AK, Kohlschmidt J, Mrózek K, Blachly JS, Nicolet D, Kroll K, Orwick S, Carroll AJ, Stone RM, de la Chapelle A, Byrd JC, Bloomfield CD.

Leukemia. 2016 Nov;30(11):2254-2258. doi: 10.1038/leu.2016.196. Epub 2016 Jul 20. No abstract available.

33.

Mutational Landscape and Gene Expression Patterns in Adult Acute Myeloid Leukemias with Monosomy 7 as a Sole Abnormality.

Eisfeld AK, Kohlschmidt J, Mrózek K, Volinia S, Blachly JS, Nicolet D, Oakes C, Kroll K, Orwick S, Carroll AJ, Stone RM, Byrd JC, de la Chapelle A, Bloomfield CD.

Cancer Res. 2017 Jan 1;77(1):207-218. doi: 10.1158/0008-5472.CAN-16-1386. Epub 2016 Oct 26.

34.

High contaminant loads in Lake Apopka's riparian wetland disrupt gene networks involved in reproduction and immune function in largemouth bass.

Martyniuk CJ, Doperalski NJ, Prucha MS, Zhang JL, Kroll KJ, Conrow R, Barber DS, Denslow ND.

Comp Biochem Physiol Part D Genomics Proteomics. 2016 Sep;19:140-150. doi: 10.1016/j.cbd.2016.06.003. Epub 2016 Jun 20.

PMID:
27397556
35.

Tissue distribution of organochlorine pesticides in largemouth bass (Micropterus salmoides) from laboratory exposure and a contaminated lake.

Dang VD, Kroll KJ, Supowit SD, Halden RU, Denslow ND.

Environ Pollut. 2016 Sep;216:877-883. doi: 10.1016/j.envpol.2016.06.061. Epub 2016 Jul 6.

36.

Transcriptional networks associated with the immune system are disrupted by organochlorine pesticides in largemouth bass (Micropterus salmoides) ovary.

Martyniuk CJ, Doperalski NJ, Feswick A, Prucha MS, Kroll KJ, Barber DS, Denslow ND.

Aquat Toxicol. 2016 Aug;177:405-16. doi: 10.1016/j.aquatox.2016.06.009. Epub 2016 Jun 17.

PMID:
27391359
37.

MonoSeq Variant Caller Reveals Novel Mononucleotide Run Indel Mutations in Tumors with Defective DNA Mismatch Repair.

Walker CJ, Miranda MA, O'Hern MJ, Blachly JS, Moyer CL, Ivanovich J, Kroll KW, Eisfeld AK, Sapp CE, Mutch DG, Cohn DE, Bundschuh R, Goodfellow PJ.

Hum Mutat. 2016 Oct;37(10):1004-12. doi: 10.1002/humu.23036. Epub 2016 Aug 8.

38.

Complexities of X chromosome inactivation status in female human induced pluripotent stem cells-a brief review and scientific update for autism research.

Dandulakis MG, Meganathan K, Kroll KL, Bonni A, Constantino JN.

J Neurodev Disord. 2016 Jun 9;8:22. doi: 10.1186/s11689-016-9155-8. eCollection 2016. Review.

39.

The hypoxia-induced dehydrogenase HorA is required for coenzyme Q10 biosynthesis, azole sensitivity and virulence of Aspergillus fumigatus.

Kroll K, Shekhova E, Mattern DJ, Thywissen A, Jacobsen ID, Strassburger M, Heinekamp T, Shelest E, Brakhage AA, Kniemeyer O.

Mol Microbiol. 2016 Jul;101(1):92-108. doi: 10.1111/mmi.13377. Epub 2016 May 3.

40.

Active Sampling Device for Determining Pollutants in Surface and Pore Water - the In Situ Sampler for Biphasic Water Monitoring.

Supowit SD, Roll IB, Dang VD, Kroll KJ, Denslow ND, Halden RU.

Sci Rep. 2016 Feb 24;6:21886. doi: 10.1038/srep21886.

41.

Bioaccumulation of Legacy and Emerging Organochlorine Contaminants in Lumbriculus variegatus.

Dang VD, Kroll KJ, Supowit SD, Halden RU, Denslow ND.

Arch Environ Contam Toxicol. 2016 Jul;71(1):60-9. doi: 10.1007/s00244-016-0264-x. Epub 2016 Feb 1.

PMID:
26833202
42.

MuCor: mutation aggregation and correlation.

Kroll KW, Eisfeld AK, Lozanski G, Bloomfield CD, Byrd JC, Blachly JS.

Bioinformatics. 2016 May 15;32(10):1557-8. doi: 10.1093/bioinformatics/btw028. Epub 2016 Jan 23.

43.

Design Study of an Atmospheric Pressure Photoionization Interface for GC-MS.

Kersten H, Kroll K, Haberer K, Brockmann KJ, Benter T, Peterson A, Makarov A.

J Am Soc Mass Spectrom. 2016 Apr;27(4):607-14. doi: 10.1007/s13361-015-1320-x. Epub 2016 Jan 4.

PMID:
26729450
44.

Nucleophilic Aromatic Substitution Between Halogenated Benzene Dopants and Nucleophiles in Atmospheric Pressure Photoionization.

Kauppila TJ, Haack A, Kroll K, Kersten H, Benter T.

J Am Soc Mass Spectrom. 2016 Mar;27(3):422-31. doi: 10.1007/s13361-015-1315-7. Epub 2015 Dec 4.

PMID:
26637323
45.

Fractal regional myocardial blood flows pattern according to metabolism, not vascular anatomy.

Yipintsoi T, Kroll K, Bassingthwaighte JB.

Am J Physiol Heart Circ Physiol. 2016 Feb 1;310(3):H351-64. doi: 10.1152/ajpheart.00632.2015. Epub 2015 Nov 20.

46.

Developmental abnormalities and differential expression of genes induced in oil and dispersant exposed Menidia beryllina embryos.

Adeyemo OK, Kroll KJ, Denslow ND.

Aquat Toxicol. 2015 Nov;168:60-71. doi: 10.1016/j.aquatox.2015.09.012. Epub 2015 Sep 26.

PMID:
26448268
47.

Potential estrogenic effects of wastewaters on gene expression in Pimephales promelas and fish assemblages in streams of southeastern New York.

Baldigo BP, George SD, Phillips PJ, Hemming JD, Denslow ND, Kroll KJ.

Environ Toxicol Chem. 2015 Dec;34(12):2803-15. doi: 10.1002/etc.3120. Epub 2015 Oct 29.

PMID:
26423596
48.

[Panniculitis of the thigh and lung emphysema in a 54-year-old patient].

Eckhard M, Kröll KP, Karrasch T, Roller F, Feek U, Lange U, Noethe M, Seeger W, Ghofrani S, Schäffler A.

Internist (Berl). 2015 Jun;56(6):696, 698-701. doi: 10.1007/s00108-015-3710-3. German.

PMID:
25956612
49.

Transcriptional and physiological response of fathead minnows (Pimephales promelas) exposed to urban waters entering into wildlife protected areas.

Rodriguez-Jorquera IA, Kroll KJ, Toor GS, Denslow ND.

Environ Pollut. 2015 Apr;199:155-65. doi: 10.1016/j.envpol.2015.01.021. Epub 2015 Feb 3.

PMID:
25656232
50.

Quality Control for RNA-Seq (QuaCRS): An Integrated Quality Control Pipeline.

Kroll KW, Mokaram NE, Pelletier AR, Frankhouser DE, Westphal MS, Stump PA, Stump CL, Bundschuh R, Blachly JS, Yan P.

Cancer Inform. 2014 Oct 15;13(Suppl 3):7-14. doi: 10.4137/CIN.S14022. eCollection 2014.

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