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Items: 1 to 50 of 67

1.

Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis.

Sheflin AM, Chiniquy D, Yuan C, Goren E, Kumar I, Braud M, Brutnell T, Eveland AL, Tringe S, Liu P, Kresovich S, Marsh EL, Schachtman DP, Prenni JE.

Plant Direct. 2019 Mar 14;3(3):e00122. doi: 10.1002/pld3.122. eCollection 2019 Mar.

2.

A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism.

Cooper EA, Brenton ZW, Flinn BS, Jenkins J, Shu S, Flowers D, Luo F, Wang Y, Xia P, Barry K, Daum C, Lipzen A, Yoshinaga Y, Schmutz J, Saski C, Vermerris W, Kresovich S.

BMC Genomics. 2019 May 27;20(1):420. doi: 10.1186/s12864-019-5734-x.

3.

Genetic and genomic resources of sorghum to connect genotype with phenotype in contrasting environments.

Boyles RE, Brenton ZW, Kresovich S.

Plant J. 2019 Jan;97(1):19-39. doi: 10.1111/tpj.14113. Epub 2018 Dec 29.

PMID:
30260043
4.

Genetic architecture of kernel composition in global sorghum germplasm.

Rhodes DH, Hoffmann L Jr, Rooney WL, Herald TJ, Bean S, Boyles R, Brenton ZW, Kresovich S.

BMC Genomics. 2017 Jan 5;18(1):15. doi: 10.1186/s12864-016-3403-x.

5.

Genetic dissection of sorghum grain quality traits using diverse and segregating populations.

Boyles RE, Pfeiffer BK, Cooper EA, Rauh BL, Zielinski KJ, Myers MT, Brenton Z, Rooney WL, Kresovich S.

Theor Appl Genet. 2017 Apr;130(4):697-716. doi: 10.1007/s00122-016-2844-6. Epub 2016 Dec 27.

6.

Genome-Wide Association Studies of Grain Yield Components in Diverse Sorghum Germplasm.

Boyles RE, Cooper EA, Myers MT, Brenton Z, Rauh BL, Morris GP, Kresovich S.

Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.09.0091.

7.

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy.

Brenton ZW, Cooper EA, Myers MT, Boyles RE, Shakoor N, Zielinski KJ, Rauh BL, Bridges WC, Morris GP, Kresovich S.

Genetics. 2016 Sep;204(1):21-33. doi: 10.1534/genetics.115.183947. Epub 2016 Jun 29.

8.

Integration of Experiments across Diverse Environments Identifies the Genetic Determinants of Variation in Sorghum bicolor Seed Element Composition.

Shakoor N, Ziegler G, Dilkes BP, Brenton Z, Boyles R, Connolly EL, Kresovich S, Baxter I.

Plant Physiol. 2016 Apr;170(4):1989-98. doi: 10.1104/pp.15.01971. Epub 2016 Feb 19.

9.

The Association of Neighborhood Gene-Environment Susceptibility with Cortisol and Blood Pressure in African-American Adults.

Coulon SM, Wilson DK, Van Horn ML, Hand GA, Kresovich S.

Ann Behav Med. 2016 Feb;50(1):98-107. doi: 10.1007/s12160-015-9737-9.

10.

Genome-environment associations in sorghum landraces predict adaptive traits.

Lasky JR, Upadhyaya HD, Ramu P, Deshpande S, Hash CT, Bonnette J, Juenger TE, Hyma K, Acharya C, Mitchell SE, Buckler ES, Brenton Z, Kresovich S, Morris GP.

Sci Adv. 2015 Jul 3;1(6):e1400218. doi: 10.1126/sciadv.1400218. eCollection 2015 Jul.

11.

Genome-wide association study of grain polyphenol concentrations in global sorghum [Sorghum bicolor (L.) Moench] germplasm.

Rhodes DH, Hoffmann L Jr, Rooney WL, Ramu P, Morris GP, Kresovich S.

J Agric Food Chem. 2014 Nov 12;62(45):10916-27. doi: 10.1021/jf503651t. Epub 2014 Oct 28.

PMID:
25272193
12.

A Sorghum bicolor expression atlas reveals dynamic genotype-specific expression profiles for vegetative tissues of grain, sweet and bioenergy sorghums.

Shakoor N, Nair R, Crasta O, Morris G, Feltus A, Kresovich S.

BMC Plant Biol. 2014 Jan 23;14:35. doi: 10.1186/1471-2229-14-35.

13.

Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits.

Morris GP, Rhodes DH, Brenton Z, Ramu P, Thayil VM, Deshpande S, Hash CT, Acharya C, Mitchell SE, Buckler ES, Yu J, Kresovich S.

G3 (Bethesda). 2013 Nov 6;3(11):2085-94. doi: 10.1534/g3.113.008417.

14.

Population genomic and genome-wide association studies of agroclimatic traits in sorghum.

Morris GP, Ramu P, Deshpande SP, Hash CT, Shah T, Upadhyaya HD, Riera-Lizarazu O, Brown PJ, Acharya CB, Mitchell SE, Harriman J, Glaubitz JC, Buckler ES, Kresovich S.

Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):453-8. doi: 10.1073/pnas.1215985110. Epub 2012 Dec 24.

15.

The relationship between population structure and aluminum tolerance in cultivated sorghum.

Caniato FF, Guimarães CT, Hamblin M, Billot C, Rami JF, Hufnagel B, Kochian LV, Liu J, Garcia AA, Hash CT, Ramu P, Mitchell S, Kresovich S, Oliveira AC, de Avellar G, Borém A, Glaszmann JC, Schaffert RE, Magalhaes JV.

PLoS One. 2011;6(6):e20830. doi: 10.1371/journal.pone.0020830. Epub 2011 Jun 14.

16.

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population.

Kump KL, Bradbury PJ, Wisser RJ, Buckler ES, Belcher AR, Oropeza-Rosas MA, Zwonitzer JC, Kresovich S, McMullen MD, Ware D, Balint-Kurti PJ, Holland JB.

Nat Genet. 2011 Feb;43(2):163-8. doi: 10.1038/ng.747. Epub 2011 Jan 9.

PMID:
21217757
17.

Genetic properties of the maize nested association mapping population.

McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, Kroon D, Lepak N, Mitchell SE, Peterson B, Pressoir G, Romero S, Oropeza Rosas M, Salvo S, Yates H, Hanson M, Jones E, Smith S, Glaubitz JC, Goodman M, Ware D, Holland JB, Buckler ES.

Science. 2009 Aug 7;325(5941):737-40. doi: 10.1126/science.1174320.

18.

The genetic architecture of maize flowering time.

Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, Lepak NK, Li H, Mitchell SE, Pressoir G, Peiffer JA, Rosas MO, Rocheford TR, Romay MC, Romero S, Salvo S, Sanchez Villeda H, da Silva HS, Sun Q, Tian F, Upadyayula N, Ware D, Yates H, Yu J, Zhang Z, Kresovich S, McMullen MD.

Science. 2009 Aug 7;325(5941):714-8. doi: 10.1126/science.1174276.

19.

Positively selected disease response orthologous gene sets in the cereals identified using Sorghum bicolor L. Moench expression profiles and comparative genomics.

Zamora A, Sun Q, Hamblin MT, Aquadro CF, Kresovich S.

Mol Biol Evol. 2009 Sep;26(9):2015-30. doi: 10.1093/molbev/msp114. Epub 2009 Jun 8.

20.

Isolation and characterization of microsatellite loci for the Asian longhorned beetle, Anoplophora glabripennis.

Carter M, Casa AM, Zeid M, Mitchell SE, Kresovich S.

Mol Ecol Resour. 2009 May;9(3):925-8. doi: 10.1111/j.1755-0998.2008.02485.x. Epub 2009 Jan 22.

PMID:
21564793
21.

The Sorghum bicolor genome and the diversification of grasses.

Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS.

Nature. 2009 Jan 29;457(7229):551-6. doi: 10.1038/nature07723.

PMID:
19189423
22.

Natural variation in maize architecture is mediated by allelic differences at the PINOID co-ortholog barren inflorescence2.

Pressoir G, Brown PJ, Zhu W, Upadyayula N, Rocheford T, Buckler ES, Kresovich S.

Plant J. 2009 May;58(4):618-28. doi: 10.1111/j.1365-313X.2009.03802.x. Epub 2009 Jan 19.

23.

Efficient mapping of plant height quantitative trait loci in a sorghum association population with introgressed dwarfing genes.

Brown PJ, Rooney WL, Franks C, Kresovich S.

Genetics. 2008 Sep;180(1):629-37. doi: 10.1534/genetics.108.092239. Epub 2008 Aug 30.

24.

A weak effect of background selection on trinucleotide microsatellites in maize.

Thuillet AC, Tenaillon MI, Anderson LK, Mitchell SE, Kresovich S, Stack SM, Gaut B, Doebley J.

J Hered. 2008 Jan-Feb;99(1):45-55. Epub 2007 Oct 24.

PMID:
17962226
25.

Inheritance of inflorescence architecture in sorghum.

Brown PJ, Klein PE, Bortiri E, Acharya CB, Rooney WL, Kresovich S.

Theor Appl Genet. 2006 Sep;113(5):931-42. Epub 2006 Jul 18.

PMID:
16847662
26.

Challenges of detecting directional selection after a bottleneck: lessons from Sorghum bicolor.

Hamblin MT, Casa AM, Sun H, Murray SC, Paterson AH, Aquadro CF, Kresovich S.

Genetics. 2006 Jun;173(2):953-64. Epub 2006 Mar 17.

27.

Alignment of genetic maps and QTLs between inter- and intra-specific sorghum populations.

Feltus FA, Hart GE, Schertz KF, Casa AM, Kresovich S, Abraham S, Klein PE, Brown PJ, Paterson AH.

Theor Appl Genet. 2006 May;112(7):1295-305. Epub 2006 Feb 21.

PMID:
16491426
28.

Panzea: a database and resource for molecular and functional diversity in the maize genome.

Zhao W, Canaran P, Jurkuta R, Fulton T, Glaubitz J, Buckler E, Doebley J, Gaut B, Goodman M, Holland J, Kresovich S, McMullen M, Stein L, Ware D.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D752-7.

29.

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness.

Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S, Buckler ES.

Nat Genet. 2006 Feb;38(2):203-8. Epub 2005 Dec 25.

PMID:
16380716
30.

Maize association population: a high-resolution platform for quantitative trait locus dissection.

Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES.

Plant J. 2005 Dec;44(6):1054-64.

31.

Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor.

Hamblin MT, Salas Fernandez MG, Casa AM, Mitchell SE, Paterson AH, Kresovich S.

Genetics. 2005 Nov;171(3):1247-56. Epub 2005 Sep 12.

32.

Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats.

Casa AM, Mitchell SE, Hamblin MT, Sun H, Bowers JE, Paterson AH, Aquadro CF, Kresovich S.

Theor Appl Genet. 2005 Jun;111(1):23-30. Epub 2005 Apr 28.

PMID:
15864526
33.

Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance.

Wisser RJ, Sun Q, Hulbert SH, Kresovich S, Nelson RJ.

Genetics. 2005 Apr;169(4):2277-93. Epub 2005 Feb 16.

34.

An analysis of genetic diversity across the maize genome using microsatellites.

Vigouroux Y, Mitchell S, Matsuoka Y, Hamblin M, Kresovich S, Smith JS, Jaqueth J, Smith OS, Doebley J.

Genetics. 2005 Mar;169(3):1617-30. Epub 2005 Jan 16.

35.

Genetic structure and diversity in Oryza sativa L.

Garris AJ, Tai TH, Coburn J, Kresovich S, McCouch S.

Genetics. 2005 Mar;169(3):1631-8. Epub 2005 Jan 16.

36.

Genetic diversity of peanut (Arachis hypogaea L.) and its wild relatives based on the analysis of hypervariable regions of the genome.

Moretzsohn Mde C, Hopkins MS, Mitchell SE, Kresovich S, Valls JF, Ferreira ME.

BMC Plant Biol. 2004 Jul 14;4:11.

37.

Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor.

Hamblin MT, Mitchell SE, White GM, Gallego J, Kukatla R, Wing RA, Paterson AH, Kresovich S.

Genetics. 2004 May;167(1):471-83.

38.

Microsatellite identification and characterization in peanut ( A. hypogaea L.).

Ferguson ME, Burow MD, Schulze SR, Bramel PJ, Paterson AH, Kresovich S, Mitchell S.

Theor Appl Genet. 2004 Apr;108(6):1064-70. Epub 2003 Dec 11.

PMID:
15067392
39.

Molecular evolution of the phytochrome gene family in sorghum: changing rates of synonymous and replacement evolution.

White GM, Hamblin MT, Kresovich S.

Mol Biol Evol. 2004 Apr;21(4):716-23. Epub 2004 Feb 12.

PMID:
14963106
41.

A high-density genetic recombination map of sequence-tagged sites for sorghum, as a framework for comparative structural and evolutionary genomics of tropical grains and grasses.

Bowers JE, Abbey C, Anderson S, Chang C, Draye X, Hoppe AH, Jessup R, Lemke C, Lennington J, Li Z, Lin YR, Liu SC, Luo L, Marler BS, Ming R, Mitchell SE, Qiang D, Reischmann K, Schulze SR, Skinner DN, Wang YW, Kresovich S, Schertz KF, Paterson AH.

Genetics. 2003 Sep;165(1):367-86.

42.

Simple sequence repeat marker diversity in cassava landraces: genetic diversity and differentiation in an asexually propagated crop.

Fregene MA, Suarez M, Mkumbira J, Kulembeka H, Ndedya E, Kulaya A, Mitchel S, Gullberg U, Rosling H, Dixon AG, Dean R, Kresovich S.

Theor Appl Genet. 2003 Oct;107(6):1083-93. Epub 2003 Jul 11.

PMID:
12856084
43.

High resolution genetic mapping and candidate gene identification at the xa5 locus for bacterial blight resistance in rice ( Oryza sativa L.).

Blair MW, Garris AJ, Iyer AS, Chapman B, Kresovich S, McCouch SR.

Theor Appl Genet. 2003 Jun;107(1):62-73. Epub 2003 Apr 3.

PMID:
12677405
44.

Characterization of RFLP probe sequences for gene discovery and SSR development in Sorghum bicolor (L.) Moench.

Schloss J, Mitchell E, White M, Kukatla R, Bowers E, Paterson H, Kresovich S.

Theor Appl Genet. 2002 Nov;105(6-7):912-920. Epub 2002 Jul 30.

PMID:
12582917
45.

Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies.

Matsuoka Y, Mitchell SE, Kresovich S, Goodman M, Doebley J.

Theor Appl Genet. 2002 Feb;104(2-3):436-450.

PMID:
12582717
46.

Evaluation of Hbr (MITE) markers for assessment of genetic relationships among maize ( Zea mays L.) inbred lines.

Casa AM, Mitchell SE, Smith OS, Register JC 3rd, Wessler SR, Kresovich S.

Theor Appl Genet. 2002 Jan;104(1):104-10.

PMID:
12579434
47.

Identifying genes of agronomic importance in maize by screening microsatellites for evidence of selection during domestication.

Vigouroux Y, McMullen M, Hittinger CT, Houchins K, Schulz L, Kresovich S, Matsuoka Y, Doebley J.

Proc Natl Acad Sci U S A. 2002 Jul 23;99(15):9650-5. Epub 2002 Jul 8.

48.

Solid-phase PCR in microwells: effects of linker length and composition on tethering, hybridization, and extension.

Carmon A, Vision TJ, Mitchell SE, Thannhauser TW, Müller U, Kresovich S.

Biotechniques. 2002 Feb;32(2):410, 412, 414-8, 420.

49.

Structure of linkage disequilibrium and phenotypic associations in the maize genome.

Remington DL, Thornsberry JM, Matsuoka Y, Wilson LM, Whitt SR, Doebley J, Kresovich S, Goodman MM, Buckler ES 4th.

Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11479-84. Epub 2001 Sep 18.

50.

Molecular diversity, structure and domestication of grasses.

Buckler ES 4th, Thornsberry JM, Kresovich S.

Genet Res. 2001 Jun;77(3):213-8. Review. No abstract available.

PMID:
11486504

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