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Machine learning polymer models of three-dimensional chromatin organization in human lymphoblastoid cells.

Al Bkhetan Z, Kadlof M, Kraft A, Plewczynski D.

Methods. 2019 Mar 7. pii: S1046-2023(18)30334-7. doi: 10.1016/j.ymeth.2019.03.002. [Epub ahead of print]


New entities, new technologies, new findings: A review of the cytologic features of recently established subtypes of renal cell carcinoma.

Robila V, Kraft AO, Smith SC.

Cancer Cytopathol. 2019 Feb;127(2):79-97. doi: 10.1002/cncy.22093. Epub 2019 Jan 28. Review.


Convergent validity of an activity-space survey for use in health research.

Zenk SN, Kraft AN, Jones KK, Matthews SA.

Health Place. 2019 Mar;56:19-23. doi: 10.1016/j.healthplace.2019.01.009. Epub 2019 Jan 23.


Sclerosing mucoepidermoid carcinoma with eosinophilia of the thyroid: Case report of a rare lesion with novel genetic mutation.

Wiles AB, Kraft AO, Mueller SM, Powers CN.

Diagn Cytopathol. 2019 Jan 24. doi: 10.1002/dc.24148. [Epub ahead of print]


Cell-Type-Specific Profiling of Alternative Translation Identifies Regulated Protein Isoform Variation in the Mouse Brain.

Sapkota D, Lake AM, Yang W, Yang C, Wesseling H, Guise A, Uncu C, Dalal JS, Kraft AW, Lee JM, Sands MS, Steen JA, Dougherty JD.

Cell Rep. 2019 Jan 15;26(3):594-607.e7. doi: 10.1016/j.celrep.2018.12.077.


Delirium is associated with frequency band specific dysconnectivity in intrinsic connectivity networks: preliminary evidence from a large retrospective pilot case-control study.

Fleischmann R, Traenkner S, Kraft A, Schmidt S, Schreiber SJ, Brandt SA.

Pilot Feasibility Stud. 2019 Jan 7;5:2. doi: 10.1186/s40814-018-0388-z. eCollection 2019.


Isolation of Bacterial RNA from Foods Inoculated with Pathogens.

Tyagi D, Kraft AL, Bergholz TM.

Methods Mol Biol. 2019;1918:129-137. doi: 10.1007/978-1-4939-9000-9_10.


Management and prognostic markers in patients with autoimmune encephalitis requiring ICU treatment.

Schubert J, Brämer D, Huttner HB, Gerner ST, Fuhrer H, Melzer N, Dik A, Prüss H, Ly LT, Fuchs K, Leypoldt F, Nissen G, Schirotzek I, Dohmen C, Bösel J, Lewerenz J, Thaler F, Kraft A, Juranek A, Ringelstein M, Sühs KW, Urbanek C, Scherag A, Geis C, Witte OW, Günther A; GENERATE and IGNITE network.

Neurol Neuroimmunol Neuroinflamm. 2018 Oct 30;6(1):e514. doi: 10.1212/NXI.0000000000000514. eCollection 2019 Jan.


Spiroergometric measurements under increased inspiratory oxygen concentration (FIO2)-Putting the Haldane transformation to the test.

Lang S, Herold R, Kraft A, Harth V, Preisser AM.

PLoS One. 2018 Dec 12;13(12):e0207648. doi: 10.1371/journal.pone.0207648. eCollection 2018.


Racial/ethnic and educational differences in perceptions and use of a new urban trail.

Kraft AN, Nunez J, Tarlov E, Slater S, Zenk SN.

Ethn Health. 2018 Oct 29:1-16. doi: 10.1080/13557858.2018.1539218. [Epub ahead of print]


Targeting PIM Kinase with PD1 Inhibition Improves Immunotherapeutic Antitumor T-cell Response.

Chatterjee S, Chakraborty P, Daenthanasanmak A, Iamsawat S, Andrejeva G, Luevano LA, Wolf M, Baliga U, Krieg C, Beeson CC, Mehrotra M, Hill EG, Rathmell JC, Yu XZ, Kraft AS, Mehrotra S.

Clin Cancer Res. 2019 Feb 1;25(3):1036-1049. doi: 10.1158/1078-0432.CCR-18-0706. Epub 2018 Oct 16.


Mechanisms Behind Resistance to PI3K Inhibitor Treatment Induced by the PIM Kinase.

Song JH, Singh N, Luevano LA, Padi SKR, Okumura K, Olive V, Black SM, Warfel NA, Goodrich DW, Kraft AS.

Mol Cancer Ther. 2018 Dec;17(12):2710-2721. doi: 10.1158/1535-7163.MCT-18-0374. Epub 2018 Sep 6.


Heart failure leads to altered β2-adrenoceptor/cyclic adenosine monophosphate dynamics in the sarcolemmal phospholemman/Na,K ATPase microdomain.

Bastug-Özel Z, Wright PT, Kraft AE, Pavlovic D, Howie J, Froese A, Fuller W, Gorelik J, Shattock MJ, Nikolaev VO.

Cardiovasc Res. 2019 Mar 1;115(3):546-555. doi: 10.1093/cvr/cvy221.


Tryptophan immunoadsorption during pregnancy and breastfeeding in patients with acute relapse of multiple sclerosis and neuromyelitis optica.

Hoffmann F, Kraft A, Heigl F, Mauch E, Koehler J, Harms L, Kümpfel T, Köhler W, Ehrlich S, Bayas A, Weinmann-Menke J, Beuker C, Henn KH, Ayzenberg I, Ellrichmann G, Hellwig K, Klingel R, Fassbender CM, Fritz H, Slowinski T, Weihprecht H, Brand M, Stiegler T, Galle J, Schimrigk S.

Ther Adv Neurol Disord. 2018 May 28;11:1756286418774973. doi: 10.1177/1756286418774973. eCollection 2018.


Interferon-free therapy in hepatitis C virus (HCV) monoinfected and HCV/HIV coinfected patients: effect on cognitive function, fatigue, and mental health.

Kleefeld F, Heller S, Ingiliz P, Jessen H, Petersen A, Kopp U, Kraft A, Hahn K.

J Neurovirol. 2018 Oct;24(5):557-569. doi: 10.1007/s13365-018-0647-z. Epub 2018 May 21.


PIM-2 protein kinase negatively regulates T cell responses in transplantation and tumor immunity.

Daenthanasanmak A, Wu Y, Iamsawat S, Nguyen HD, Bastian D, Zhang M, Sofi MH, Chatterjee S, Hill EG, Mehrotra S, Kraft AS, Yu XZ.

J Clin Invest. 2018 Jul 2;128(7):2787-2801. doi: 10.1172/JCI95407. Epub 2018 May 21.


Hepatitis B virus-specific T cell responses after stopping nucleos(t)ide analogue therapy in HBeAg-negative chronic hepatitis B.

Rinker F, Zimmer CL, Höner Zu Siederdissen C, Manns MP, Kraft ARM, Wedemeyer H, Björkström NK, Cornberg M.

J Hepatol. 2018 Sep;69(3):584-593. doi: 10.1016/j.jhep.2018.05.004. Epub 2018 Jun 29.


Spontaneous Infra-slow Brain Activity Has Unique Spatiotemporal Dynamics and Laminar Structure.

Mitra A, Kraft A, Wright P, Acland B, Snyder AZ, Rosenthal Z, Czerniewski L, Bauer A, Snyder L, Culver J, Lee JM, Raichle ME.

Neuron. 2018 Apr 18;98(2):297-305.e6. doi: 10.1016/j.neuron.2018.03.015. Epub 2018 Mar 29.


Genetic predisposition in anti-LGI1 and anti-NMDA receptor encephalitis.

Mueller SH, Färber A, Prüss H, Melzer N, Golombeck KS, Kümpfel T, Thaler F, Elisak M, Lewerenz J, Kaufmann M, Sühs KW, Ringelstein M, Kellinghaus C, Bien CG, Kraft A, Zettl UK, Ehrlich S, Handreka R, Rostásy K, Then Bergh F, Faiss JH, Lieb W, Franke A, Kuhlenbäumer G, Wandinger KP, Leypoldt F; German Network for Research on Autoimmune Encephalitis (GENERATE).

Ann Neurol. 2018 Apr;83(4):863-869. doi: 10.1002/ana.25216.


How many days of global positioning system (GPS) monitoring do you need to measure activity space environments in health research?

Zenk SN, Matthews SA, Kraft AN, Jones KK.

Health Place. 2018 May;51:52-60. doi: 10.1016/j.healthplace.2018.02.004.


Designing a large field-of-view two-photon microscope using optical invariant analysis.

Bumstead JR, Park JJ, Rosen IA, Kraft AW, Wright PW, Reisman MD, Côté DC, Culver JP.

Neurophotonics. 2018 Apr;5(2):025001. doi: 10.1117/1.NPh.5.2.025001. Epub 2018 Feb 19.


Papillary thyroid carcinoma presenting as acute suppurative thyroiditis: A case report and review of the literature.

Kalladi Puthanpurayil S, Francis GL, Kraft AO, Prasad U, Petersson RS.

Int J Pediatr Otorhinolaryngol. 2018 Feb;105:12-15. doi: 10.1016/j.ijporl.2017.11.032. Epub 2017 Dec 5. Review.


Personalized risk prediction of postoperative cognitive impairment - rationale for the EU-funded BioCog project.

Winterer G, Androsova G, Bender O, Boraschi D, Borchers F, Dschietzig TB, Feinkohl I, Fletcher P, Gallinat J, Hadzidiakos D, Haynes JD, Heppner F, Hetzer S, Hendrikse J, Ittermann B, Kant IMJ, Kraft A, Krannich A, Krause R, Kühn S, Lachmann G, van Montfort SJT, Müller A, Nürnberg P, Ofosu K, Pietsch M, Pischon T, Preller J, Renzulli E, Scheurer K, Schneider R, Slooter AJC, Spies C, Stamatakis E, Volk HD, Weber S, Wolf A, Yürek F, Zacharias N; BioCog consortium.

Eur Psychiatry. 2018 Apr;50:34-39. doi: 10.1016/j.eurpsy.2017.10.004. Epub 2018 Feb 3.


Sensory deprivation after focal ischemia in mice accelerates brain remapping and improves functional recovery through Arc-dependent synaptic plasticity.

Kraft AW, Bauer AQ, Culver JP, Lee JM.

Sci Transl Med. 2018 Jan 31;10(426). pii: eaag1328. doi: 10.1126/scitranslmed.aag1328.


Measuring Anomalous Heating in a Planar Ion Trap with Variable Ion-Surface Separation.

Boldin IA, Kraft A, Wunderlich C.

Phys Rev Lett. 2018 Jan 12;120(2):023201. doi: 10.1103/PhysRevLett.120.023201.


Taming the Cationic Beast: Novel Developments in the Synthesis and Application of Weakly Coordinating Anions.

Riddlestone IM, Kraft A, Schaefer J, Krossing I.

Angew Chem Int Ed Engl. 2018 Oct 22;57(43):13982-14024. doi: 10.1002/anie.201710782. Epub 2018 Sep 13. Review.


Giant cell tumor of temporomandibular joint presenting as a parotid tumor: Challenges in the accurate subclassification of giant cell tumors in an unusual location.

Ren R, Mueller S, Kraft AO, Powers CN.

Diagn Cytopathol. 2018 Apr;46(4):340-344. doi: 10.1002/dc.23848. Epub 2017 Nov 30.


Mobile electronic versus paper case report forms in clinical trials: a randomized controlled trial.

Fleischmann R, Decker AM, Kraft A, Mai K, Schmidt S.

BMC Med Res Methodol. 2017 Dec 1;17(1):153. doi: 10.1186/s12874-017-0429-y.


Effective Connectivity Measured Using Optogenetically Evoked Hemodynamic Signals Exhibits Topography Distinct from Resting State Functional Connectivity in the Mouse.

Bauer AQ, Kraft AW, Baxter GA, Wright PW, Reisman MD, Bice AR, Park JJ, Bruchas MR, Snyder AZ, Lee JM, Culver JP.

Cereb Cortex. 2018 Jan 1;28(1):370-386. doi: 10.1093/cercor/bhx298.


Visual experience sculpts whole-cortex spontaneous infraslow activity patterns through an Arc-dependent mechanism.

Kraft AW, Mitra A, Bauer AQ, Snyder AZ, Raichle ME, Culver JP, Lee JM.

Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):E9952-E9961. doi: 10.1073/pnas.1711789114. Epub 2017 Oct 30.


Hypoxia-Inducible PIM Kinase Expression Promotes Resistance to Antiangiogenic Agents.

Casillas AL, Toth RK, Sainz AG, Singh N, Desai AA, Kraft AS, Warfel NA.

Clin Cancer Res. 2018 Jan 1;24(1):169-180. doi: 10.1158/1078-0432.CCR-17-1318. Epub 2017 Oct 30.


Functional connectivity structure of cortical calcium dynamics in anesthetized and awake mice.

Wright PW, Brier LM, Bauer AQ, Baxter GA, Kraft AW, Reisman MD, Bice AR, Snyder AZ, Lee JM, Culver JP.

PLoS One. 2017 Oct 19;12(10):e0185759. doi: 10.1371/journal.pone.0185759. eCollection 2017.


Metal-Based Diversity for Crystalline Metal-Fullerene Frameworks.

Kraft A, Roger C, Schmidt D, Stangl J, Müller-Buschbaum K, Beuerle F.

Chemistry. 2017 Nov 13;23(63):15864-15868. doi: 10.1002/chem.201703709. Epub 2017 Oct 10.


Long-Lasting Enhancement of Visual Perception with Repetitive Noninvasive Transcranial Direct Current Stimulation.

Behrens JR, Kraft A, Irlbacher K, Gerhardt H, Olma MC, Brandt SA.

Front Cell Neurosci. 2017 Aug 15;11:238. doi: 10.3389/fncel.2017.00238. eCollection 2017.


Hepatitis E virus-induced primary cutaneous CD30(+) T cell lymphoproliferative disorder.

Mallet V, Bruneau J, Zuber J, Alanio C, Leclerc-Mercier S, Roque-Afonso AM, Kraft ARM, Couronné L, Roulot D, Wedemeyer H, Albert ML, Hillon P, Laroche L, Pol S, Hermine O.

J Hepatol. 2017 Dec;67(6):1334-1339. doi: 10.1016/j.jhep.2017.08.011. Epub 2017 Aug 30.


Hepatitis E virus ORF 1 induces proliferative and functional T-cell responses in patients with ongoing and resolved hepatitis E.

Al-Ayoubi J, Behrendt P, Bremer B, Suneetha PV, Gisa A, Rinker F, Manns MP, Cornberg M, Wedemeyer H, Kraft ARM.

Liver Int. 2018 Feb;38(2):266-277. doi: 10.1111/liv.13521. Epub 2017 Aug 20.


Angiosarcoma treated successfully with anti-PD-1 therapy - a case report.

Sindhu S, Gimber LH, Cranmer L, McBride A, Kraft AS.

J Immunother Cancer. 2017 Jul 18;5(1):58. doi: 10.1186/s40425-017-0263-0.


Comparison of immunomagnetic separation beads for detection of six non-O157 Shiga toxin-producing Escherichia coli serogroups in different matrices.

Kraft AL, Lacher DW, Shelver WL, Sherwood JS, Bergholz TM.

Lett Appl Microbiol. 2017 Sep;65(3):213-219. doi: 10.1111/lam.12771. Epub 2017 Jul 25.


Specimen acquisition: ROSEs, gardeners, and gatekeepers.

Kraft AO.

Cancer Cytopathol. 2017 Jun;125(S6):449-454. doi: 10.1002/cncy.21870.


Retraction Note to: Increased neuroinflammatory and arachidonic acid cascade markers, and reduced synaptic proteins, in brain of HIV-1 transgenic rats.

Rao JS, Kim HW, Kellom M, Greenstein D, Chen M, Kraft AD, Harry GJ, Rapoport SI, Basselin M.

J Neuroinflammation. 2017 May 9;14(1):95. doi: 10.1186/s12974-017-0872-z. No abstract available.


High-Affinity Copolymers Inhibit Digestive Enzymes by Surface Recognition.

Gilles P, Wenck K, Stratmann I, Kirsch M, Smolin DA, Schaller T, de Groot H, Kraft A, Schrader T.

Biomacromolecules. 2017 Jun 12;18(6):1772-1784. doi: 10.1021/acs.biomac.7b00162. Epub 2017 May 9.


Targeting the PIM protein kinases for the treatment of a T-cell acute lymphoblastic leukemia subset.

Padi SKR, Luevano LA, An N, Pandey R, Singh N, Song JH, Aster JC, Yu XZ, Mehrotra S, Kraft AS.

Oncotarget. 2017 May 2;8(18):30199-30216. doi: 10.18632/oncotarget.16320.


FRET Microscopy for Real-Time Visualization of Second Messengers in Living Cells.

Kraft AE, Nikolaev VO.

Methods Mol Biol. 2017;1563:85-90. doi: 10.1007/978-1-4939-6810-7_6.


Instructions for masking the taste of medication for children: Validation of a pictogram tool.

Vaillancourt R, Truong Y, Karmali S, Kraft A, Manji S, Villarreal G, Pouliot A.

Can Pharm J (Ott). 2016 Oct 4;150(1):52-59. doi: 10.1177/1715163516669383. eCollection 2017 Jan-Feb. Erratum in: Can Pharm J (Ott). 2016 Dec 15;150(1):NP1.


Simultaneous Papillary Carcinoma in Thyroglossal Duct Cyst and Thyroid.

Penna GC, Mendes HG, Kraft AO, Berenstein CK, Fonseca B, Martorina WJ, de Souza AL, Meyer de Moraes G, Rajão KM, Sousa BÉ.

Case Rep Endocrinol. 2017;2017:8541078. doi: 10.1155/2017/8541078. Epub 2017 Feb 8.


Astrocytic Calcium Waves Signal Brain Injury to Neural Stem and Progenitor Cells.

Kraft A, Jubal ER, von Laer R, Döring C, Rocha A, Grebbin M, Zenke M, Kettenmann H, Stroh A, Momma S.

Stem Cell Reports. 2017 Mar 14;8(3):701-714. doi: 10.1016/j.stemcr.2017.01.009. Epub 2017 Feb 16.


Supramolecular frameworks based on [60]fullerene hexakisadducts.

Kraft A, Stangl J, Krause AM, Müller-Buschbaum K, Beuerle F.

Beilstein J Org Chem. 2017 Jan 2;13:1-9. doi: 10.3762/bjoc.13.1. eCollection 2017.


Peptide Fractions Obtained from Rice By-Products by Means of an Environment-Friendly Process Show In Vitro Health-Related Bioactivities.

Ferri M, Graen-Heedfeld J, Bretz K, Guillon F, Michelini E, Calabretta MM, Lamborghini M, Gruarin N, Roda A, Kraft A, Tassoni A.

PLoS One. 2017 Jan 26;12(1):e0170954. doi: 10.1371/journal.pone.0170954. eCollection 2017.

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