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Items: 21

1.

Two-Dimensional High-Throughput Endo-Enzyme Screening Assays Based on Chromogenic Polysaccharide Hydrogel and Complex Biomass Substrates.

Schückel J, Kračun SK.

Methods Mol Biol. 2018;1796:201-217. doi: 10.1007/978-1-4939-7877-9_15.

PMID:
29856056
2.

Report on the Current Inventory of the Toolbox for Plant Cell Wall Analysis: Proteinaceous and Small Molecular Probes.

Rydahl MG, Hansen AR, Kračun SK, Mravec J.

Front Plant Sci. 2018 May 3;9:581. doi: 10.3389/fpls.2018.00581. eCollection 2018. Review.

3.

Synthesis of branched and linear 1,4-linked galactan oligosaccharides.

Andersen MCF, Boos I, Kinnaert C, Awan SI, Pedersen HL, Kračun SK, Lanz G, Rydahl MG, Kjærulff L, Håkansson M, Kimbung R, Logan DT, Gotfredsen CH, Willats WGT, Clausen MH.

Org Biomol Chem. 2018 Feb 14;16(7):1157-1162. doi: 10.1039/c7ob03035e.

PMID:
29367995
4.

Enzyme Activities at Different Stages of Plant Biomass Decomposition in Three Species of Fungus-Growing Termites.

da Costa RR, Hu H, Pilgaard B, Vreeburg SME, Schückel J, Pedersen KSK, Kračun SK, Busk PK, Harholt J, Sapountzis P, Lange L, Aanen DK, Poulsen M.

Appl Environ Microbiol. 2018 Feb 14;84(5). pii: e01815-17. doi: 10.1128/AEM.01815-17. Print 2018 Mar 1.

5.

Click chemistry-based tracking reveals putative cell wall-located auxin binding sites in expanding cells.

Mravec J, Kračun SK, Zemlyanskaya E, Rydahl MG, Guo X, Pičmanová M, Sørensen KK, Růžička K, Willats WGT.

Sci Rep. 2017 Nov 22;7(1):15988. doi: 10.1038/s41598-017-16281-w.

6.

Branched Pectic Galactan in Phloem-Sieve-Element Cell Walls: Implications for Cell Mechanics.

Torode TA, O'Neill R, Marcus SE, Cornuault V, Pose S, Lauder RP, Kračun SK, Rydahl MG, Andersen MCF, Willats WGT, Braybrook SA, Townsend BJ, Clausen MH, Knox JP.

Plant Physiol. 2018 Feb;176(2):1547-1558. doi: 10.1104/pp.17.01568. Epub 2017 Nov 17.

7.

An oligogalacturonide-derived molecular probe demonstrates the dynamics of calcium-mediated pectin complexation in cell walls of tip-growing structures.

Mravec J, Kračun SK, Rydahl MG, Westereng B, Pontiggia D, De Lorenzo G, Domozych DS, Willats WGT.

Plant J. 2017 Aug;91(3):534-546. doi: 10.1111/tpj.13574. Epub 2017 May 29.

8.

Pea Border Cell Maturation and Release Involve Complex Cell Wall Structural Dynamics.

Mravec J, Guo X, Hansen AR, Schückel J, Kračun SK, Mikkelsen MD, Mouille G, Johansen IE, Ulvskov P, Domozych DS, Willats WGT.

Plant Physiol. 2017 Jun;174(2):1051-1066. doi: 10.1104/pp.16.00097. Epub 2017 Apr 11.

9.

Characterization of the LM5 pectic galactan epitope with synthetic analogues of β-1,4-d-galactotetraose.

Andersen MC, Boos I, Marcus SE, Kračun SK, Rydahl MG, Willats WG, Knox JP, Clausen MH.

Carbohydr Res. 2016 Dec 21;436:36-40. doi: 10.1016/j.carres.2016.10.012. Epub 2016 Oct 30.

10.

Carbohydrate Microarray Technology Applied to High-Throughput Mapping of Plant Cell Wall Glycans Using Comprehensive Microarray Polymer Profiling (CoMPP).

Kračun SK, Fangel JU, Rydahl MG, Pedersen HL, Vidal-Melgosa S, Willats WG.

Methods Mol Biol. 2017;1503:147-165.

PMID:
27743365
11.

High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits.

Schückel J, Kračun SK, Willats WG.

J Vis Exp. 2016 Sep 20;(115). doi: 10.3791/54286.

12.

Characterization of three plant biomass-degrading microbial consortia by metagenomics- and metasecretomics-based approaches.

Jiménez DJ, de Lima Brossi MJ, Schückel J, Kračun SK, Willats WG, van Elsas JD.

Appl Microbiol Biotechnol. 2016 Dec;100(24):10463-10477. Epub 2016 Jul 14.

13.

Synthesis of β-1,4-Linked Galactan Side-Chains of Rhamnogalacturonan I.

Andersen MC, Kračun SK, Rydahl MG, Willats WG, Clausen MH.

Chemistry. 2016 Aug 8;22(33):11543-8. doi: 10.1002/chem.201602197. Epub 2016 Jul 12.

PMID:
27305141
14.

A new generation of versatile chromogenic substrates for high-throughput analysis of biomass-degrading enzymes.

Kračun SK, Schückel J, Westereng B, Thygesen LG, Monrad RN, Eijsink VGH, Willats WGT.

Biotechnol Biofuels. 2015 Apr 23;8:70. doi: 10.1186/s13068-015-0250-y. eCollection 2015.

15.

Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes.

Mravec J, Kračun SK, Rydahl MG, Westereng B, Miart F, Clausen MH, Fangel JU, Daugaard M, Van Cutsem P, De Fine Licht HH, Höfte H, Malinovsky FG, Domozych DS, Willats WG.

Development. 2014 Dec;141(24):4841-50. doi: 10.1242/dev.113365. Epub 2014 Nov 13.

16.

A polysaccharide utilization locus from an uncultured bacteroidetes phylotype suggests ecological adaptation and substrate versatility.

Mackenzie AK, Naas AE, Kracun SK, Schückel J, Fangel JU, Agger JW, Willats WG, Eijsink VG, Pope PB.

Appl Environ Microbiol. 2015 Jan;81(1):187-95. doi: 10.1128/AEM.02858-14. Epub 2014 Oct 17.

17.

Characterization of the viral O-glycopeptidome: a novel tool of relevance for vaccine design and serodiagnosis.

Cló E, Kracun SK, Nudelman AS, Jensen KJ, Liljeqvist JÅ, Olofsson S, Bergström T, Blixt O.

J Virol. 2012 Jun;86(11):6268-78. doi: 10.1128/JVI.00392-12. Epub 2012 Apr 4.

18.

Analysis of Tn antigenicity with a panel of new IgM and IgG1 monoclonal antibodies raised against leukemic cells.

Blixt O, Lavrova OI, Mazurov DV, Cló E, Kracun SK, Bovin NV, Filatov AV.

Glycobiology. 2012 Apr;22(4):529-42. doi: 10.1093/glycob/cwr178. Epub 2011 Dec 5.

19.

High throughput plasma N-glycome profiling using multiplexed labelling and UPLC with fluorescence detection.

Knežević A, Bones J, Kračun SK, Gornik O, Rudd PM, Lauc G.

Analyst. 2011 Nov 21;136(22):4670-3. doi: 10.1039/c1an15684e. Epub 2011 Sep 29.

PMID:
21956149
20.

Random glycopeptide bead libraries for seromic biomarker discovery.

Kracun SK, Cló E, Clausen H, Levery SB, Jensen KJ, Blixt O.

J Proteome Res. 2010 Dec 3;9(12):6705-14. doi: 10.1021/pr1008477. Epub 2010 Nov 2.

21.

Population substructure can significantly affect reliability of a DNA-led process of identification of mass fatality victims.

Kracun SK, Curić G, Birus I, Dzijan S, Lauc G.

J Forensic Sci. 2007 Jul;52(4):874-8.

PMID:
17567288

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