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Items: 38

1.

A Scalable, Multiplexed Assay for Decoding GPCR-Ligand Interactions with RNA Sequencing.

Jones EM, Jajoo R, Cancilla D, Lubock NB, Wang J, Satyadi M, Cheung R, de March C, Bloom JS, Matsunami H, Kosuri S.

Cell Syst. 2019 Mar 27;8(3):254-260.e6. doi: 10.1016/j.cels.2019.02.009. Epub 2019 Mar 20.

PMID:
30904378
2.

A Multiplexed Assay for Exon Recognition Reveals that an Unappreciated Fraction of Rare Genetic Variants Cause Large-Effect Splicing Disruptions.

Cheung R, Insigne KD, Yao D, Burghard CP, Wang J, Hsiao YE, Jones EM, Goodman DB, Xiao X, Kosuri S.

Mol Cell. 2019 Jan 3;73(1):183-194.e8. doi: 10.1016/j.molcel.2018.10.037. Epub 2018 Nov 29.

3.

Metagenomic mining of regulatory elements enables programmable species-selective gene expression.

Johns NI, Gomes ALC, Yim SS, Yang A, Blazejewski T, Smillie CS, Smith MB, Alm EJ, Kosuri S, Wang HH.

Nat Methods. 2018 May;15(5):323-329. doi: 10.1038/nmeth.4633. Epub 2018 Mar 19.

4.

Molecular Minimal Residual Disease Testing in Acute Myeloid Leukemia: A Review for the Practicing Clinician.

Hantel A, Stock W, Kosuri S.

Clin Lymphoma Myeloma Leuk. 2018 Oct;18(10):636-647. doi: 10.1016/j.clml.2018.06.017. Epub 2018 Jun 27. Review.

PMID:
30006258
5.

Highly parallel genome variant engineering with CRISPR-Cas9.

Sadhu MJ, Bloom JS, Day L, Siegel JJ, Kosuri S, Kruglyak L.

Nat Genet. 2018 Apr;50(4):510-514. doi: 10.1038/s41588-018-0087-y. Epub 2018 Apr 9.

6.

Systematic Dissection of Sequence Elements Controlling σ70 Promoters Using a Genomically Encoded Multiplexed Reporter Assay in Escherichia coli.

Urtecho G, Tripp AD, Insigne KD, Kim H, Kosuri S.

Biochemistry. 2019 Mar 19;58(11):1539-1551. doi: 10.1021/acs.biochem.7b01069. Epub 2018 Dec 21.

7.

A phase I study of selinexor in combination with high-dose cytarabine and mitoxantrone for remission induction in patients with acute myeloid leukemia.

Wang AY, Weiner H, Green M, Chang H, Fulton N, Larson RA, Odenike O, Artz AS, Bishop MR, Godley LA, Thirman MJ, Kosuri S, Churpek JE, Curran E, Pettit K, Stock W, Liu H.

J Hematol Oncol. 2018 Jan 5;11(1):4. doi: 10.1186/s13045-017-0550-8.

8.

Multiplexed gene synthesis in emulsions for exploring protein functional landscapes.

Plesa C, Sidore AM, Lubock NB, Zhang D, Kosuri S.

Science. 2018 Jan 19;359(6373):343-347. doi: 10.1126/science.aao5167. Epub 2018 Jan 4.

9.

Impact of Toxicity on Survival for Older Adult Patients after CD34+ Selected Allogeneic Hematopoietic Stem Cell Transplantation.

Shah GL, Scordo M, Kosuri S, Herrera DA, Cho C, Devlin SM, Borrill T, Carlow DC, Avecilla ST, Meagher RC, O'Reilly RJ, Jakubowski AA, Papadopoulos EB, Koehne G, Gyurkocza B, Castro-Malaspina H, Shaffer BC, Perales MA, Giralt SA, Tamari R.

Biol Blood Marrow Transplant. 2018 Jan;24(1):142-149. doi: 10.1016/j.bbmt.2017.08.040. Epub 2017 Sep 22.

10.

A systematic comparison of error correction enzymes by next-generation sequencing.

Lubock NB, Zhang D, Sidore AM, Church GM, Kosuri S.

Nucleic Acids Res. 2017 Sep 6;45(15):9206-9217. doi: 10.1093/nar/gkx691.

11.

Effects of Late Toxicities on Outcomes in Long-Term Survivors of Ex-Vivo CD34+-Selected Allogeneic Hematopoietic Cell Transplantation.

Scordo M, Shah GL, Kosuri S, Herrera DA, Cho C, Devlin SM, Maloy MA, Nieves J, Borrill T, Avecilla ST, Meagher RC, Carlow DC, O'Reilly RJ, Papadopoulos EB, Jakubowski AA, Koehne G, Gyurkocza B, Castro-Malaspina H, Tamari R, Perales MA, Giralt SA, Shaffer BC.

Biol Blood Marrow Transplant. 2018 Jan;24(1):133-141. doi: 10.1016/j.bbmt.2017.08.033. Epub 2017 Sep 1.

12.

The Impact of Toxicities on First-Year Outcomes after Ex Vivo CD34+-Selected Allogeneic Hematopoietic Cell Transplantation in Adults with Hematologic Malignancies.

Kosuri S, Adrianzen Herrera D, Scordo M, Shah GL, Cho C, Devlin SM, Maloy MA, Nieves J, Borrill T, Carlow DC, Avecilla ST, Meagher RC, O'Reilly RJ, Papadopoulos EB, Jakubowski AA, Koehne G, Gyurkocza B, Castro-Malaspina H, Shaffer BC, Tamari R, Giralt SA, Perales MA.

Biol Blood Marrow Transplant. 2017 Nov;23(11):2004-2011. doi: 10.1016/j.bbmt.2017.07.012. Epub 2017 Jul 18.

13.

Intestinal Microbiota and Relapse After Hematopoietic-Cell Transplantation.

Peled JU, Devlin SM, Staffas A, Lumish M, Khanin R, Littmann ER, Ling L, Kosuri S, Maloy M, Slingerland JB, Ahr KF, Porosnicu Rodriguez KA, Shono Y, Slingerland AE, Docampo MD, Sung AD, Weber D, Alousi AM, Gyurkocza B, Ponce DM, Barker JN, Perales MA, Giralt SA, Taur Y, Pamer EG, Jenq RR, van den Brink MRM.

J Clin Oncol. 2017 May 20;35(15):1650-1659. doi: 10.1200/JCO.2016.70.3348. Epub 2017 Mar 15.

14.

Prospective Evaluation of Unrelated Donor Cord Blood and Haploidentical Donor Access Reveals Graft Availability Varies by Patient Ancestry: Practical Implications for Donor Selection.

Kosuri S, Wolff T, Devlin SM, Byam C, Mazis CM, Naputo K, Davis E, Paulson J, Nhaissi M, Wells DS, Dahi P, Giralt SA, Jakubowski A, Perales MA, Shaffer BC, Scaradavou A, Ponce DM, Barker JN.

Biol Blood Marrow Transplant. 2017 Jun;23(6):965-970. doi: 10.1016/j.bbmt.2017.03.001. Epub 2017 Mar 2.

15.

Gain of chromosome 1q portends worse prognosis in multiple myeloma despite novel agent-based induction regimens and autologous transplantation.

Shah GL, Landau H, Londono D, Devlin SM, Kosuri S, Lesokhin AM, Lendvai N, Hassoun H, Chung DJ, Koehne G, Jhanwar SC, Landgren O, Levine R, Giralt SA.

Leuk Lymphoma. 2017 Aug;58(8):1823-1831. doi: 10.1080/10428194.2016.1260126. Epub 2017 Jan 12.

16.

Engineering an allosteric transcription factor to respond to new ligands.

Taylor ND, Garruss AS, Moretti R, Chan S, Arbing MA, Cascio D, Rogers JK, Isaacs FJ, Kosuri S, Baker D, Fields S, Church GM, Raman S.

Nat Methods. 2016 Feb;13(2):177-83. doi: 10.1038/nmeth.3696. Epub 2015 Dec 21.

17.

CD34-Selected Allogeneic Hematopoietic Stem Cell Transplantation for Patients with Relapsed, High-Risk Multiple Myeloma.

Smith E, Devlin SM, Kosuri S, Orlando E, Landau H, Lesokhin AM, Chung DJ, Hassoun H, Lendvai N, Landgren O, Giralt S, Chari A, Jagannath S, Koehne G.

Biol Blood Marrow Transplant. 2016 Feb;22(2):258-267. doi: 10.1016/j.bbmt.2015.08.025. Epub 2015 Aug 30.

18.

Direct mutagenesis of thousands of genomic targets using microarray-derived oligonucleotides.

Bonde MT, Kosuri S, Genee HJ, Sarup-Lytzen K, Church GM, Sommer MO, Wang HH.

ACS Synth Biol. 2015 Jan 16;4(1):17-22. doi: 10.1021/sb5001565. Epub 2014 Jun 20.

19.

Large-scale de novo DNA synthesis: technologies and applications.

Kosuri S, Church GM.

Nat Methods. 2014 May;11(5):499-507. doi: 10.1038/nmeth.2918. Review.

PMID:
24781323
20.

Role of human cytomegalovirus tegument proteins in virion assembly.

Smith RM, Kosuri S, Kerry JA.

Viruses. 2014 Feb 6;6(2):582-605. doi: 10.3390/v6020582. Review.

21.

Great expectations? Conditioning with busulfan, melphalan and thiotepa in recurrent Hodgkin lymphoma.

Kosuri S, van Besien K.

Leuk Lymphoma. 2014 Mar;55(3):476-7. doi: 10.3109/10428194.2014.887715. No abstract available.

PMID:
24471910
22.

Probing the limits of genetic recoding in essential genes.

Lajoie MJ, Kosuri S, Mosberg JA, Gregg CJ, Zhang D, Church GM.

Science. 2013 Oct 18;342(6156):361-3. doi: 10.1126/science.1241460.

23.

Causes and effects of N-terminal codon bias in bacterial genes.

Goodman DB, Church GM, Kosuri S.

Science. 2013 Oct 25;342(6157):475-9. doi: 10.1126/science.1241934. Epub 2013 Sep 26.

24.

Composability of regulatory sequences controlling transcription and translation in Escherichia coli.

Kosuri S, Goodman DB, Cambray G, Mutalik VK, Gao Y, Arkin AP, Endy D, Church GM.

Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):14024-9. doi: 10.1073/pnas.1301301110. Epub 2013 Aug 7.

25.

CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.

Mali P, Aach J, Stranges PB, Esvelt KM, Moosburner M, Kosuri S, Yang L, Church GM.

Nat Biotechnol. 2013 Sep;31(9):833-8. doi: 10.1038/nbt.2675. Epub 2013 Aug 1.

26.

When it rains, it pores.

Kosuri S, Sismour AM.

ACS Synth Biol. 2012 Apr 20;1(4):109-10. doi: 10.1021/sb300015f. No abstract available.

PMID:
23651112
27.

Next-generation digital information storage in DNA.

Church GM, Gao Y, Kosuri S.

Science. 2012 Sep 28;337(6102):1628. Epub 2012 Aug 16.

28.
29.

Gene Assembly from Chip-Synthesized Oligonucleotides.

Eroshenko N, Kosuri S, Marblestone AH, Conway N, Church GM.

Curr Protoc Chem Biol. 2012 Mar 1;2012. pii: ch110190.

30.

Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription.

Zhang F, Cong L, Lodato S, Kosuri S, Church GM, Arlotta P.

Nat Biotechnol. 2011 Feb;29(2):149-53. doi: 10.1038/nbt.1775. Epub 2011 Jan 19.

31.

Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips.

Kosuri S, Eroshenko N, Leproust EM, Super M, Way J, Li JB, Church GM.

Nat Biotechnol. 2010 Dec;28(12):1295-9. doi: 10.1038/nbt.1716. Epub 2010 Nov 28.

32.

Index of suspicion.

Moussa S, Huffman C, Penugonda M, Sabatino D, Sharma S, Ciminera P, Kosuri S, Rosenberg JJ, Rizkalla N, Hu E.

Pediatr Rev. 2009 Jun;30(6):217-22. doi: 10.1542/pir.30-6-217. No abstract available.

PMID:
19487430
33.

TABASCO: A single molecule, base-pair resolved gene expression simulator.

Kosuri S, Kelly JR, Endy D.

BMC Bioinformatics. 2007 Dec 19;8:480.

34.

Intramuscular injection of islet neogenesis-associated protein peptide stimulates pancreatic islet neogenesis in healthy dogs.

Pittenger GL, Taylor-Fishwick DA, Johns RH, Burcus N, Kosuri S, Vinik AI.

Pancreas. 2007 Jan;34(1):103-11.

PMID:
17198191
35.

Refactoring bacteriophage T7.

Chan LY, Kosuri S, Endy D.

Mol Syst Biol. 2005;1:2005.0018. Epub 2005 Sep 13.

36.

Solid and papillary epithelial neoplasm of the pancreas in an 11-year-old girl: case report and literature review.

Sabatino D, Kosuri S, Quiles R.

Pediatr Hematol Oncol. 2003 Jul-Aug;20(5):357-60. Review.

PMID:
12775532
37.

Cobalamin deficiency presenting with cutaneous hyperpigmentation: a report of two siblings.

Sabatino D, Kosuri S, Remollino A, Shotter B.

Pediatr Hematol Oncol. 1998 Sep-Oct;15(5):447-50.

PMID:
9783313
38.

Fever, hemorrhagic bullae and gastritis in a 20-month-old male.

Frieri M, Claus M, Martinez S, Annunziato D, Kosuri S, Lin J.

Ann Allergy. 1989 Sep;63(3):179-83. No abstract available.

PMID:
2774301

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