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Items: 1 to 50 of 53

1.

Phage resistance evolution in vitro is not reflective of in vivo outcome in a plant-bacteria-phage system.

Hernandez CA, Koskella B.

Evolution. 2019 Aug 21. doi: 10.1111/evo.13833. [Epub ahead of print]

PMID:
31433508
2.

Scientists' warning to humanity: microorganisms and climate change.

Cavicchioli R, Ripple WJ, Timmis KN, Azam F, Bakken LR, Baylis M, Behrenfeld MJ, Boetius A, Boyd PW, Classen AT, Crowther TW, Danovaro R, Foreman CM, Huisman J, Hutchins DA, Jansson JK, Karl DM, Koskella B, Mark Welch DB, Martiny JBH, Moran MA, Orphan VJ, Reay DS, Remais JV, Rich VI, Singh BK, Stein LY, Stewart FJ, Sullivan MB, van Oppen MJH, Weaver SC, Webb EA, Webster NS.

Nat Rev Microbiol. 2019 Sep;17(9):569-586. doi: 10.1038/s41579-019-0222-5. Epub 2019 Jun 18. Review.

PMID:
31213707
3.

New approaches to characterizing bacteria-phage interactions in microbial communities and microbiomes.

Koskella B.

Environ Microbiol Rep. 2019 Feb;11(1):15-16. doi: 10.1111/1758-2229.12706. Epub 2018 Nov 15. No abstract available.

PMID:
30431224
4.

Resistance gained, resistance lost: An explanation for host-parasite coexistence.

Koskella B.

PLoS Biol. 2018 Sep 24;16(9):e3000013. doi: 10.1371/journal.pbio.3000013. eCollection 2018 Sep.

5.

Nutrient- and Dose-Dependent Microbiome-Mediated Protection against a Plant Pathogen.

Berg M, Koskella B.

Curr Biol. 2018 Aug 6;28(15):2487-2492.e3. doi: 10.1016/j.cub.2018.05.085. Epub 2018 Jul 26.

6.

Multifaceted Impacts of Bacteriophages in the Plant Microbiome.

Koskella B, Taylor TB.

Annu Rev Phytopathol. 2018 Aug 25;56:361-380. doi: 10.1146/annurev-phyto-080417-045858. Epub 2018 Jun 29. Review.

PMID:
29958076
7.

Rapid quantification of bacteriophages and their bacterial hosts in vitro and in vivo using droplet digital PCR.

Morella NM, Yang SC, Hernandez CA, Koskella B.

J Virol Methods. 2018 Sep;259:18-24. doi: 10.1016/j.jviromet.2018.05.007. Epub 2018 May 30.

PMID:
29859196
8.

The impact of bacteriophages on phyllosphere bacterial abundance and composition.

Morella NM, Gomez AL, Wang G, Leung MS, Koskella B.

Mol Ecol. 2018 Apr;27(8):2025-2038. doi: 10.1111/mec.14542. Epub 2018 Mar 15.

PMID:
29457297
9.

Host-parasite fluctuating selection in the absence of specificity.

Best A, Ashby B, White A, Bowers R, Buckling A, Koskella B, Boots M.

Proc Biol Sci. 2017 Nov 15;284(1866). pii: 20171615. doi: 10.1098/rspb.2017.1615.

10.

The microbiome beyond the horizon of ecological and evolutionary theory.

Koskella B, Hall LJ, Metcalf CJE.

Nat Ecol Evol. 2017 Nov;1(11):1606-1615. doi: 10.1038/s41559-017-0340-2. Epub 2017 Oct 16. Review.

PMID:
29038487
11.

The Value of a Comparative Approach to Understand the Complex Interplay between Microbiota and Host Immunity.

Morella NM, Koskella B.

Front Immunol. 2017 Sep 14;8:1114. doi: 10.3389/fimmu.2017.01114. eCollection 2017.

12.

Phage therapy: An alternative to antibiotics in the age of multi-drug resistance.

Lin DM, Koskella B, Lin HC.

World J Gastrointest Pharmacol Ther. 2017 Aug 6;8(3):162-173. doi: 10.4292/wjgpt.v8.i3.162. Review.

13.

A signature of tree health? Shifts in the microbiome and the ecological drivers of horse chestnut bleeding canker disease.

Koskella B, Meaden S, Crowther WJ, Leimu R, Metcalf CJE.

New Phytol. 2017 Jul;215(2):737-746. doi: 10.1111/nph.14560. Epub 2017 Apr 18.

14.

Introduction: microbial local adaptation: insights from natural populations, genomics and experimental evolution.

Giraud T, Koskella B, Laine AL.

Mol Ecol. 2017 Apr;26(7):1703-1710. doi: 10.1111/mec.14091. No abstract available.

PMID:
28409900
15.

Adaptation of the pathogen, Pseudomonas syringae, during experimental evolution on a native vs. alternative host plant.

Meaden S, Koskella B.

Mol Ecol. 2017 Apr;26(7):1790-1801. doi: 10.1111/mec.14060. Epub 2017 Mar 13.

PMID:
28207977
16.

Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes.

Rihtman B, Meaden S, Clokie MR, Koskella B, Millard AD.

PeerJ. 2016 Jun 1;4:e2055. doi: 10.7717/peerj.2055. eCollection 2016.

17.

The effects of host age and spatial location on bacterial community composition in the English Oak tree (Quercus robur).

Meaden S, Metcalf CJE, Koskella B.

Environ Microbiol Rep. 2016 Oct;8(5):649-658. doi: 10.1111/1758-2229.12418. Epub 2016 Jun 3.

PMID:
27120417
18.

Understanding the ecology and evolution of host-parasite interactions across scales.

Penczykowski RM, Laine AL, Koskella B.

Evol Appl. 2015 Aug 20;9(1):37-52. doi: 10.1111/eva.12294. eCollection 2016 Jan. Review.

19.

Research highlights for issue 10: understanding complex lifecycles.

Koskella B.

Evol Appl. 2015 Dec;8(10):917-8. doi: 10.1111/eva.12340. Epub 2015 Nov 20. No abstract available.

20.

Research highlights for issue 7: the evolution of invasiveness.

Koskella B.

Evol Appl. 2015 Aug;8(7):633-4. doi: 10.1111/eva.12292. No abstract available.

21.

The evolution of bacterial resistance against bacteriophages in the horse chestnut phyllosphere is general across both space and time.

Koskella B, Parr N.

Philos Trans R Soc Lond B Biol Sci. 2015 Aug 19;370(1675). pii: 20140297. doi: 10.1098/rstb.2014.0297.

22.

Research highlights for issue 6: the CRISPR/Cas revolution.

Koskella B.

Evol Appl. 2015 Jul;8(6):525-6. doi: 10.1111/eva.12279. No abstract available.

23.

Thirteen challenges in modelling plant diseases.

Cunniffe NJ, Koskella B, Metcalf CJ, Parnell S, Gottwald TR, Gilligan CA.

Epidemics. 2015 Mar;10:6-10. doi: 10.1016/j.epidem.2014.06.002. Epub 2014 Jul 1.

24.

The cost of phage resistance in a plant pathogenic bacterium is context-dependent.

Meaden S, Paszkiewicz K, Koskella B.

Evolution. 2015 May;69(5):1321-8. doi: 10.1111/evo.12652. Epub 2015 Apr 27.

25.

Research highlights for issue 2: recent applications in molecular evolution.

Koskella B.

Evol Appl. 2015 Feb;8(2):119-20. doi: 10.1111/eva.12246. No abstract available.

26.

Friend and foe: factors influencing the movement of the bacterium Helicobacter pylori along the parasitism-mutualism continuum.

Lin D, Koskella B.

Evol Appl. 2015 Jan;8(1):9-22. doi: 10.1111/eva.12231. Epub 2014 Nov 20. Review.

27.

Evolutionary applications research highlight for issue 1.

Koskella B.

Evol Appl. 2015 Jan;8(1):1. doi: 10.1111/eva.12238. No abstract available.

28.

Evolutionary Applications research highlights for issue 9: the ever-evolving field of agriculture.

Koskella B.

Evol Appl. 2014 Dec;7(10):1159-60. doi: 10.1111/eva.12224. No abstract available.

29.

Research highlight for issue 8: disease evolution and ecology across space.

Koskella B.

Evol Appl. 2014 Sep;7(8):869-70. doi: 10.1111/eva.12201. No abstract available.

30.

Understanding Adaptation and Diversification: Insights from the Study of Microbial Experimental Evolution.

Koskella B.

Evolution. 2014 Nov 18. doi: 10.1111/evo.12564. [Epub ahead of print]

PMID:
25403561
31.

Bacteria-phage interactions in natural environments.

Díaz-Muñoz SL, Koskella B.

Adv Appl Microbiol. 2014;89:135-83. doi: 10.1016/B978-0-12-800259-9.00004-4. Review.

PMID:
25131402
32.

Research highlights for issue 6: the applicability of model system research.

Koskella B.

Evol Appl. 2014 Jun;7(6):607-8. doi: 10.1111/eva.12182. No abstract available.

33.

Bacteria-phage interactions across time and space: merging local adaptation and time-shift experiments to understand phage evolution.

Koskella B.

Am Nat. 2014 Aug;184 Suppl 1:S9-21. doi: 10.1086/676888. Epub 2014 Jul 8.

PMID:
25061680
34.

Interesting open questions in disease ecology and evolution.

Lively CM, de Roode JC, Duffy MA, Graham AL, Koskella B.

Am Nat. 2014 Aug;184 Suppl 1:S1-8. doi: 10.1086/677032. Epub 2014 Jul 8. No abstract available.

PMID:
25061674
35.

Research highlights for issue 5: the role of the microbiome in shaping evolution.

Koskella B.

Evol Appl. 2014 May;7(5):519-20. doi: 10.1111/eva.12167. No abstract available.

36.

Research highlights for issue 4: Predicting the evolutionary response of populations to climate change.

Koskella B.

Evol Appl. 2014 Apr;7(4):431-2. doi: 10.1111/eva.12158. No abstract available.

37.

Research highlights for issue 3.

Koskella B.

Evol Appl. 2014 Mar;7(3):337-8. doi: 10.1111/eva.12153. No abstract available.

38.

Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities.

Koskella B, Brockhurst MA.

FEMS Microbiol Rev. 2014 Sep;38(5):916-31. doi: 10.1111/1574-6976.12072. Epub 2014 Mar 27. Review.

39.

Exploring the risks of phage application in the environment.

Meaden S, Koskella B.

Front Microbiol. 2013 Nov 29;4:358. doi: 10.3389/fmicb.2013.00358. eCollection 2013. Review.

40.

Phage-mediated selection on microbiota of a long-lived host.

Koskella B.

Curr Biol. 2013 Jul 8;23(13):1256-60. doi: 10.1016/j.cub.2013.05.038. Epub 2013 Jun 27.

41.

Experimental coevolution of species interactions.

Brockhurst MA, Koskella B.

Trends Ecol Evol. 2013 Jun;28(6):367-75. doi: 10.1016/j.tree.2013.02.009. Epub 2013 Mar 20. Review.

PMID:
23523051
42.

Understanding bacteriophage specificity in natural microbial communities.

Koskella B, Meaden S.

Viruses. 2013 Mar 11;5(3):806-23. doi: 10.3390/v5030806. Review.

43.

The origin of specificity by means of natural selection: evolved and nonhost resistance in host-pathogen interactions.

Antonovics J, Boots M, Ebert D, Koskella B, Poss M, Sadd BM.

Evolution. 2013 Jan;67(1):1-9. doi: 10.1111/j.1558-5646.2012.01793.x. Epub 2012 Sep 24.

PMID:
23289557
44.

The costs of evolving resistance in heterogeneous parasite environments.

Koskella B, Lin DM, Buckling A, Thompson JN.

Proc Biol Sci. 2012 May 22;279(1735):1896-903. doi: 10.1098/rspb.2011.2259. Epub 2011 Dec 14.

45.

Using experimental evolution to explore natural patterns between bacterial motility and resistance to bacteriophages.

Koskella B, Taylor TB, Bates J, Buckling A.

ISME J. 2011 Nov;5(11):1809-17. doi: 10.1038/ismej.2011.47. Epub 2011 Apr 21.

46.

Local biotic environment shapes the spatial scale of bacteriophage adaptation to bacteria.

Koskella B, Thompson JN, Preston GM, Buckling A.

Am Nat. 2011 Apr;177(4):440-51. doi: 10.1086/658991.

PMID:
21460566
47.

Evidence for negative frequency-dependent selection during experimental coevolution of a freshwater snail and a sterilizing trematode.

Koskella B, Lively CM.

Evolution. 2009 Sep;63(9):2213-21. doi: 10.1111/j.1558-5646.2009.00711.x. Epub 2009 Apr 13.

PMID:
19473396
48.

Hybrid fitness in a locally adapted parasite.

Dybdahl MF, Jokela J, Delph LF, Koskella B, Lively CM.

Am Nat. 2008 Dec;172(6):772-82. doi: 10.1086/592866.

PMID:
18950274
49.

A synthesis of experimental work on parasite local adaptation.

Greischar MA, Koskella B.

Ecol Lett. 2007 May;10(5):418-34. Review.

PMID:
17498141
50.

Advice of the rose: experimental coevolution of a trematode parasite and its snail host.

Koskella B, Lively CM.

Evolution. 2007 Jan;61(1):152-9.

PMID:
17300434

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