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Items: 1 to 50 of 231

1.

The microRNAs miR-302b and miR-372 regulate mitochondrial metabolism via the SLC25A12 transporter, which controls MAVS-mediated antiviral innate immunity.

Yasukawa K, Kinoshita D, Yaku K, Nakagawa T, Koshiba T.

J Biol Chem. 2019 Nov 25. pii: jbc.RA119.010511. doi: 10.1074/jbc.RA119.010511. [Epub ahead of print]

2.

Altered lignocellulose chemical structure and molecular assembly in CINNAMYL ALCOHOL DEHYDROGENASE-deficient rice.

Martin AF, Tobimatsu Y, Kusumi R, Matsumoto N, Miyamoto T, Lam PY, Yamamura M, Koshiba T, Sakamoto M, Umezawa T.

Sci Rep. 2019 Nov 20;9(1):17153. doi: 10.1038/s41598-019-53156-8.

3.

Mass spectrometry-based methods for analyzing the mitochondrial interactome in mammalian cells.

Koshiba T, Kosako H.

J Biochem. 2019 Oct 24. pii: mvz090. doi: 10.1093/jb/mvz090. [Epub ahead of print]

PMID:
31647556
4.

Influenza A virus M2 protein triggers mitochondrial DNA-mediated antiviral immune responses.

Moriyama M, Koshiba T, Ichinohe T.

Nat Commun. 2019 Oct 11;10(1):4624. doi: 10.1038/s41467-019-12632-5.

5.

Structural Basis of Mitochondrial Scaffolds by Prohibitin Complexes: Insight into a Role of the Coiled-Coil Region.

Yoshinaka T, Kosako H, Yoshizumi T, Furukawa R, Hirano Y, Kuge O, Tamada T, Koshiba T.

iScience. 2019 Sep 27;19:1065-1078. doi: 10.1016/j.isci.2019.08.056. Epub 2019 Sep 3.

6.

Low-fluence blue light-induced phosphorylation of Zmphot1 mediates the first positive phototropism.

Suzuki H, Koshiba T, Fujita C, Yamauchi Y, Kimura T, Isobe T, Sakai T, Taoka M, Okamoto T.

J Exp Bot. 2019 Oct 24;70(20):5929-5941. doi: 10.1093/jxb/erz344.

7.

Potential Risk of Virus Carryover by Fabrics of Personal Protective Gowns.

Katoh I, Tanabe F, Kasai H, Moriishi K, Shimasaki N, Shinohara K, Uchida Y, Koshiba T, Arakawa S, Morimoto M.

Front Public Health. 2019 May 22;7:121. doi: 10.3389/fpubh.2019.00121. eCollection 2019.

8.

Radiologic features of pneumonitis associated with nivolumab in non-small-cell lung cancer and malignant melanoma.

Baba T, Sakai F, Kato T, Kusumoto M, Kenmotsu H, Sugiura H, Tominaga J, Oikado K, Sata M, Endo M, Yanagawa N, Sasaki S, Iwasawa T, Saito Y, Fujiwara Y, Ohe Y, Yamazaki N, Sakamoto T, Koshiba T, Kuwano K.

Future Oncol. 2019 Jun;15(16):1911-1920. doi: 10.2217/fon-2019-0102. Epub 2019 Apr 25.

9.

Identification of Nitrogen-Fixing Bradyrhizobium Associated With Roots of Field-Grown Sorghum by Metagenome and Proteome Analyses.

Hara S, Morikawa T, Wasai S, Kasahara Y, Koshiba T, Yamazaki K, Fujiwara T, Tokunaga T, Minamisawa K.

Front Microbiol. 2019 Mar 12;10:407. doi: 10.3389/fmicb.2019.00407. eCollection 2019.

10.

Immunolocalization of IAA Using an Anti-IAA-C-Antibody Raised Against Carboxyl-Linked IAA.

Nishimura T, Koshiba T.

Methods Mol Biol. 2019;1924:165-172. doi: 10.1007/978-1-4939-9015-3_13.

PMID:
30694474
11.

Two Conserved Amino Acids within the NSs of Severe Fever with Thrombocytopenia Syndrome Phlebovirus Are Essential for Anti-interferon Activity.

Moriyama M, Igarashi M, Koshiba T, Irie T, Takada A, Ichinohe T.

J Virol. 2018 Sep 12;92(19). pii: e00706-18. doi: 10.1128/JVI.00706-18. Print 2018 Oct 1.

12.

Effectiveness of a cognitive behavioural therapy-based anxiety prevention programme at an elementary school in Japan: a quasi-experimental study.

Urao Y, Yoshida M, Koshiba T, Sato Y, Ishikawa SI, Shimizu E.

Child Adolesc Psychiatry Ment Health. 2018 Jun 19;12:33. doi: 10.1186/s13034-018-0240-5. eCollection 2018.

13.

Downregulation of p-COUMAROYL ESTER 3-HYDROXYLASE in rice leads to altered cell wall structures and improves biomass saccharification.

Takeda Y, Tobimatsu Y, Karlen SD, Koshiba T, Suzuki S, Yamamura M, Murakami S, Mukai M, Hattori T, Osakabe K, Ralph J, Sakamoto M, Umezawa T.

Plant J. 2018 Jun 11. doi: 10.1111/tpj.13988. [Epub ahead of print]

14.

Expression of RSOsPR10 in rice roots is antagonistically regulated by jasmonate/ethylene and salicylic acid via the activator OsERF87 and the repressor OsWRKY76, respectively.

Yamamoto T, Yoshida Y, Nakajima K, Tominaga M, Gyohda A, Suzuki H, Okamoto T, Nishimura T, Yokotani N, Minami E, Nishizawa Y, Miyamoto K, Yamane H, Okada K, Koshiba T.

Plant Direct. 2018 Mar 30;2(3):e00049. doi: 10.1002/pld3.49. eCollection 2018 Mar.

15.

Herpes Simplex Virus 1 VP22 Inhibits AIM2-Dependent Inflammasome Activation to Enable Efficient Viral Replication.

Maruzuru Y, Ichinohe T, Sato R, Miyake K, Okano T, Suzuki T, Koshiba T, Koyanagi N, Tsuda S, Watanabe M, Arii J, Kato A, Kawaguchi Y.

Cell Host Microbe. 2018 Feb 14;23(2):254-265.e7. doi: 10.1016/j.chom.2017.12.014.

16.

Yucasin DF, a potent and persistent inhibitor of auxin biosynthesis in plants.

Tsugafune S, Mashiguchi K, Fukui K, Takebayashi Y, Nishimura T, Sakai T, Shimada Y, Kasahara H, Koshiba T, Hayashi KI.

Sci Rep. 2017 Oct 25;7(1):13992. doi: 10.1038/s41598-017-14332-w.

17.

Physical implementation of oblivious transfer using optical correlated randomness.

Ito T, Koizumi H, Suzuki N, Kakesu I, Iwakawa K, Uchida A, Koshiba T, Muramatsu J, Yoshimura K, Inubushi M, Davis P.

Sci Rep. 2017 Aug 16;7(1):8444. doi: 10.1038/s41598-017-08229-x.

18.

RLR-mediated antiviral innate immunity requires oxidative phosphorylation activity.

Yoshizumi T, Imamura H, Taku T, Kuroki T, Kawaguchi A, Ishikawa K, Nakada K, Koshiba T.

Sci Rep. 2017 Jul 14;7(1):5379. doi: 10.1038/s41598-017-05808-w.

19.

Regulation of CONIFERALDEHYDE 5-HYDROXYLASE expression to modulate cell wall lignin structure in rice.

Takeda Y, Koshiba T, Tobimatsu Y, Suzuki S, Murakami S, Yamamura M, Rahman MM, Takano T, Hattori T, Sakamoto M, Umezawa T.

Planta. 2017 Aug;246(2):337-349. doi: 10.1007/s00425-017-2692-x. Epub 2017 Apr 18.

PMID:
28421330
20.

Walking through Apertures in Individuals with Stroke.

Muroi D, Hiroi Y, Koshiba T, Suzuki Y, Kawaki M, Higuchi T.

PLoS One. 2017 Jan 19;12(1):e0170119. doi: 10.1371/journal.pone.0170119. eCollection 2017.

21.

MYB-mediated upregulation of lignin biosynthesis in Oryza sativa towards biomass refinery.

Koshiba T, Yamamoto N, Tobimatsu Y, Yamamura M, Suzuki S, Hattori T, Mukai M, Noda S, Shibata D, Sakamoto M, Umezawa T.

Plant Biotechnol (Tokyo). 2017;34(1):7-15. doi: 10.5511/plantbiotechnology.16.1201a. Epub 2017 Mar 17.

22.

AtSWEET13 and AtSWEET14 regulate gibberellin-mediated physiological processes.

Kanno Y, Oikawa T, Chiba Y, Ishimaru Y, Shimizu T, Sano N, Koshiba T, Kamiya Y, Ueda M, Seo M.

Nat Commun. 2016 Oct 26;7:13245. doi: 10.1038/ncomms13245.

23.

Interaction between Viral Proteins and Mitochondria.

Yoshizumi T, Yasukawa K, Koshiba T.

Fukuoka Igaku Zasshi. 2016 Aug;107(8):148-54. Review. Japanese.

PMID:
29227063
24.

Root cap-dependent gravitropic U-turn of maize root requires light-induced auxin biosynthesis via the YUC pathway in the root apex.

Suzuki H, Yokawa K, Nakano S, Yoshida Y, Fabrissin I, Okamoto T, Baluška F, Koshiba T.

J Exp Bot. 2016 Aug;67(15):4581-91. doi: 10.1093/jxb/erw232. Epub 2016 Jun 15.

25.

2016 Comprehensive Update of the Banff Working Group on Liver Allograft Pathology: Introduction of Antibody-Mediated Rejection.

Demetris AJ, Bellamy C, Hübscher SG, O'Leary J, Randhawa PS, Feng S, Neil D, Colvin RB, McCaughan G, Fung JJ, Del Bello A, Reinholt FP, Haga H, Adeyi O, Czaja AJ, Schiano T, Fiel MI, Smith ML, Sebagh M, Tanigawa RY, Yilmaz F, Alexander G, Baiocchi L, Balasubramanian M, Batal I, Bhan AK, Bucuvalas J, Cerski CTS, Charlotte F, de Vera ME, ElMonayeri M, Fontes P, Furth EE, Gouw ASH, Hafezi-Bakhtiari S, Hart J, Honsova E, Ismail W, Itoh T, Jhala NC, Khettry U, Klintmalm GB, Knechtle S, Koshiba T, Kozlowski T, Lassman CR, Lerut J, Levitsky J, Licini L, Liotta R, Mazariegos G, Minervini MI, Misdraji J, Mohanakumar T, Mölne J, Nasser I, Neuberger J, O'Neil M, Pappo O, Petrovic L, Ruiz P, Sağol Ö, Sanchez Fueyo A, Sasatomi E, Shaked A, Shiller M, Shimizu T, Sis B, Sonzogni A, Stevenson HL, Thung SN, Tisone G, Tsamandas AC, Wernerson A, Wu T, Zeevi A, Zen Y.

Am J Transplant. 2016 Oct;16(10):2816-2835. doi: 10.1111/ajt.13909. Epub 2016 Jul 14.

26.

Correction: Crosslinking of a Peritrophic Matrix Protein Protects Gut Epithelia from Bacterial Exotoxins.

Shibata T, Maki K, Hadano J, Fujikawa T, Kitazaki K, Koshiba T, Kawabata SI.

PLoS Pathog. 2016 Jun 1;12(6):e1005670. doi: 10.1371/journal.ppat.1005670. eCollection 2016 Jun.

27.

Utility of CD127 combined with FOXP3 for identification of operational tolerance after liver transplantation.

Nafady-Hego H, Li Y, Ohe H, Elgendy H, Zhao X, Sakaguchi S, Bishop GA, Koshiba T.

Transpl Immunol. 2016 May;36:1-8. doi: 10.1016/j.trim.2016.04.005. Epub 2016 Apr 20.

PMID:
27105585
28.

[An Elderly Patient with Local Recurrence of Gastric Cancer Responding Completely to S-1 Monotherapy].

Kusama T, Yamagami K, Hasegawa M, Sone N, Kokado Y, Koshiba T, Ichikawa K.

Gan To Kagaku Ryoho. 2016 Feb;43(2):247-50. Review. Japanese.

PMID:
27067692
29.

The Leuven Immunomodulatory Protocol Promotes T-Regulatory Cells and Substantially Prolongs Survival After First Intestinal Transplantation.

Ceulemans LJ, Braza F, Monbaliu D, Jochmans I, De Hertogh G, Du Plessis J, Emonds MP, Kitade H, Kawai M, Li Y, Zhao X, Koshiba T, Sprangers B, Brouard S, Waer M, Pirenne J.

Am J Transplant. 2016 Oct;16(10):2973-2985. doi: 10.1111/ajt.13815. Epub 2016 May 12.

30.

Evaluating the Imbalance Between Increasing Hemodialysis Patients and Medical Staff Shortage After the Great East Japan Earthquake: Report From a Hemodialysis Center Near the Fukushima Nuclear Power Plants.

Koshiba T, Nishiuchi T, Akaihata H, Haga N, Kojima Y, Kubo H, Kasahara M, Hayashi M.

Ther Apher Dial. 2016 Apr;20(2):127-34. doi: 10.1111/1744-9987.12393. Epub 2016 Mar 2.

PMID:
26935477
31.

The RNA- and TRIM25-Binding Domains of Influenza Virus NS1 Protein Are Essential for Suppression of NLRP3 Inflammasome-Mediated Interleukin-1β Secretion.

Moriyama M, Chen IY, Kawaguchi A, Koshiba T, Nagata K, Takeyama H, Hasegawa H, Ichinohe T.

J Virol. 2016 Mar 28;90(8):4105-4114. doi: 10.1128/JVI.00120-16. Print 2016 Apr.

32.

[Interaction between an Influenza A viral protein PB1-F2 and mitochondria].

Yoshizumi T, Koshiba T.

Seikagaku. 2015 Feb;87(1):144-8. Review. Japanese. No abstract available.

PMID:
26571570
33.

Crosslinking of a Peritrophic Matrix Protein Protects Gut Epithelia from Bacterial Exotoxins.

Shibata T, Maki K, Hadano J, Fujikawa T, Kitazaki K, Koshiba T, Kawabata S.

PLoS Pathog. 2015 Oct 27;11(10):e1005244. doi: 10.1371/journal.ppat.1005244. eCollection 2015 Oct. Erratum in: PLoS Pathog. 2016 Jun;12(6):e1005670.

34.

Factor B Is the Second Lipopolysaccharide-binding Protease Zymogen in the Horseshoe Crab Coagulation Cascade.

Kobayashi Y, Takahashi T, Shibata T, Ikeda S, Koshiba T, Mizumura H, Oda T, Kawabata S.

J Biol Chem. 2015 Jul 31;290(31):19379-86. doi: 10.1074/jbc.M115.653196. Epub 2015 Jun 24.

35.

The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.

Noda S, Koshiba T, Hattori T, Yamaguchi M, Suzuki S, Umezawa T.

Planta. 2015 Sep;242(3):589-600. doi: 10.1007/s00425-015-2343-z. Epub 2015 Jun 13.

PMID:
26070439
36.

Identification of Arabidopsis thaliana NRT1/PTR FAMILY (NPF) proteins capable of transporting plant hormones.

Chiba Y, Shimizu T, Miyakawa S, Kanno Y, Koshiba T, Kamiya Y, Seo M.

J Plant Res. 2015 Jul;128(4):679-86. doi: 10.1007/s10265-015-0710-2. Epub 2015 Mar 24.

PMID:
25801271
37.

Live Single-Cell Plant Hormone Analysis by Video-Mass Spectrometry.

Shimizu T, Miyakawa S, Esaki T, Mizuno H, Masujima T, Koshiba T, Seo M.

Plant Cell Physiol. 2015 Jul;56(7):1287-96. doi: 10.1093/pcp/pcv042. Epub 2015 Mar 9.

PMID:
25759328
38.

Protein-protein interactions of mitochondrial-associated protein via bioluminescence resonance energy transfer.

Koshiba T.

Biophys Physicobiol. 2015 Sep 9;12:31-5. doi: 10.2142/biophysico.12.0_31. eCollection 2015. Review.

39.

Influenza A virus protein PB1-F2 translocates into mitochondria via Tom40 channels and impairs innate immunity.

Yoshizumi T, Ichinohe T, Sasaki O, Otera H, Kawabata S, Mihara K, Koshiba T.

Nat Commun. 2014 Aug 20;5:4713. doi: 10.1038/ncomms5713.

PMID:
25140902
40.

Loss of Miro1-directed mitochondrial movement results in a novel murine model for neuron disease.

Nguyen TT, Oh SS, Weaver D, Lewandowska A, Maxfield D, Schuler MH, Smith NK, Macfarlane J, Saunders G, Palmer CA, Debattisti V, Koshiba T, Pulst S, Feldman EL, Hajnóczky G, Shaw JM.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):E3631-40. doi: 10.1073/pnas.1402449111. Epub 2014 Aug 18.

41.

The N-terminal Arg residue is essential for autocatalytic activation of a lipopolysaccharide-responsive protease zymogen.

Kobayashi Y, Shiga T, Shibata T, Sako M, Maenaka K, Koshiba T, Mizumura H, Oda T, Kawabata S.

J Biol Chem. 2014 Sep 12;289(37):25987-95. doi: 10.1074/jbc.M114.586933. Epub 2014 Jul 30.

42.

Light-dependent control of redox balance and auxin biosynthesis in plants.

Yokawa K, Koshiba T, Baluška F.

Plant Signal Behav. 2014 Jun 13;9. pii: e29522. [Epub ahead of print]

43.

Blue-light regulation of ZmPHOT1 and ZmPHOT2 gene expression and the possible involvement of Zmphot1 in phototropism in maize coleoptiles.

Suzuki H, Okamoto A, Kojima A, Nishimura T, Takano M, Kagawa T, Kadota A, Kanegae T, Koshiba T.

Planta. 2014 Aug;240(2):251-61. doi: 10.1007/s00425-014-2082-6. Epub 2014 May 11.

PMID:
24817587
44.

A 2,4-dichlorophenoxyacetic acid analog screened using a maize coleoptile system potentially inhibits indole-3-acetic acid influx in Arabidopsis thaliana.

Suzuki H, Matano N, Nishimura T, Koshiba T.

Plant Signal Behav. 2014 May 5;9. pii: e29077. [Epub ahead of print]

45.

The rice FISH BONE gene encodes a tryptophan aminotransferase, which affects pleiotropic auxin-related processes.

Yoshikawa T, Ito M, Sumikura T, Nakayama A, Nishimura T, Kitano H, Yamaguchi I, Koshiba T, Hibara K, Nagato Y, Itoh J.

Plant J. 2014 Jun;78(6):927-36. doi: 10.1111/tpj.12517. Epub 2014 Jun 5.

46.

Yucasin is a potent inhibitor of YUCCA, a key enzyme in auxin biosynthesis.

Nishimura T, Hayashi K, Suzuki H, Gyohda A, Takaoka C, Sakaguchi Y, Matsumoto S, Kasahara H, Sakai T, Kato J, Kamiya Y, Koshiba T.

Plant J. 2014 Feb;77(3):352-66. doi: 10.1111/tpj.12399. Epub 2014 Jan 16. Erratum in: Plant J. 2015 Feb;81(4):649.

47.

NAL1 allele from a rice landrace greatly increases yield in modern indica cultivars.

Fujita D, Trijatmiko KR, Tagle AG, Sapasap MV, Koide Y, Sasaki K, Tsakirpaloglou N, Gannaban RB, Nishimura T, Yanagihara S, Fukuta Y, Koshiba T, Slamet-Loedin IH, Ishimaru T, Kobayashi N.

Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20431-6. doi: 10.1073/pnas.1310790110. Epub 2013 Dec 2.

48.

Mitochondrial protein mitofusin 2 is required for NLRP3 inflammasome activation after RNA virus infection.

Ichinohe T, Yamazaki T, Koshiba T, Yanagi Y.

Proc Natl Acad Sci U S A. 2013 Oct 29;110(44):17963-8. doi: 10.1073/pnas.1312571110. Epub 2013 Oct 14.

49.

Transglutaminase-catalyzed protein-protein cross-linking suppresses the activity of the NF-κB-like transcription factor relish.

Shibata T, Sekihara S, Fujikawa T, Miyaji R, Maki K, Ishihara T, Koshiba T, Kawabata S.

Sci Signal. 2013 Jul 23;6(285):ra61. doi: 10.1126/scisignal.2003970.

PMID:
23882120
50.

[Mitochondria and antiviral immunity].

Koshiba T.

Seikagaku. 2013 May;85(5):336-44. Review. Japanese. No abstract available.

PMID:
23819391

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