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Items: 20

1.

Interdependence between EGFR and Phosphatases Spatially Established by Vesicular Dynamics Generates a Growth Factor Sensing and Responding Network.

Stanoev A, Mhamane A, Schuermann KC, Grecco HE, Stallaert W, Baumdick M, Brüggemann Y, Joshi MS, Roda-Navarro P, Fengler S, Stockert R, Roßmannek L, Luig J, Koseska A, Bastiaens PIH.

Cell Syst. 2018 Sep 26;7(3):295-309.e11. doi: 10.1016/j.cels.2018.06.006. Epub 2018 Aug 22.

2.

Cell signaling as a cognitive process.

Koseska A, Bastiaens PI.

EMBO J. 2017 Mar 1;36(5):568-582. doi: 10.15252/embj.201695383. Epub 2017 Jan 30. Review.

3.

Restoration of rhythmicity in diffusively coupled dynamical networks.

Zou W, Senthilkumar DV, Nagao R, Kiss IZ, Tang Y, Koseska A, Duan J, Kurths J.

Nat Commun. 2015 Jul 15;6:7709. doi: 10.1038/ncomms8709.

4.

Generalizing the transition from amplitude to oscillation death in coupled oscillators.

Zou W, Senthilkumar DV, Koseska A, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Nov;88(5):050901. Epub 2013 Nov 7.

PMID:
24329205
5.

Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation.

Winck FV, Arvidsson S, Riaño-Pachón DM, Hempel S, Koseska A, Nikoloski Z, Urbina Gomez DA, Rupprecht J, Mueller-Roeber B.

PLoS One. 2013 Nov 1;8(11):e79909. doi: 10.1371/journal.pone.0079909. eCollection 2013. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/63d1c5f9-82c8-406b-b60e-b7d9ecba9408. Vischi Winck, Flavia [corrected to Winck, Flavia Vischi].

6.

Transition from amplitude to oscillation death via Turing bifurcation.

Koseska A, Volkov E, Kurths J.

Phys Rev Lett. 2013 Jul 12;111(2):024103. Epub 2013 Jul 10.

PMID:
23889406
7.

Dimensionality reduction of bistable biological systems.

Zakharova A, Nikoloski Z, Koseska A.

Bull Math Biol. 2013 Mar;75(3):373-92. doi: 10.1007/s11538-013-9807-8. Epub 2013 Feb 8.

PMID:
23392578
8.

Inner composition alignment for inferring directed networks from short time series.

Hempel S, Koseska A, Kurths J, Nikoloski Z.

Phys Rev Lett. 2011 Jul 29;107(5):054101. Epub 2011 Jul 26.

PMID:
21867072
9.

Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study.

Hempel S, Koseska A, Nikoloski Z, Kurths J.

BMC Bioinformatics. 2011 Jul 19;12:292. doi: 10.1186/1471-2105-12-292.

10.

Analysing dynamical behavior of cellular networks via stochastic bifurcations.

Zakharova A, Kurths J, Vadivasova T, Koseska A.

PLoS One. 2011;6(5):e19696. doi: 10.1371/journal.pone.0019696. Epub 2011 May 25.

11.

Topological structures enhance the presence of dynamical regimes in synthetic networks.

Koseska A, Kurths J.

Chaos. 2010 Dec;20(4):045111. doi: 10.1063/1.3515200.

PMID:
21198123
12.

Spatiotemporal dynamics of the Calvin cycle: multistationarity and symmetry breaking instabilities.

Grimbs S, Arnold A, Koseska A, Kurths J, Selbig J, Nikoloski Z.

Biosystems. 2011 Feb;103(2):212-23. doi: 10.1016/j.biosystems.2010.10.015. Epub 2010 Nov 12.

PMID:
21075168
13.

Parameter mismatches and oscillation death in coupled oscillators.

Koseska A, Volkov E, Kurths J.

Chaos. 2010 Jun;20(2):023132. doi: 10.1063/1.3456937.

PMID:
20590328
14.

Stochastic bifurcations and coherencelike resonance in a self-sustained bistable noisy oscillator.

Zakharova A, Vadivasova T, Anishchenko V, Koseska A, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jan;81(1 Pt 1):011106. Epub 2010 Jan 6.

PMID:
20365322
15.

Cooperative differentiation through clustering in multicellular populations.

Koseska A, Ullner E, Volkov E, Kurths J, García-Ojalvo J.

J Theor Biol. 2010 Mar 21;263(2):189-202. doi: 10.1016/j.jtbi.2009.11.007. Epub 2009 Nov 22.

PMID:
19932703
16.

Timing cellular decision making under noise via cell-cell communication.

Koseska A, Zaikin A, Kurths J, García-Ojalvo J.

PLoS One. 2009;4(3):e4872. doi: 10.1371/journal.pone.0004872. Epub 2009 Mar 13.

17.

Multistability of synthetic genetic networks with repressive cell-to-cell communication.

Ullner E, Koseska A, Kurths J, Volkov E, Kantz H, García-Ojalvo J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Sep;78(3 Pt 1):031904. Epub 2008 Sep 5.

PMID:
18851062
18.

Quantized cycling time in artificial gene networks induced by noise and intercell communication.

Koseska A, Volkov E, Zaikin A, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Aug;76(2 Pt 1):020901. Epub 2007 Aug 23.

PMID:
17929999
19.

Stochastic suppression of gene expression oscillators under intercell coupling.

Koseska A, Zaikin A, García-Ojalvo J, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031917. Epub 2007 Mar 30.

PMID:
17500736
20.

Inherent multistability in arrays of autoinducer coupled genetic oscillators.

Koseska A, Volkov E, Zaikin A, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031916. Epub 2007 Mar 30.

PMID:
17500735

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