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Items: 1 to 50 of 174

1.

A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions.

Wallace RJ, Sasson G, Garnsworthy PC, Tapio I, Gregson E, Bani P, Huhtanen P, Bayat AR, Strozzi F, Biscarini F, Snelling TJ, Saunders N, Potterton SL, Craigon J, Minuti A, Trevisi E, Callegari ML, Cappelli FP, Cabezas-Garcia EH, Vilkki J, Pinares-Patino C, Fliegerová KO, Mrázek J, Sechovcová H, Kopečný J, Bonin A, Boyer F, Taberlet P, Kokou F, Halperin E, Williams JL, Shingfield KJ, Mizrahi I.

Sci Adv. 2019 Jul 3;5(7):eaav8391. doi: 10.1126/sciadv.aav8391. eCollection 2019 Jul.

2.

Comparison of enzymatic activities and proteomic profiles of Butyrivibrio fibrisolvens grown on different carbon sources.

Sechovcová H, Kulhavá L, Fliegerová K, Trundová M, Morais D, Mrázek J, Kopečný J.

Proteome Sci. 2019 Jun 1;17:2. doi: 10.1186/s12953-019-0150-3. eCollection 2019.

3.

A comparison of methanogens of different regions of the equine hindgut.

Murru F, Fliegerova K, Mura E, Mrázek J, Kopečný J, Moniello G.

Anaerobe. 2018 Dec;54:104-110. doi: 10.1016/j.anaerobe.2018.08.009. Epub 2018 Aug 22.

PMID:
30142409
4.

Analysis of the rumen bacterial diversity of goats during shift from forage to concentrate diet.

Grilli DJ, Fliegerová K, Kopečný J, Lama SP, Egea V, Sohaefer N, Pereyra C, Ruiz MS, Sosa MA, Arenas GN, Mrázek J.

Anaerobe. 2016 Dec;42:17-26. doi: 10.1016/j.anaerobe.2016.07.002. Epub 2016 Jul 12.

PMID:
27417742
6.

Reclassification of Eubacterium rectale (Hauduroy et al. 1937) Prévot 1938 in a new genus Agathobacter gen. nov. as Agathobacter rectalis comb. nov., and description of Agathobacter ruminis sp. nov., isolated from the rumen contents of sheep and cows.

Rosero JA, Killer J, Sechovcová H, Mrázek J, Benada O, Fliegerová K, Havlík J, Kopečný J.

Int J Syst Evol Microbiol. 2016 Feb;66(2):768-773. doi: 10.1099/ijsem.0.000788. Epub 2015 Nov 30.

PMID:
26619944
7.

Identification of GH10 xylanases in strains 2 and Mz5 of Pseudobutyrivibrio xylanivorans.

Grilli DJ, Kopečný J, Mrázek J, Marinšek-Logar R, Paez Lama S, Escudero MS, Arenas GN.

Folia Microbiol (Praha). 2014 Nov;59(6):507-14. doi: 10.1007/s12223-014-0329-z. Epub 2014 Jun 20.

PMID:
24942109
8.

Lactobacillus rodentium sp. nov., from the digestive tract of wild rodents.

Killer J, Havlík J, Vlková E, Rada V, Pechar R, Benada O, Kopečný J, Kofroňová O, Sechovcová H.

Int J Syst Evol Microbiol. 2014 May;64(Pt 5):1526-33. doi: 10.1099/ijs.0.054924-0. Epub 2014 Jan 29.

PMID:
24478214
9.

Reclassification of Bifidobacterium stercoris Kim et al. 2010 as a later heterotypic synonym of Bifidobacterium adolescentis.

Killer J, Sedláček I, Rada V, Havlík J, Kopečný J.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4350-3. doi: 10.1099/ijs.0.054957-0.

PMID:
24187022
10.

Vagococcus entomophilus sp. nov., from the digestive tract of a wasp (Vespula vulgaris).

Killer J, Švec P, Sedlácek I, Cernohlávková J, Benada O, Hroncová Z, Havlík J, Vlková E, Rada V, Kopecny J, Kofronová O.

Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):731-7. doi: 10.1099/ijs.0.054940-0. Epub 2013 Oct 30.

PMID:
24174220
11.

Effect of DNA extraction and sample preservation method on rumen bacterial population.

Fliegerova K, Tapio I, Bonin A, Mrazek J, Callegari ML, Bani P, Bayat A, Vilkki J, Kopečný J, Shingfield KJ, Boyer F, Coissac E, Taberlet P, Wallace RJ.

Anaerobe. 2014 Oct;29:80-4. doi: 10.1016/j.anaerobe.2013.09.015. Epub 2013 Oct 12.

PMID:
24125910
12.

Alloscardovia macacae sp. nov., isolated from the milk of a macaque (Macaca mulatta), emended description of the genus Alloscardovia and proposal of Alloscardovia criceti comb. nov.

Killer J, Rocková Š, Vlková E, Rada V, Havlík J, Kopecny J, Bunesová V, Benada O, Kofronová O, Pechar R, Profousová I.

Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4439-46. doi: 10.1099/ijs.0.051326-0. Epub 2013 Aug 1.

PMID:
23907220
13.

Altered gut microbiota promotes colitis-associated cancer in IL-1 receptor-associated kinase M-deficient mice.

Klimesova K, Kverka M, Zakostelska Z, Hudcovic T, Hrncir T, Stepankova R, Rossmann P, Ridl J, Kostovcik M, Mrazek J, Kopecny J, Kobayashi KS, Tlaskalova-Hogenova H.

Inflamm Bowel Dis. 2013 May;19(6):1266-77. doi: 10.1097/MIB.0b013e318281330a.

14.

Pseudoscardovia suis gen. nov., sp. nov., a new member of the family Bifidobacteriaceae isolated from the digestive tract of wild pigs (Sus scrofa).

Killer J, Mrázek J, Bunešová V, Havlík J, Koppová I, Benada O, Rada V, Kopečný J, Vlková E.

Syst Appl Microbiol. 2013 Feb;36(1):11-6. doi: 10.1016/j.syapm.2012.09.001. Epub 2012 Nov 2.

PMID:
23122702
15.

Evaluation of different storage methods to characterize the fecal bacterial communities of captive western lowland gorillas (Gorilla gorilla gorilla).

Vlčková K, Mrázek J, Kopečný J, Petrželková KJ.

J Microbiol Methods. 2012 Oct;91(1):45-51. doi: 10.1016/j.mimet.2012.07.015. Epub 2012 Jul 22.

PMID:
22828127
16.

PCR detection of uncultured rumen bacteria.

Rosero JA, Strosová L, Mrázek J, Fliegerová K, Kopečný J.

Folia Microbiol (Praha). 2012 Jul;57(4):325-30. doi: 10.1007/s12223-012-0135-4. Epub 2012 Apr 14.

PMID:
22528308
17.

Lysate of probiotic Lactobacillus casei DN-114 001 ameliorates colitis by strengthening the gut barrier function and changing the gut microenvironment.

Zakostelska Z, Kverka M, Klimesova K, Rossmann P, Mrazek J, Kopecny J, Hornova M, Srutkova D, Hudcovic T, Ridl J, Tlaskalova-Hogenova H.

PLoS One. 2011;6(11):e27961. doi: 10.1371/journal.pone.0027961. Epub 2011 Nov 22.

18.

Characterization of bifidobacteria suitable for probiotic use in calves.

Bunešová V, Domig KJ, Killer J, Vlková E, Kopečný J, Mrázek J, Ročková S, Rada V.

Anaerobe. 2012 Feb;18(1):166-8. doi: 10.1016/j.anaerobe.2011.09.008. Epub 2011 Oct 1.

PMID:
21986032
19.

Oral administration of Parabacteroides distasonis antigens attenuates experimental murine colitis through modulation of immunity and microbiota composition.

Kverka M, Zakostelska Z, Klimesova K, Sokol D, Hudcovic T, Hrncir T, Rossmann P, Mrazek J, Kopecny J, Verdu EF, Tlaskalova-Hogenova H.

Clin Exp Immunol. 2011 Feb;163(2):250-9. doi: 10.1111/j.1365-2249.2010.04286.x. Epub 2010 Nov 19.

20.

Bombiscardovia coagulans gen. nov., sp. nov., a new member of the family Bifidobacteriaceae isolated from the digestive tract of bumblebees.

Killer J, Kopečný J, Mrázek J, Havlík J, Koppová I, Benada O, Rada V, Kofroňová O.

Syst Appl Microbiol. 2010 Nov;33(7):359-66. doi: 10.1016/j.syapm.2010.08.002. Epub 2010 Oct 14.

PMID:
20950979
21.

Survival of bifidobacteria administered to calves.

Vlková E, Grmanová M, Killer J, Mrázek J, Kopecný J, Bunesová V, Rada V.

Folia Microbiol (Praha). 2010 Jul;55(4):390-2. doi: 10.1007/s12223-010-0066-x. Epub 2010 Aug 3.

PMID:
20680579
22.

PCR-DGGE-based study of fecal microbial stability during the long-term chitosan supplementation of humans.

Mrázek J, Koppová I, Kopecný J, Simůnek J, Fliegerová K.

Folia Microbiol (Praha). 2010 Jul;55(4):352-8. doi: 10.1007/s12223-010-0057-y. Epub 2010 Aug 3.

PMID:
20680570
23.

PCR-DGGE analysis of bacterial population attached to the bovine rumen wall.

Lukás F, Simůnek J, Mrázek J, Kopecný J.

Folia Microbiol (Praha). 2010 Jul;55(4):345-8. doi: 10.1007/s12223-010-0055-0. Epub 2010 Aug 3.

PMID:
20680568
24.

The presence of bifidobacteria in social insects, fish and reptiles.

Kopecný J, Mrázek J, Killer J.

Folia Microbiol (Praha). 2010 Jul;55(4):336-9. doi: 10.1007/s12223-010-0053-2. Epub 2010 Aug 3.

PMID:
20680566
25.

Bifidobacterium actinocoloniiforme sp. nov. and Bifidobacterium bohemicum sp. nov., from the bumblebee digestive tract.

Killer J, Kopečný J, Mrázek J, Koppová I, Havlík J, Benada O, Kott T.

Int J Syst Evol Microbiol. 2011 Jun;61(Pt 6):1315-21. doi: 10.1099/ijs.0.022525-0. Epub 2010 Jul 23.

PMID:
20656822
26.

Bifidobacteria in the digestive tract of bumblebees.

Killer J, Kopecný J, Mrázek J, Rada V, Dubná S, Marounek M.

Anaerobe. 2010 Apr;16(2):165-70. doi: 10.1016/j.anaerobe.2009.07.007. Epub 2009 Aug 3.

PMID:
19651224
27.

Bifidobacterium bombi sp. nov., from the bumblebee digestive tract.

Killer J, Kopecný J, Mrázek J, Rada V, Benada O, Koppová I, Havlík J, Straka J.

Int J Syst Evol Microbiol. 2009 Aug;59(Pt 8):2020-4. doi: 10.1099/ijs.0.002915-0. Epub 2009 Jun 30.

PMID:
19567560
28.

Reclassification of Clostridium proteoclasticum as Butyrivibrio proteoclasticus comb. nov., a butyrate-producing ruminal bacterium.

Moon CD, Pacheco DM, Kelly WJ, Leahy SC, Li D, Kopecny J, Attwood GT.

Int J Syst Evol Microbiol. 2008 Sep;58(Pt 9):2041-5. doi: 10.1099/ijs.0.65845-0.

PMID:
18768601
29.

Diversity of insect intestinal microflora.

Mrázek J, Strosová L, Fliegerová K, Kott T, Kopecný J.

Folia Microbiol (Praha). 2008;53(3):229-33. doi: 10.1007/s12223-008-0032-z. Epub 2008 Jul 27.

PMID:
18661298
30.

Detection of possible AI-2-mediated quorum sensing system in commensal intestinal bacteria.

Lukás F, Gorenc G, Kopecný J.

Folia Microbiol (Praha). 2008;53(3):221-4. doi: 10.1007/s12223-008-0030-1. Epub 2008 Jul 27.

PMID:
18661296
31.

The intestinal microflora of childhood patients with indicated celiac disease.

Kopecný J, Mrázek J, Fliegerová K, Frühauf P, Tucková L.

Folia Microbiol (Praha). 2008;53(3):214-6. doi: 10.1007/s12223-008-0028-8. Epub 2008 Jul 27.

PMID:
18661294
32.

Chitinolytic activity of the sheep rumen ciliate Diploplastron affine.

Bełzecki G, Miltko R, Michałowski T, Simůnek J, Kopecný J.

Folia Microbiol (Praha). 2008;53(3):201-3. doi: 10.1007/s12223-008-0025-y. Epub 2008 Jul 27.

PMID:
18661291
33.

Postnatal development of bacterial population in the gastrointestinal tract of calves.

Lukás F, Koppová I, Kudrna V, Kopecný J.

Folia Microbiol (Praha). 2007;52(1):99-104.

PMID:
17571805
34.

Relation between phylogenetic position, lipid metabolism and butyrate production by different Butyrivibrio-like bacteria from the rumen.

Paillard D, McKain N, Chaudhary LC, Walker ND, Pizette F, Koppova I, McEwan NR, Kopecný J, Vercoe PE, Louis P, Wallace RJ.

Antonie Van Leeuwenhoek. 2007 May;91(4):417-22. Epub 2006 Nov 1.

PMID:
17077990
35.

Diet-dependent shifts in ruminal butyrate-producing bacteria.

Mrázek J, Tepsic K, Avgustin G, Kopecný J.

Folia Microbiol (Praha). 2006;51(4):294-8.

PMID:
17007429
36.

Effect of fatty acids on growth of conjugated-linoleic-acids-producing bacteria in rumen.

Koppová I, Lukás F, Kopecný J.

Folia Microbiol (Praha). 2006;51(4):291-3.

PMID:
17007428
37.

Effect of gluten-free diet on microbes in the colon.

Kopecný J, Mrázek J, Fliegerová K, Kott T.

Folia Microbiol (Praha). 2006;51(4):287-90.

PMID:
17007427
38.

Occurrence of restriction-modification systems in ruminal butyrate-producing bacteria.

Mrázek J, Piknová M, Pristas P, Kopecný J.

Anaerobe. 2005 Oct;11(5):280-4.

PMID:
16701584
39.

Detection of infant faecal bifidobacteria by enzymatic methods.

Vlková E, Nevoral J, Jencikova B, Kopecný J, Godefrooij J, Trojanová I, Rada V.

J Microbiol Methods. 2005 Mar;60(3):365-73.

PMID:
15649538
40.

Chitinolytic enzymes from Clostridium aminovalericum: activity screening and purification.

Simůnek J, Tishchenko G, Rozhetsky K, Bartonová H, Kopecný J, Hodrová B.

Folia Microbiol (Praha). 2004;49(2):194-8.

PMID:
15227797
41.

Detection of cellulolytic bacteria from the human colon.

Kopecný J, Hajer J, Mrázek J.

Folia Microbiol (Praha). 2004;49(2):175-7.

PMID:
15227792
42.

Fermentation of pectin and glucose, and activity of pectin-degrading enzymes in the rabbit caecal bacterium Bacteroides caccae.

Sirotek K, Slováková L, Kopecný J, Marounek M.

Lett Appl Microbiol. 2004;38(4):327-32.

43.

Butyrivibrio hungatei sp. nov. and Pseudobutyrivibrio xylanivorans sp. nov., butyrate-producing bacteria from the rumen.

Kopecný J, Zorec M, Mrázek J, Kobayashi Y, Marinsek-Logar R.

Int J Syst Evol Microbiol. 2003 Jan;53(Pt 1):201-9.

PMID:
12656174
44.

Identification and characterization of Clostridium paraputrificum, a chitinolytic bacterium of human digestive tract.

Simůnek J, Kopecný J, Hodrová B, Bartonová H.

Folia Microbiol (Praha). 2002;47(5):559-64.

PMID:
12503404
45.

Chitinolytic bacteria of the mammal digestive tract.

Simůnek J, Hodrová B, Bartonová H, Kopecný J.

Folia Microbiol (Praha). 2001;46(1):76-8.

PMID:
11501484
46.

Development of competitive PCR for detection of Butyrivibrio fibrisolvens in the rumen.

Mrázek J, Kopecný J.

Folia Microbiol (Praha). 2001;46(1):63-5.

PMID:
11501480
47.

Reliable identification of Prevotella and Butyrivibrio spp. from rumen by fatty acid methyl ester profiles.

Logar RM, Zorec M, Kopecný J.

Folia Microbiol (Praha). 2001;46(1):57-9.

PMID:
11501478
48.

Phenotypic and genetic data supporting reclassification of Butyrivibrio fibrisolvens isolates.

Kopecný J, Logar RM, Kobayashi Y.

Folia Microbiol (Praha). 2001;46(1):45-8.

PMID:
11501475
49.

Chitinolytic enzymes produced by ovine rumen bacteria.

Kopecný J, Hodrová B.

Folia Microbiol (Praha). 2000;45(5):465-8.

PMID:
11347275
50.

Cellulolytic enzymes of rumen anaerobic fungi Orpinomyces joyonii and Caecomyces communis.

Hodrová B, Kopecný J, Kás J.

Res Microbiol. 1998 Jun;149(6):417-27.

PMID:
9766241

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