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Items: 1 to 50 of 294

1.

H1N1 hemagglutinin-specific HLA-DQ6-restricted CD4+ T cells can be readily detected in narcolepsy type 1 patients and healthy controls.

Schinkelshoek MS, Fronczek R, Kooy-Winkelaar EMC, Petersen J, Reid HH, van der Heide A, Drijfhout JW, Rossjohn J, Lammers GJ, Koning F.

J Neuroimmunol. 2019 Jul 15;332:167-175. doi: 10.1016/j.jneuroim.2019.04.009. Epub 2019 Apr 17.

2.

Safety Assessment of Immune-Mediated Adverse Reactions to Novel Food Proteins.

Fernandez A, Mills ENC, Koning F, Moreno FJ.

Trends Biotechnol. 2019 Apr 17. pii: S0167-7799(19)30069-1. doi: 10.1016/j.tibtech.2019.03.010. [Epub ahead of print]

PMID:
31005332
3.

Correlation Between the Standard Pancreatic Elastase-1 Enzyme-Linked Immunosorbent Assay Test and the New, Rapid Fecal Pancreatic Elastase-1 Test for Diagnosing Exocrine Pancreatic Insufficiency.

Lekkerkerker SJ, Hoogenboom SA, de Koning FH, Schoorlemmer A, Busch OR, Boermeester MA, Fockens P, Besselink MG, van Hooft JE.

Pancreas. 2019 Apr;48(4):e26-e27. doi: 10.1097/MPA.0000000000001291. No abstract available.

PMID:
30973468
4.

CyTOFmerge: Integrating mass cytometry data across multiple panels.

Abdelaal T, Höllt T, van Unen V, Lelieveldt BPF, Koning F, Reinders MJT, Mahfouz A.

Bioinformatics. 2019 Mar 15. pii: btz180. doi: 10.1093/bioinformatics/btz180. [Epub ahead of print]

PMID:
30874801
5.

Predicting cell populations in single cell mass cytometry data.

Abdelaal T, van Unen V, Höllt T, Koning F, Reinders MJT, Mahfouz A.

Cytometry A. 2019 Mar 12. doi: 10.1002/cyto.a.23738. [Epub ahead of print]

PMID:
30861637
6.

Erratum for Sehrawat et al., "Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes".

Sehrawat U, Koning F, Ashkenazi S, Stelzer G, Leshkowitz D, Dikstein R.

Mol Cell Biol. 2019 Mar 1;39(6). pii: e00049-19. doi: 10.1128/MCB.00049-19. Print 2019 Mar 15. No abstract available.

7.

Maturing Human CD127+ CCR7+ PDL1+ Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens.

Fergusson JR, Morgan MD, Bruchard M, Huitema L, Heesters BA, van Unen V, van Hamburg JP, van der Wel NN, Picavet D, Koning F, Tas SW, Anderson MS, Marioni JC, Holländer GA, Spits H.

Front Immunol. 2019 Jan 14;9:2902. doi: 10.3389/fimmu.2018.02902. eCollection 2018.

8.

Memory CD4+ T cells are generated in the human fetal intestine.

Li N, van Unen V, Abdelaal T, Guo N, Kasatskaya SA, Ladell K, McLaren JE, Egorov ES, Izraelson M, Chuva de Sousa Lopes SM, Höllt T, Britanova OV, Eggermont J, de Miranda NFCC, Chudakov DM, Price DA, Lelieveldt BPF, Koning F.

Nat Immunol. 2019 Mar;20(3):301-312. doi: 10.1038/s41590-018-0294-9. Epub 2019 Jan 21.

PMID:
30664737
9.

Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.

Sehrawat U, Koning F, Ashkenazi S, Stelzer G, Leshkowitz D, Dikstein R.

Mol Cell Biol. 2019 Jan 16;39(3). pii: e00441-18. doi: 10.1128/MCB.00441-18. Print 2019 Feb 1. Erratum in: Mol Cell Biol. 2019 Mar 1;39(6):.

PMID:
30420357
10.

Mass cytometry reveals innate lymphoid cell differentiation pathways in the human fetal intestine.

Li N, van Unen V, Höllt T, Thompson A, van Bergen J, Pezzotti N, Eisemann E, Vilanova A, Chuva de Sousa Lopes SM, Lelieveldt BPF, Koning F.

J Exp Med. 2018 May 7;215(5):1383-1396. doi: 10.1084/jem.20171934. Epub 2018 Mar 6.

11.

The Contribution of Cytomegalovirus Infection to Immune Senescence Is Set by the Infectious Dose.

Redeker A, Remmerswaal EBM, van der Gracht ETI, Welten SPM, Höllt T, Koning F, Cicin-Sain L, Nikolich-Žugich J, Ten Berge IJM, van Lier RAW, van Unen V, Arens R.

Front Immunol. 2018 Jan 10;8:1953. doi: 10.3389/fimmu.2017.01953. eCollection 2017.

12.

Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.

van Unen V, Höllt T, Pezzotti N, Li N, Reinders MJT, Eisemann E, Koning F, Vilanova A, Lelieveldt BPF.

Nat Commun. 2017 Nov 23;8(1):1740. doi: 10.1038/s41467-017-01689-9.

13.

A Specialist Macaque MHC Class I Molecule with HLA-B*27-like Peptide-Binding Characteristics.

de Groot NG, Heijmans CMC, de Ru AH, Janssen GMC, Drijfhout JW, Otting N, Vangenot C, Doxiadis GGM, Koning F, van Veelen PA, Bontrop RE.

J Immunol. 2017 Nov 15;199(10):3679-3690. doi: 10.4049/jimmunol.1700502. Epub 2017 Oct 11.

14.

Intratumoral HPV16-Specific T Cells Constitute a Type I-Oriented Tumor Microenvironment to Improve Survival in HPV16-Driven Oropharyngeal Cancer.

Welters MJP, Ma W, Santegoets SJAM, Goedemans R, Ehsan I, Jordanova ES, van Ham VJ, van Unen V, Koning F, van Egmond SI, Charoentong P, Trajanoski Z, van der Velden LA, van der Burg SH.

Clin Cancer Res. 2018 Feb 1;24(3):634-647. doi: 10.1158/1078-0432.CCR-17-2140. Epub 2017 Oct 10.

15.

CyteGuide: Visual Guidance for Hierarchical Single-Cell Analysis.

Hollt T, Pezzotti N, van Unen V, Koning F, Lelieveldt BPF, Vilanova A.

IEEE Trans Vis Comput Graph. 2018 Jan;24(1):739-748. doi: 10.1109/TVCG.2017.2744318. Epub 2017 Aug 29.

PMID:
28866537
16.

IgG is elevated in obese white adipose tissue but does not induce glucose intolerance via Fcγ-receptor or complement.

van Dam AD, van Beek L, Pronk ACM, van den Berg SM, Van den Bossche J, de Winther MPJ, Koning F, van Kooten C, Rensen PCN, Boon MR, Verbeek JS, van Dijk KW, van Harmelen V.

Int J Obes (Lond). 2018 Feb;42(2):260-269. doi: 10.1038/ijo.2017.209. Epub 2017 Aug 30.

PMID:
28852207
17.

Abrogation of Immunogenic Properties of Gliadin Peptides through Transamidation by Microbial Transglutaminase Is Acyl-Acceptor Dependent.

Zhou L, Kooy-Winkelaar YMC, Cordfunke RA, Dragan I, Thompson A, Drijfhout JW, van Veelen PA, Chen H, Koning F.

J Agric Food Chem. 2017 Aug 30;65(34):7542-7552. doi: 10.1021/acs.jafc.7b02557. Epub 2017 Aug 17.

18.

Hybrid Imaging Labels: Providing the Link Between Mass Spectrometry-Based Molecular Pathology and Theranostics.

Buckle T, van der Wal S, van Malderen SJ, Müller L, Kuil J, van Unen V, Peters RJ, van Bemmel ME, McDonnell LA, Velders AH, Koning F, Vanhaeke F, van Leeuwen FW.

Theranostics. 2017 Jan 12;7(3):624-633. doi: 10.7150/thno.17484. eCollection 2017.

19.

CD4 T-cell cytokines synergize to induce proliferation of malignant and nonmalignant innate intraepithelial lymphocytes.

Kooy-Winkelaar YM, Bouwer D, Janssen GM, Thompson A, Brugman MH, Schmitz F, de Ru AH, van Gils T, Bouma G, van Rood JJ, van Veelen PA, Mearin ML, Mulder CJ, Koning F, van Bergen J.

Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):E980-E989. doi: 10.1073/pnas.1620036114. Epub 2017 Jan 3.

20.

Weight loss induced by very low calorie diet is associated with a more beneficial systemic inflammatory profile than by Roux-en-Y gastric bypass.

Lips MA, van Klinken JB, Pijl H, Janssen I, Willems van Dijk K, Koning F, van Harmelen V.

Metabolism. 2016 Nov;65(11):1614-1620. doi: 10.1016/j.metabol.2016.07.013. Epub 2016 Aug 16.

PMID:
27733249
21.

Macrophage-mediated gliadin degradation and concomitant IL-27 production drive IL-10- and IFN-γ-secreting Tr1-like-cell differentiation in a murine model for gluten tolerance.

van Leeuwen MA, Costes LMM, van Berkel LA, Simons-Oosterhuis Y, du Pré MF, Kozijn AE, Raatgeep HC, Lindenbergh-Kortleve DJ, van Rooijen N, Koning F, Samsom JN.

Mucosal Immunol. 2017 May;10(3):635-649. doi: 10.1038/mi.2016.76. Epub 2016 Aug 31.

PMID:
27579860
22.

Diverse T Cell Receptor Gene Usage in HLA-DQ8-Associated Celiac Disease Converges into a Consensus Binding Solution.

Petersen J, Kooy-Winkelaar Y, Loh KL, Tran M, van Bergen J, Koning F, Rossjohn J, Reid HH.

Structure. 2016 Oct 4;24(10):1643-1657. doi: 10.1016/j.str.2016.07.010. Epub 2016 Aug 25.

23.

Mass Cytometry of the Human Mucosal Immune System Identifies Tissue- and Disease-Associated Immune Subsets.

van Unen V, Li N, Molendijk I, Temurhan M, Höllt T, van der Meulen-de Jong AE, Verspaget HW, Mearin ML, Mulder CJ, van Bergen J, Lelieveldt BP, Koning F.

Immunity. 2016 May 17;44(5):1227-39. doi: 10.1016/j.immuni.2016.04.014. Epub 2016 May 10.

24.

A biased view toward celiac disease.

Rossjohn J, Koning F.

Mucosal Immunol. 2016 May;9(3):583-6. doi: 10.1038/mi.2016.17. Epub 2016 Mar 23.

PMID:
27007675
25.

Lactobacillus plantarum NCIMB8826 ameliorates inflammation of colon and skin in human APOC1 transgenic mice.

Mariman R, Reefman E, Tielen F, Persoon-Deen C, van de Mark K, Worms N, Koning F, Nagelkerken L.

Benef Microbes. 2016;7(2):215-25. doi: 10.3920/BM2015.0074. Epub 2015 Dec 21.

PMID:
26689228
26.

Adverse Effects of Wheat Gluten.

Koning F.

Ann Nutr Metab. 2015;67 Suppl 2:8-14. doi: 10.1159/000440989. Epub 2015 Nov 26.

27.

FcRγ-chain deficiency reduces the development of diet-induced obesity.

van Beek L, Vroegrijk IO, Katiraei S, Heemskerk MM, van Dam AD, Kooijman S, Rensen PC, Koning F, Verbeek JS, Willems van Dijk K, van Harmelen V.

Obesity (Silver Spring). 2015 Dec;23(12):2435-44. doi: 10.1002/oby.21309. Epub 2015 Nov 2.

28.

Isolation and Cloning of Gluten-Specific T Cells in Celiac Disease.

Kooy-Winkelaar Y, Koning F.

Methods Mol Biol. 2015;1326:53-9. doi: 10.1007/978-1-4939-2839-2_6.

PMID:
26498612
29.

Recent insight in the pathophysiology of coeliac disease: relevance to rheumatoid arthritis.

Koning F.

Clin Exp Rheumatol. 2015 Jul-Aug;33(4 Suppl 92):S8-10. Epub 2015 Oct 12. Review.

PMID:
26457726
30.

An Arthritis-Suppressive and Treg Cell-Inducing CD4+ T Cell Epitope Is Functional in the Context of HLA-Restricted T Cell Responses.

de Wolf C, van der Zee R, den Braber I, Glant T, Maillère B, Favry E, van Lummel M, Koning F, Hoek A, Ludwig I, van Eden W, Broere F.

Arthritis Rheumatol. 2016 Mar;68(3):639-47. doi: 10.1002/art.39444.

31.

Letter: gluten digestion in the stomach and duodenum by Aspergillus niger-derived enzyme - things to ponder. Authors' reply.

Salden BN, Montserrat V, Troost FJ, Bruins MJ, Edens L, Bartholomé R, Haenen GR, Winkens B, Koning F, Masclee AA.

Aliment Pharmacol Ther. 2015 Oct;42(7):946-7. doi: 10.1111/apt.13382. No abstract available.

32.

Editorial: enhancing gluten digestion in the stomach - a further help to minimise unintentional ingestion? Authors' reply.

Salden BN, Monserrat V, Troost FJ, Bruins MJ, Edens L, Bartholomé R, Haenen GR, Winkens B, Koning F, Masclee AA.

Aliment Pharmacol Ther. 2015 Aug;42(4):485. doi: 10.1111/apt.13296. No abstract available.

33.

Coeliac disease and gluten-related disorders in childhood.

Vriezinga SL, Schweizer JJ, Koning F, Mearin ML.

Nat Rev Gastroenterol Hepatol. 2015 Sep;12(9):527-36. doi: 10.1038/nrgastro.2015.98. Epub 2015 Jun 23. Review.

PMID:
26100369
34.

Preface.

Koning F.

Best Pract Res Clin Gastroenterol. 2015 Jun;29(3):363. doi: 10.1016/j.bpg.2015.05.002. Epub 2015 May 12. No abstract available.

PMID:
26060102
35.

Randomised clinical study: Aspergillus niger-derived enzyme digests gluten in the stomach of healthy volunteers.

Salden BN, Monserrat V, Troost FJ, Bruins MJ, Edens L, Bartholomé R, Haenen GR, Winkens B, Koning F, Masclee AA.

Aliment Pharmacol Ther. 2015 Aug;42(3):273-85. doi: 10.1111/apt.13266. Epub 2015 Jun 4.

36.

Ineffective degradation of immunogenic gluten epitopes by currently available digestive enzyme supplements.

Janssen G, Christis C, Kooy-Winkelaar Y, Edens L, Smith D, van Veelen P, Koning F.

PLoS One. 2015 Jun 1;10(6):e0128065. doi: 10.1371/journal.pone.0128065. eCollection 2015.

37.

Coeliac disease and rheumatoid arthritis: similar mechanisms, different antigens.

Koning F, Thomas R, Rossjohn J, Toes RE.

Nat Rev Rheumatol. 2015 Aug;11(8):450-61. doi: 10.1038/nrrheum.2015.59. Epub 2015 May 19. Review.

PMID:
25986717
38.

The composition and differentiation potential of the duodenal intraepithelial innate lymphocyte compartment is altered in coeliac disease.

Schmitz F, Kooy-Winkelaar Y, Wiekmeijer AS, Brugman MH, Mearin ML, Mulder C, Chuva de Sousa Lopes S, Mummery CL, Staal FJ, van Bergen J, Koning F.

Gut. 2016 Aug;65(8):1269-78. doi: 10.1136/gutjnl-2014-308153. Epub 2015 May 12.

PMID:
25966995
39.

The limited storage capacity of gonadal adipose tissue directs the development of metabolic disorders in male C57Bl/6J mice.

van Beek L, van Klinken JB, Pronk AC, van Dam AD, Dirven E, Rensen PC, Koning F, Willems van Dijk K, van Harmelen V.

Diabetologia. 2015 Jul;58(7):1601-9. doi: 10.1007/s00125-015-3594-8. Epub 2015 May 12.

40.

Determinants of gliadin-specific T cell selection in celiac disease.

Petersen J, van Bergen J, Loh KL, Kooy-Winkelaar Y, Beringer DX, Thompson A, Bakker SF, Mulder CJ, Ladell K, McLaren JE, Price DA, Rossjohn J, Reid HH, Koning F.

J Immunol. 2015 Jun 15;194(12):6112-22. doi: 10.4049/jimmunol.1500161. Epub 2015 May 6.

41.

The Probiotic Mixture VSL#3 Has Differential Effects on Intestinal Immune Parameters in Healthy Female BALB/c and C57BL/6 Mice.

Mariman R, Tielen F, Koning F, Nagelkerken L.

J Nutr. 2015 Jun;145(6):1354-61. doi: 10.3945/jn.114.199729. Epub 2015 May 6.

PMID:
25948785
42.

Crossreactivity to vinculin and microbes provides a molecular basis for HLA-based protection against rheumatoid arthritis.

van Heemst J, Jansen DT, Polydorides S, Moustakas AK, Bax M, Feitsma AL, Bontrop-Elferink DG, Baarse M, van der Woude D, Wolbink GJ, Rispens T, Koning F, de Vries RR, Papadopoulos GK, Archontis G, Huizinga TW, Toes RE.

Nat Commun. 2015 May 5;6:6681. doi: 10.1038/ncomms7681.

PMID:
25942574
43.

Therapy in RCDII: Rationale for Combination Strategies?

Nijeboer P, Malamut G, Bouma G, Cerf-Bensussan N, Koning F, van Bergen J, Cellier C, Mulder CJ.

Dig Dis. 2015;33(2):227-30. doi: 10.1159/000381076. Epub 2015 Apr 22. Review.

PMID:
25925927
44.

Local communication among mucosal immune cells in patients with celiac disease.

van Bergen J, Mulder CJ, Mearin ML, Koning F.

Gastroenterology. 2015 May;148(6):1187-94. doi: 10.1053/j.gastro.2015.01.030. Epub 2015 Jan 24. Review.

PMID:
25623043
45.

The probiotic mixture VSL#3 dampens LPS-induced chemokine expression in human dendritic cells by inhibition of STAT-1 phosphorylation.

Mariman R, Tielen F, Koning F, Nagelkerken L.

PLoS One. 2014 Dec 29;9(12):e115676. doi: 10.1371/journal.pone.0115676. eCollection 2014.

46.

Influence of dietary components on Aspergillus niger prolyl endoprotease mediated gluten degradation.

Montserrat V, Bruins MJ, Edens L, Koning F.

Food Chem. 2015 May 1;174:440-5. doi: 10.1016/j.foodchem.2014.11.053. Epub 2014 Nov 14.

PMID:
25529703
47.

Randomized feeding intervention in infants at high risk for celiac disease.

Vriezinga SL, Auricchio R, Bravi E, Castillejo G, Chmielewska A, Crespo Escobar P, Kolaček S, Koletzko S, Korponay-Szabo IR, Mummert E, Polanco I, Putter H, Ribes-Koninckx C, Shamir R, Szajewska H, Werkstetter K, Greco L, Gyimesi J, Hartman C, Hogen Esch C, Hopman E, Ivarsson A, Koltai T, Koning F, Martinez-Ojinaga E, te Marvelde C, Pavic A, Romanos J, Stoopman E, Villanacci V, Wijmenga C, Troncone R, Mearin ML.

N Engl J Med. 2014 Oct 2;371(14):1304-15. doi: 10.1056/NEJMoa1404172.

48.

The probiotic mixture VSL#3 mediates both pro- and anti-inflammatory responses in bone marrow-derived dendritic cells from C57BL/6 and BALB/c mice.

Mariman R, Kremer B, Koning F, Nagelkerken L.

Br J Nutr. 2014 Oct 14;112(7):1088-97. doi: 10.1017/S000711451400169X. Epub 2014 Sep 2.

PMID:
25181025
49.

Pathophysiology of celiac disease.

Koning F.

J Pediatr Gastroenterol Nutr. 2014 Jul;59 Suppl 1:S1-4. doi: 10.1097/01.mpg.0000450391.46027.48.

PMID:
24979191
50.

Celiac disease: past, present, and future challenges: dedicated to the memory of our friend and colleague, Prof David Branski (1944-2013).

Shamir R, Heyman MB, Koning F, Wijmenga C, Gutierrez-Achury J, Catassi C, Gatti S, Fasano A, Discepolo V, Korponay-Szabó IR, Zevit N, Maki M, Schaart MW, Mearin ML, Troncone R.

J Pediatr Gastroenterol Nutr. 2014 Jul;59 Suppl 1:S1-20. doi: 10.1097/MPG.0000000000000410. No abstract available. Erratum in: J Pediatr Gastroenterol Nutr. 2016 Mar;62(3):514. Wijimenga, Cisca [corrected to Wijmenga, Cisca].

PMID:
24840514

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