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Role for Gag-CA Interdomain Linker in Primate Lentiviral Replication.

Doi N, Koma T, Adachi A, Nomaguchi M.

Front Microbiol. 2019 Aug 7;10:1831. doi: 10.3389/fmicb.2019.01831. eCollection 2019.


Allosteric Regulation of HIV-1 Capsid Structure for Gag Assembly, Virion Production, and Viral Infectivity by a Disordered Interdomain Linker.

Koma T, Kotani O, Miyakawa K, Ryo A, Yokoyama M, Doi N, Adachi A, Sato H, Nomaguchi M.

J Virol. 2019 Aug 13;93(17). pii: e00381-19. doi: 10.1128/JVI.00381-19. Print 2019 Sep 1.


Concomitant Enhancement of HIV-1 Replication Potential and Neutralization-Resistance in Concert With Three Adaptive Mutations in Env V1/C2/C4 Domains.

Doi N, Yokoyama M, Koma T, Kotani O, Sato H, Adachi A, Nomaguchi M.

Front Microbiol. 2019 Jan 17;10:2. doi: 10.3389/fmicb.2019.00002. eCollection 2019.


CXCR4- and CCR5-Tropic HIV-1 Clones Are Both Tractable to Grow in Rhesus Macaques.

Doi N, Miura T, Mori H, Sakawaki H, Koma T, Adachi A, Nomaguchi M.

Front Microbiol. 2018 Oct 18;9:2510. doi: 10.3389/fmicb.2018.02510. eCollection 2018.


Review of Mammarenavirus Biology and Replication.

Hallam SJ, Koma T, Maruyama J, Paessler S.

Front Microbiol. 2018 Aug 3;9:1751. doi: 10.3389/fmicb.2018.01751. eCollection 2018.


Vaccine-elicited receptor-binding site antibodies neutralize two New World hemorrhagic fever arenaviruses.

Clark LE, Mahmutovic S, Raymond DD, Dilanyan T, Koma T, Manning JT, Shankar S, Levis SC, Briggiler AM, Enria DA, Wucherpfennig KW, Paessler S, Abraham J.

Nat Commun. 2018 May 14;9(1):1884. doi: 10.1038/s41467-018-04271-z.


Virological characterization of HIV-1 CA-NTD mutants constructed in a virus-lineage reflected manner.

Nakanishi S, Watanabe S, Doi N, Koma T, Adachi A, Nomaguchi M.

J Med Invest. 2018;65(1.2):110-115. doi: 10.2152/jmi.65.110.


Zika virus infection elicits auto-antibodies to C1q.

Koma T, Veljkovic V, Anderson DE, Wang LF, Rossi SL, Shan C, Shi PY, Beasley DW, Bukreyeva N, Smith JN, Hallam S, Huang C, von Messling V, Paessler S.

Sci Rep. 2018 Jan 30;8(1):1882. doi: 10.1038/s41598-018-20185-8.


Production of HIV-1 vif mRNA Is Modulated by Natural Nucleotide Variations and SLSA1 RNA Structure in SA1D2prox Genomic Region.

Nomaguchi M, Doi N, Yoshida T, Koma T, Adachi S, Ode H, Iwatani Y, Yokoyama M, Sato H, Adachi A.

Front Microbiol. 2017 Dec 18;8:2542. doi: 10.3389/fmicb.2017.02542. eCollection 2017.


Merimepodib, an IMPDH inhibitor, suppresses replication of Zika virus and other emerging viral pathogens.

Tong X, Smith J, Bukreyeva N, Koma T, Manning JT, Kalkeri R, Kwong AD, Paessler S.

Antiviral Res. 2018 Jan;149:34-40. doi: 10.1016/j.antiviral.2017.11.004. Epub 2017 Nov 8.


Complete Genome Sequences of Human Immunodeficiency Type 1 Viruses Genetically Engineered To Be Tropic for Rhesus Macaques.

Nomaguchi M, Doi N, Koma T, Adachi A.

Genome Announc. 2017 Sep 28;5(39). pii: e01063-17. doi: 10.1128/genomeA.01063-17.


HIV-1 mutates to adapt in fluxing environments.

Nomaguchi M, Doi N, Koma T, Adachi A.

Microbes Infect. 2018 Oct - Nov;20(9-10):610-614. doi: 10.1016/j.micinf.2017.08.003. Epub 2017 Aug 30. Review.


Highly Pathogenic New World Arenavirus Infection Activates the Pattern Recognition Receptor Protein Kinase R without Attenuating Virus Replication in Human Cells.

Huang C, Kolokoltsova OA, Mateer EJ, Koma T, Paessler S.

J Virol. 2017 Sep 27;91(20). pii: e01090-17. doi: 10.1128/JVI.01090-17. Print 2017 Oct 15.


Novel In Vitro Screening System Based on Differential Scanning Fluorimetry to Search for Small Molecules against the Disassembly or Assembly of HIV-1 Capsid Protein.

Miyazaki Y, Doi N, Koma T, Adachi A, Nomaguchi M.

Front Microbiol. 2017 Jul 24;8:1413. doi: 10.3389/fmicb.2017.01413. eCollection 2017.


Comparison of Biochemical Properties of HIV-1 and HIV-2 Capsid Proteins.

Miyazaki Y, Miyake A, Doi N, Koma T, Uchiyama T, Adachi A, Nomaguchi M.

Front Microbiol. 2017 Jun 13;8:1082. doi: 10.3389/fmicb.2017.01082. eCollection 2017.


Mouse Model of Neurological Complications Resulting from Encephalitic Alphavirus Infection.

Ronca SE, Smith J, Koma T, Miller MM, Yun N, Dineley KT, Paessler S.

Front Microbiol. 2017 Feb 7;8:188. doi: 10.3389/fmicb.2017.00188. eCollection 2017.


Absence of an N-Linked Glycosylation Motif in the Glycoprotein of the Live-Attenuated Argentine Hemorrhagic Fever Vaccine, Candid #1, Results in Its Improper Processing, and Reduced Surface Expression.

Manning JT, Seregin AV, Yun NE, Koma T, Huang C, Barral J, de la Torre JC, Paessler S.

Front Cell Infect Microbiol. 2017 Feb 6;7:20. doi: 10.3389/fcimb.2017.00020. eCollection 2017.


Appearance of renal hemorrhage in adult mice after inoculation of patient-derived hantavirus.

Shimizu K, Koma T, Yoshimatsu K, Tsuda Y, Isegawa Y, Arikawa J.

Virol J. 2017 Jan 26;14(1):13. doi: 10.1186/s12985-017-0686-8.


The Ectodomain of Glycoprotein from the Candid#1 Vaccine Strain of Junin Virus Rendered Machupo Virus Partially Attenuated in Mice Lacking IFN-αβ/γ Receptor.

Koma T, Huang C, Aronson JF, Walker AG, Miller M, Smith JN, Patterson M, Paessler S.

PLoS Negl Trop Dis. 2016 Aug 31;10(8):e0004969. doi: 10.1371/journal.pntd.0004969. eCollection 2016 Aug.


Serological evidence of infection with rodent-borne hepatitis E virus HEV-C1 or antigenically related virus in humans.

Shimizu K, Hamaguchi S, Ngo CC, Li TC, Ando S, Yoshimatsu K, Yasuda SP, Koma T, Isozumi R, Tsuda Y, Fujita H, Pham TT, LE MQ, Dang AD, Nguyen TQ, Yoshida LM, Ariyoshi K, Arikawa J.

J Vet Med Sci. 2016 Dec 1;78(11):1677-1681. Epub 2016 Aug 7.


Animal Model of Sensorineural Hearing Loss Associated with Lassa Virus Infection.

Yun NE, Ronca S, Tamura A, Koma T, Seregin AV, Dineley KT, Miller M, Cook R, Shimizu N, Walker AG, Smith JN, Fair JN, Wauquier N, Bockarie B, Khan SH, Makishima T, Paessler S.

J Virol. 2015 Dec 30;90(6):2920-7. doi: 10.1128/JVI.02948-15.


Machupo Virus Expressing GPC of the Candid#1 Vaccine Strain of Junin Virus Is Highly Attenuated and Immunogenic.

Koma T, Patterson M, Huang C, Seregin AV, Maharaj PD, Miller M, Smith JN, Walker AG, Hallam S, Paessler S.

J Virol. 2015 Nov 18;90(3):1290-7. doi: 10.1128/JVI.02615-15. Print 2016 Feb 1.


Highly Pathogenic New World and Old World Human Arenaviruses Induce Distinct Interferon Responses in Human Cells.

Huang C, Kolokoltsova OA, Yun NE, Seregin AV, Ronca S, Koma T, Paessler S.

J Virol. 2015 Jul;89(14):7079-88. doi: 10.1128/JVI.00526-15. Epub 2015 Apr 29.


Distinct genetic characteristics of Sri Lankan Rattus and Bandicota (Murinae, Rodentia) inferred from mitochondrial and nuclear markers.

Yasuda SP, Gamage CD, Koizumi N, Nishio S, Isozumi R, Shimizu K, Koma T, Amada T, Suzuki H, Yoshimatsu K, Arikawa J.

Genes Genet Syst. 2014;89(2):71-80.


A substitution in the transmembrane region of the glycoprotein leads to an unstable attenuation of Machupo virus.

Patterson M, Koma T, Seregin A, Huang C, Miller M, Smith J, Yun N, Smith J, Paessler S.

J Virol. 2014 Sep;88(18):10995-9. doi: 10.1128/JVI.01007-14. Epub 2014 Jul 16.


Development of an immunochromatography strip test based on truncated nucleocapsid antigens of three representative hantaviruses.

Amada T, Yoshimatsu K, Koma T, Shimizu K, Gamage CD, Shiokawa K, Nishio S, Ahlm C, Arikawa J.

Virol J. 2014 May 14;11:87. doi: 10.1186/1743-422X-11-87.


Neutrophil depletion suppresses pulmonary vascular hyperpermeability and occurrence of pulmonary edema caused by hantavirus infection in C.B-17 SCID mice.

Koma T, Yoshimatsu K, Nagata N, Sato Y, Shimizu K, Yasuda SP, Amada T, Nishio S, Hasegawa H, Arikawa J.

J Virol. 2014 Jul;88(13):7178-88. doi: 10.1128/JVI.00254-14. Epub 2014 Apr 9.


Innate immune response to arenaviral infection: a focus on the highly pathogenic New World hemorrhagic arenaviruses.

Koma T, Huang C, Kolokoltsova OA, Brasier AR, Paessler S.

J Mol Biol. 2013 Dec 13;425(24):4893-903. doi: 10.1016/j.jmb.2013.09.028. Epub 2013 Sep 26. Review.


Role of nucleocapsid protein of hantaviruses in intracellular traffic of viral glycoproteins.

Shimizu K, Yoshimatsu K, Koma T, Yasuda SP, Arikawa J.

Virus Res. 2013 Dec 26;178(2):349-56. doi: 10.1016/j.virusres.2013.09.022. Epub 2013 Sep 23.


Rapid, whole blood diagnostic test for detecting anti-hantavirus antibody in rats.

Amada T, Yoshimatsu K, Yasuda SP, Shimizu K, Koma T, Hayashimoto N, Gamage CD, Nishio S, Takakura A, Arikawa J.

J Virol Methods. 2013 Oct;193(1):42-9. doi: 10.1016/j.jviromet.2013.04.021. Epub 2013 May 15.


Epidemiology of hantavirus infection in Thousand Islands regency of Jakarta, Indonesia.

Ibrahim IN, Shimizu K, Yoshimatsu K, Yunianto A, Salwati E, Yasuda SP, Koma T, Endo R, Arikawa J.

J Vet Med Sci. 2013;75(8):1003-8. Epub 2013 Mar 18.


A survey of rodent-borne pathogens carried by wild Rattus spp. in Northern Vietnam.

Koma T, Yoshimatsu K, Yasuda SP, Li T, Amada T, Shimizu K, Isozumi R, Mai LT, Hoa NT, Nguyen V, Yamashiro T, Hasebe F, Arikawa J.

Epidemiol Infect. 2013 Sep;141(9):1876-84. doi: 10.1017/S0950268812002385. Epub 2012 Nov 1.


bla(NDM-1)-positive Klebsiella pneumoniae from environment, Vietnam.

Isozumi R, Yoshimatsu K, Yamashiro T, Hasebe F, Nguyen BM, Ngo TC, Yasuda SP, Koma T, Shimizu K, Arikawa J.

Emerg Infect Dis. 2012 Aug;18(8):1383-5. doi: 10.3201/eid1808.111816. No abstract available.


Novel serological tools for detection of Thottapalayam virus, a Soricomorpha-borne hantavirus.

Schlegel M, Tegshduuren E, Yoshimatsu K, Petraityte R, Sasnauskas K, Hammerschmidt B, Friedrich R, Mertens M, Groschup MH, Arai S, Endo R, Shimizu K, Koma T, Yasuda S, Ishihara C, Ulrich RG, Arikawa J, Köllner B.

Arch Virol. 2012 Nov;157(11):2179-87. doi: 10.1007/s00705-012-1405-9. Epub 2012 Jul 25.


Development of a serotyping enzyme-linked immunosorbent assay system based on recombinant truncated hantavirus nucleocapsid proteins for New World hantavirus infection.

Koma T, Yoshimatsu K, Taruishi M, Miyashita D, Endo R, Shimizu K, Yasuda SP, Amada T, Seto T, Murata R, Yoshida H, Kariwa H, Takashima I, Arikawa J.

J Virol Methods. 2012 Oct;185(1):74-81. doi: 10.1016/j.jviromet.2012.06.006. Epub 2012 Jun 18.


Studies on hantavirus infection in small mammals captured in southern and central highland area of Vietnam.

Luan VD, Yoshimatsu K, Endo R, Taruishi M, Huong VT, Dat DT, Tien PC, Shimizu K, Koma T, Yasuda SP, Nhi L, Huong VT, Arikawa J.

J Vet Med Sci. 2012 Sep;74(9):1155-62. Epub 2012 May 22.


The N-terminus of the Montano virus nucleocapsid protein possesses broadly cross-reactive conformation-dependent epitopes conserved in rodent-borne hantaviruses.

Saasa N, Yoshida H, Shimizu K, Sánchez-Hernández C, Romero-Almaraz Mde L, Koma T, Sanada T, Seto T, Yoshii K, Ramos C, Yoshimatsu K, Arikawa J, Takashima I, Kariwa H.

Virology. 2012 Jun 20;428(1):48-57. doi: 10.1016/j.virol.2012.03.001. Epub 2012 Apr 19.


Application of truncated nucleocapsid protein (N) for serotyping ELISA of murinae-associated hantavirus infection in rats.

Yasuda SP, Yoshimatsu K, Koma T, Shimizu K, Endo R, Isozumi R, Arikawa J.

J Vet Med Sci. 2012 Feb;74(2):215-9. Epub 2011 Sep 22.


Characterization of self-assembled virus-like particles of rat hepatitis E virus generated by recombinant baculoviruses.

Li TC, Yoshimatsu K, Yasuda SP, Arikawa J, Koma T, Kataoka M, Ami Y, Suzaki Y, Mai le TQ, Hoa NT, Yamashiro T, Hasebe F, Takeda N, Wakita T.

J Gen Virol. 2011 Dec;92(Pt 12):2830-7. doi: 10.1099/vir.0.034835-0. Epub 2011 Aug 24.


Truncated hantavirus nucleocapsid proteins for serotyping Sin Nombre, Andes, and Laguna Negra hantavirus infections in humans and rodents.

Koma T, Yoshimatsu K, Pini N, Safronetz D, Taruishi M, Levis S, Endo R, Shimizu K, Yasuda SP, Ebihara H, Feldmann H, Enria D, Arikawa J.

J Clin Microbiol. 2010 May;48(5):1635-42. doi: 10.1128/JCM.00072-10. Epub 2010 Mar 24.


Different cross-reactivity of human and rodent sera to Tula virus and Puumala virus.

Tegshduuren E, Yoshimatsu K, Taruishi M, Endo R, Shimizu K, Koma T, Yasuda SP, Kariwa H, Arikawa J, Ishihara C.

Comp Immunol Microbiol Infect Dis. 2010 Dec;33(6):e67-73. doi: 10.1016/j.cimid.2010.01.001. Epub 2010 Feb 8.


Molecular epidemiological and serological studies of hantavirus infection in northern Vietnam.

Truong TT, Yoshimatsu K, Araki K, Lee BH, Nakamura I, Endo R, Shimizu K, Yasuda SP, Koma T, Taruishi M, Okumura M, Truong UN, Arikawa J.

J Vet Med Sci. 2009 Oct;71(10):1357-63.


Detection of circulating Asian H5N1 viruses by a newly established monoclonal antibody.

Du A, Daidoji T, Koma T, Ibrahim MS, Nakamura S, de Silva UC, Ueda M, Yang CS, Yasunaga T, Ikuta K, Nakaya T.

Biochem Biophys Res Commun. 2009 Jan 9;378(2):197-202. doi: 10.1016/j.bbrc.2008.11.022. Epub 2008 Nov 14.


H5N1 avian influenza virus induces apoptotic cell death in mammalian airway epithelial cells.

Daidoji T, Koma T, Du A, Yang CS, Ueda M, Ikuta K, Nakaya T.

J Virol. 2008 Nov;82(22):11294-307. doi: 10.1128/JVI.01192-08. Epub 2008 Sep 10.


A new method for determining HT deposition velocity and dependence of the velocity on environmental factors.

Koarashi J, Amano H, Andoh M, Iida T, Koma T.

Radiat Prot Dosimetry. 2001;93(3):237-43.


Mutual-exclusion statistics in exactly solvable models in one and higher dimensions at low temperatures.

Hatsugai Y, Kohmoto M, Koma T, Wu YS.

Phys Rev B Condens Matter. 1996 Aug 15;54(8):5358-5367. No abstract available.


Classical XY Model in 1.99 Dimensions.

Koma T, Tasaki H.

Phys Rev Lett. 1995 May 15;74(20):3916-3919. No abstract available.


Symmetry breaking and long range order in Heisenberg antiferromagnets.

Koma T, Tasaki H.

Phys Rev Lett. 1993 Jan 4;70(1):93-95. No abstract available.


Decay of superconducting and magnetic correlations in one- and two-dimensional Hubbard models.

Koma T, Tasaki H.

Phys Rev Lett. 1992 May 25;68(21):3248-3251. No abstract available.


Detergency and mechanism of soil removal in detergent-enzyme system.

Kame M, Koda H, Kato A, Koma T.

J Am Oil Chem Soc. 1973 Nov;50(11):464-9. No abstract available.


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