Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 219

1.

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization.

Nishiyama T, Sakayama H, de Vries J, Buschmann H, Saint-Marcoux D, Ullrich KK, Haas FB, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson PKI, Janitza P, Kern R, Heyl A, Rümpler F, Villalobos LIAC, Clay JM, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington AJ, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan GV, Van Nieuwerburgh F, Deforce D, Chang C, Karol KG, Hedrich R, Ulvskov P, Glöckner G, Delwiche CF, Petrášek J, Van de Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theißen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing SA.

Cell. 2018 Jul 12;174(2):448-464.e24. doi: 10.1016/j.cell.2018.06.033.

PMID:
30007417
2.

WAIF1 Is a Cell-Surface CTHRC1 Binding Protein Coupling Bone Resorption and Formation.

Matsuoka K, Kohara Y, Naoe Y, Watanabe A, Ito M, Ikeda K, Takeshita S.

J Bone Miner Res. 2018 Apr 6. doi: 10.1002/jbmr.3436. [Epub ahead of print]

PMID:
29624737
3.

Bortezomib maintenance therapy in transplant-ineligible myeloma patients who plateaued after bortezomib-based induction therapy: a multicenter phase II clinical trial.

Isoda A, Murayama K, Ito S, Kohara Y, Iino M, Miyazawa Y, Matsumoto M, Handa H, Imai Y, Ishiguro T, Izumita W, Kitano K, Hirabayashi Y, Nakazawa H, Ishida F, Mitsumori T, Kirito K, Chou T, Murakami H; Kanshinetsu Multiple Myeloma Study Group.

Int J Hematol. 2018 Jul;108(1):39-46. doi: 10.1007/s12185-018-2448-9. Epub 2018 Mar 28.

PMID:
29594921
4.

Differences in the genetic control of early egg development and reproduction between C. elegans and its parthenogenetic relative D. coronatus.

Kraus C, Schiffer PH, Kagoshima H, Hiraki H, Vogt T, Kroiher M, Kohara Y, Schierenberg E.

Evodevo. 2017 Oct 18;8:16. doi: 10.1186/s13227-017-0081-y. eCollection 2017.

5.

Anatomical integration of the sacral-hindlimb unit coordinated by GDF11 underlies variation in hindlimb positioning in tetrapods.

Matsubara Y, Hirasawa T, Egawa S, Hattori A, Suganuma T, Kohara Y, Nagai T, Tamura K, Kuratani S, Kuroiwa A, Suzuki T.

Nat Ecol Evol. 2017 Sep;1(9):1392-1399. doi: 10.1038/s41559-017-0247-y. Epub 2017 Jul 31.

PMID:
29046533
6.

MicroRNA Detection by Whole-Mount In Situ Hybridization in C. elegans.

Andachi Y, Kohara Y.

Methods Mol Biol. 2018;1680:75-86. doi: 10.1007/978-1-4939-7339-2_5.

PMID:
29030842
7.

Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.

Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, Balasubrmanian S, Barry K, Bauer D, Boehm CR, Briginshaw L, Caballero-Perez J, Catarino B, Chen F, Chiyoda S, Chovatia M, Davies KM, Delmans M, Demura T, Dierschke T, Dolan L, Dorantes-Acosta AE, Eklund DM, Florent SN, Flores-Sandoval E, Fujiyama A, Fukuzawa H, Galik B, Grimanelli D, Grimwood J, Grossniklaus U, Hamada T, Haseloff J, Hetherington AJ, Higo A, Hirakawa Y, Hundley HN, Ikeda Y, Inoue K, Inoue SI, Ishida S, Jia Q, Kakita M, Kanazawa T, Kawai Y, Kawashima T, Kennedy M, Kinose K, Kinoshita T, Kohara Y, Koide E, Komatsu K, Kopischke S, Kubo M, Kyozuka J, Lagercrantz U, Lin SS, Lindquist E, Lipzen AM, Lu CW, De Luna E, Martienssen RA, Minamino N, Mizutani M, Mizutani M, Mochizuki N, Monte I, Mosher R, Nagasaki H, Nakagami H, Naramoto S, Nishitani K, Ohtani M, Okamoto T, Okumura M, Phillips J, Pollak B, Reinders A, Rövekamp M, Sano R, Sawa S, Schmid MW, Shirakawa M, Solano R, Spunde A, Suetsugu N, Sugano S, Sugiyama A, Sun R, Suzuki Y, Takenaka M, Takezawa D, Tomogane H, Tsuzuki M, Ueda T, Umeda M, Ward JM, Watanabe Y, Yazaki K, Yokoyama R, Yoshitake Y, Yotsui I, Zachgo S, Schmutz J.

Cell. 2017 Oct 5;171(2):287-304.e15. doi: 10.1016/j.cell.2017.09.030.

8.

Genome analysis of Diploscapter coronatus: insights into molecular peculiarities of a nematode with parthenogenetic reproduction.

Hiraki H, Kagoshima H, Kraus C, Schiffer PH, Ueta Y, Kroiher M, Schierenberg E, Kohara Y.

BMC Genomics. 2017 Jun 24;18(1):478. doi: 10.1186/s12864-017-3860-x.

9.

Parallel Evaluation of Melting Temperatures of DNAs in the Arrayed Droplets through the Fluorescence from DNA Intercalators.

Shimazaki Y, Tanaka J, Kohara Y, Kamahori M, Sakamoto T.

Anal Chem. 2017 Jun 20;89(12):6305-6308. doi: 10.1021/acs.analchem.7b01343. Epub 2017 Jun 7.

PMID:
28590119
10.

Thinning of articular cartilage after joint unloading or immobilization. An experimental investigation of the pathogenesis in mice.

Nomura M, Sakitani N, Iwasawa H, Kohara Y, Takano S, Wakimoto Y, Kuroki H, Moriyama H.

Osteoarthritis Cartilage. 2017 May;25(5):727-736. doi: 10.1016/j.joca.2016.11.013. Epub 2016 Dec 1.

11.

Genome sequence and analysis of the Japanese morning glory Ipomoea nil.

Hoshino A, Jayakumar V, Nitasaka E, Toyoda A, Noguchi H, Itoh T, Shin-I T, Minakuchi Y, Koda Y, Nagano AJ, Yasugi M, Honjo MN, Kudoh H, Seki M, Kamiya A, Shiraki T, Carninci P, Asamizu E, Nishide H, Tanaka S, Park KI, Morita Y, Yokoyama K, Uchiyama I, Tanaka Y, Tabata S, Shinozaki K, Hayashizaki Y, Kohara Y, Suzuki Y, Sugano S, Fujiyama A, Iida S, Sakakibara Y.

Nat Commun. 2016 Nov 8;7:13295. doi: 10.1038/ncomms13295.

12.

Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein.

Hashimoto T, Horikawa DD, Saito Y, Kuwahara H, Kozuka-Hata H, Shin-I T, Minakuchi Y, Ohishi K, Motoyama A, Aizu T, Enomoto A, Kondo K, Tanaka S, Hara Y, Koshikawa S, Sagara H, Miura T, Yokobori SI, Miyagawa K, Suzuki Y, Kubo T, Oyama M, Kohara Y, Fujiyama A, Arakawa K, Katayama T, Toyoda A, Kunieda T.

Nat Commun. 2016 Sep 20;7:12808. doi: 10.1038/ncomms12808.

13.

Distribution of type VI collagen in association with osteoblast lineages in the groove of Ranvier during rat postnatal development.

Kohara Y, Soeta S, Izu Y, Arai K, Amasaki H.

Ann Anat. 2016 Nov;208:58-68. doi: 10.1016/j.aanat.2016.07.003. Epub 2016 Aug 3.

PMID:
27498042
14.

Denervation-Associated Change in the Palatinus and Levator Veli Palatini Muscles of Dogs with Elongated Soft Palate.

Arai K, Takahashi K, Yasuda A, Kanno N, Kohara Y, Michishita M, Harada Y, Hara Y.

J Comp Pathol. 2016 Aug-Oct;155(2-3):199-206. doi: 10.1016/j.jcpa.2016.06.010. Epub 2016 Jul 15.

PMID:
27426002
15.

A whole-mount in situ hybridization method for microRNA detection in Caenorhabditis elegans.

Andachi Y, Kohara Y.

RNA. 2016 Jul;22(7):1099-106. doi: 10.1261/rna.054239.115. Epub 2016 May 6.

16.

Discovery of 5-Chloro-1-(5-chloro-2-(methylsulfonyl)benzyl)-2-imino-1,2-dihydropyridine-3-carboxamide (TAK-259) as a Novel, Selective, and Orally Active α1D Adrenoceptor Antagonist with Antiurinary Frequency Effects: Reducing Human Ether-a-go-go-Related Gene (hERG) Liabilities.

Sakauchi N, Kohara Y, Sato A, Suzaki T, Imai Y, Okabe Y, Imai S, Saikawa R, Nagabukuro H, Kuno H, Fujita H, Kamo I, Yoshida M.

J Med Chem. 2016 Apr 14;59(7):2989-3002. doi: 10.1021/acs.jmedchem.5b01528. Epub 2016 Mar 17.

PMID:
26954848
17.

Perinatal Exposure to Low-dose Nonylphenol Specifically Improves Spatial Learning and Memory in Male Rat Offspring.

Kawaguchi S, Kuwahara R, Kohara Y, Uchida Y, Oku Y, Yamashita K.

Indian J Physiol Pharmacol. 2015 Apr-Jun;59(2):211-22.

PMID:
26685511
18.

Pathological study of chronic pulmonary toxicity induced by intratracheally instilled Asian sand dust (Kosa): possible association of fibrosis with the development of granulomatous lesions.

Shimada A, Kohara Y, Naota M, Kobayashi Y, Morita T, Inoue K, Takano H.

Folia Histochem Cytobiol. 2015;53(4):294-306. doi: 10.5603/fhc.a2015.0030. Epub 2015 Nov 30.

19.

A case of spontaneous myocardial necrosis and cerebral ischemic lesions in a laboratory beagle dog.

Matsushita K, Kohara Y, Ito Y, Yoshikawa T, Sato M, Kitaura K, Matsumoto S.

J Toxicol Pathol. 2015 Oct;28(4):233-6. doi: 10.1293/tox.2015-0024. Epub 2015 Aug 18. Erratum in: J Toxicol Pathol. 2016 Jan;29(1):74.

20.

Characterization of a novel gene involved in cadmium accumulation screened from sponge-associated bacterial metagenome.

Mori T, Iwamoto K, Wakaoji S, Araie H, Kohara Y, Okamura Y, Shiraiwa Y, Takeyama H.

Gene. 2016 Feb 1;576(2 Pt 1):618-25. doi: 10.1016/j.gene.2015.10.018. Epub 2015 Oct 17.

PMID:
26484790
21.

Caenorhabditis elegans glp-4 Encodes a Valyl Aminoacyl tRNA Synthetase.

Rastogi S, Borgo B, Pazdernik N, Fox P, Mardis ER, Kohara Y, Havranek J, Schedl T.

G3 (Bethesda). 2015 Oct 13;5(12):2719-28. doi: 10.1534/g3.115.021899.

22.

Accumulation of type VI collagen in the primary osteon of the rat femur during postnatal development.

Kohara Y, Soeta S, Izu Y, Amasaki H.

J Anat. 2015 May;226(5):478-88. doi: 10.1111/joa.12296. Epub 2015 May 5.

23.

Comparative genome and transcriptome analyses of the social amoeba Acytostelium subglobosum that accomplishes multicellular development without germ-soma differentiation.

Urushihara H, Kuwayama H, Fukuhara K, Itoh T, Kagoshima H, Shin-I T, Toyoda A, Ohishi K, Taniguchi T, Noguchi H, Kuroki Y, Hata T, Uchi K, Mohri K, King JS, Insall RH, Kohara Y, Fujiyama A.

BMC Genomics. 2015 Feb 14;16:80. doi: 10.1186/s12864-015-1278-x.

24.

Co-expression of the transcription factors CEH-14 and TTX-1 regulates AFD neuron-specific genes gcy-8 and gcy-18 in C. elegans.

Kagoshima H, Kohara Y.

Dev Biol. 2015 Mar 15;399(2):325-36. doi: 10.1016/j.ydbio.2015.01.010. Epub 2015 Jan 19.

25.

Analysis of genetic code ambiguity arising from nematode-specific misacylated tRNAs.

Hamashima K, Mori M, Andachi Y, Tomita M, Kohara Y, Kanai A.

PLoS One. 2015 Jan 20;10(1):e0116981. doi: 10.1371/journal.pone.0116981. eCollection 2015.

26.

Oral exposure to low-dose of nonylphenol impairs memory performance in Sprague-Dawley rats.

Kawaguchi S, Kuwahara R, Kohara Y, Uchida Y, Oku Y, Yamashita K.

J Toxicol Sci. 2015 Feb;40(1):43-53.

27.

Genistein improves spatial learning and memory in male rats with elevated glucose level during memory consolidation.

Kohara Y, Kawaguchi S, Kuwahara R, Uchida Y, Oku Y, Yamashita K.

Physiol Behav. 2015 Mar 1;140:15-22. doi: 10.1016/j.physbeh.2014.12.005. Epub 2014 Dec 4.

PMID:
25481356
28.

Conjunctival expression of the P2Y2 receptor and the effects of 3% diquafosol ophthalmic solution in dogs.

Terakado K, Yogo T, Kohara Y, Soeta S, Nezu Y, Harada Y, Hara Y, Amasaki H, Tagawa M.

Vet J. 2014 Oct;202(1):48-52. doi: 10.1016/j.tvjl.2014.05.022. Epub 2014 May 22.

PMID:
25178686
29.

A cDNA resource for gene expression studies of a hemichordate, Ptychodera flava.

Tagawa K, Arimoto A, Sasaki A, Izumi M, Fujita S, Humphreys T, Fujiyama A, Kagoshima H, Shin-I T, Kohara Y, Satoh N, Kawashima T.

Zoolog Sci. 2014 Jul;31(7):414-20. doi: 10.2108/zs130262. Erratum in: Zoolog Sci. 2014 Dec;31(12):862. Arimito, Asuka [corrected to Arimoto, Asuka].

PMID:
25001912
30.

Co-option of Sox3 as the male-determining factor on the Y chromosome in the fish Oryzias dancena.

Takehana Y, Matsuda M, Myosho T, Suster ML, Kawakami K, Shin-I T, Kohara Y, Kuroki Y, Toyoda A, Fujiyama A, Hamaguchi S, Sakaizumi M, Naruse K.

Nat Commun. 2014 Jun 20;5:4157. doi: 10.1038/ncomms5157.

PMID:
24948391
31.

Spontaneous nephroblastoma with lung metastasis in a rat.

Ito Y, Matsushita K, Tsuchiya T, Kohara Y, Yoshikawa T, Sato M, Kitaura K, Matsumoto S.

J Toxicol Pathol. 2014 Apr;27(1):91-5. doi: 10.1293/tox.2013-0059. Epub 2014 Apr 30.

32.

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.

Kajitani R, Toshimoto K, Noguchi H, Toyoda A, Ogura Y, Okuno M, Yabana M, Harada M, Nagayasu E, Maruyama H, Kohara Y, Fujiyama A, Hayashi T, Itoh T.

Genome Res. 2014 Aug;24(8):1384-95. doi: 10.1101/gr.170720.113. Epub 2014 Apr 22.

33.

Population survey of phytoseiid mites and spider mites on peach leaves and wild plants in Japanese peach orchard.

Wari D, Yamashita J, Kataoka Y, Kohara Y, Hinomoto N, Kishimoto H, Toyoshima S, Sonoda S.

Exp Appl Acarol. 2014 Jul;63(3):313-32.

PMID:
24659516
34.

Perinatal exposure to genistein, a soy phytoestrogen, improves spatial learning and memory but impairs passive avoidance learning and memory in offspring.

Kohara Y, Kuwahara R, Kawaguchi S, Jojima T, Yamashita K.

Physiol Behav. 2014 May 10;130:40-6. doi: 10.1016/j.physbeh.2014.03.006. Epub 2014 Mar 15.

PMID:
24637062
35.

Genomic analyses of sodium channel α-subunit genes from strains of melon thrips, Thrips palmi, with different sensitivities to cypermethrin.

Bao WX, Kataoka Y, Kohara Y, Sonoda S.

Pestic Biochem Physiol. 2014 Jan;108:80-5. doi: 10.1016/j.pestbp.2013.12.009. Epub 2014 Jan 8.

PMID:
24485319
36.

Bisphenol A does not affect memory performance in adult male rats.

Kuwahara R, Kawaguchi S, Kohara Y, Jojima T, Yamashita K.

Cell Mol Neurobiol. 2014 Apr;34(3):333-42. doi: 10.1007/s10571-013-0017-6. Epub 2013 Dec 11.

PMID:
24326521
37.

Perinatal exposure to low-dose bisphenol A impairs spatial learning and memory in male rats.

Kuwahara R, Kawaguchi S, Kohara Y, Cui H, Yamashita K.

J Pharmacol Sci. 2013;123(2):132-9. Epub 2013 Sep 27.

38.

Coelacanth genomes reveal signatures for evolutionary transition from water to land.

Nikaido M, Noguchi H, Nishihara H, Toyoda A, Suzuki Y, Kajitani R, Suzuki H, Okuno M, Aibara M, Ngatunga BP, Mzighani SI, Kalombo HW, Masengi KW, Tuda J, Nogami S, Maeda R, Iwata M, Abe Y, Fujimura K, Okabe M, Amano T, Maeno A, Shiroishi T, Itoh T, Sugano S, Kohara Y, Fujiyama A, Okada N.

Genome Res. 2013 Oct;23(10):1740-8. doi: 10.1101/gr.158105.113. Epub 2013 Jul 22.

39.

The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains.

Takada T, Ebata T, Noguchi H, Keane TM, Adams DJ, Narita T, Shin-I T, Fujisawa H, Toyoda A, Abe K, Obata Y, Sakaki Y, Moriwaki K, Fujiyama A, Kohara Y, Shiroishi T.

Genome Res. 2013 Aug;23(8):1329-38. doi: 10.1101/gr.156497.113. Epub 2013 Apr 19.

40.

Mutations in cell elongation genes mreB, mrdA and mrdB suppress the shape defect of RodZ-deficient cells.

Shiomi D, Toyoda A, Aizu T, Ejima F, Fujiyama A, Shini T, Kohara Y, Niki H.

Mol Microbiol. 2013 Mar;87(5):1029-44. doi: 10.1111/mmi.12148. Epub 2013 Jan 21.

41.

Marked depletion of the water-channel protein, AQP5, in the canine nictitating membrane glands might contribute to the development of KCS.

Terakado K, Yogo T, Kohara Y, Soeta S, Nezu Y, Harada Y, Hara Y, Amasaki H, Tagawa M.

Vet Pathol. 2013 Jul;50(4):664-7. doi: 10.1177/0300985812467467. Epub 2012 Nov 16.

PMID:
23160543
42.

Multi-decadal survival of an Antarctic nematode, Plectus murrayi, in a -20°C stored moss sample.

Kagoshima H, Kito K, Aizu T, Shin-i T, Kanda H, Kobayashi S, Toyoda A, Fujiyama A, Kohara Y, Convey P, Niki H.

Cryo Letters. 2012 Jul-Aug;33(4):280-8.

PMID:
22987239
43.
44.

Pathological study of chronic pulmonary toxicity induced by intratracheally instilled Asian sand dust (kosa).

Naota M, Shiotsu S, Shimada A, Kohara Y, Morita T, Inoue K, Takano H.

Toxicol Pathol. 2013 Jan;41(1):48-62. doi: 10.1177/0192623312452490. Epub 2012 Jun 28.

PMID:
22744225
45.

A genomic overview of short genetic variations in a basal chordate, Ciona intestinalis.

Satou Y, Shin-i T, Kohara Y, Satoh N, Chiba S.

BMC Genomics. 2012 May 30;13:208. doi: 10.1186/1471-2164-13-208.

46.

C. elegans VANG-1 modulates life span via insulin/IGF-1-like signaling.

Honnen SJ, Büchter C, Schröder V, Hoffmann M, Kohara Y, Kampkötter A, Bossinger O.

PLoS One. 2012;7(2):e32183. doi: 10.1371/journal.pone.0032183. Epub 2012 Feb 16.

47.

Comprehensive functional analyses of expressed sequence tags in common wheat (Triticum aestivum).

Manickavelu A, Kawaura K, Oishi K, Shin-I T, Kohara Y, Yahiaoui N, Keller B, Abe R, Suzuki A, Nagayama T, Yano K, Ogihara Y.

DNA Res. 2012 Apr;19(2):165-77. doi: 10.1093/dnares/dss001. Epub 2012 Feb 14.

48.

Molecular cloning and characterization of the repetitive DNA sequences that comprise the constitutive heterochromatin of the W chromosomes of medaka fishes.

Takehana Y, Naruse K, Asada Y, Matsuda Y, Shin-I T, Kohara Y, Fujiyama A, Hamaguchi S, Sakaizumi M.

Chromosome Res. 2012 Jan;20(1):71-81. doi: 10.1007/s10577-011-9259-7.

PMID:
22124859
49.

Phytoseiid mite species composition in Japanese peach orchards estimated using quantitative sequencing.

Sonoda S, Kohara Y, Siqingerile, Toyoshima S, Kishimoto H, Hinomoto N.

Exp Appl Acarol. 2012 Jan;56(1):9-22. doi: 10.1007/s10493-011-9485-x. Epub 2011 Sep 10.

PMID:
21909824
50.

Linear porokeratosis with nail dystrophy.

Kohara Y, Takeo T, Oshima Y, Akita Y, Tamada Y, Watanabe D.

Eur J Dermatol. 2011 Jul-Aug;21(4):625-6. doi: 10.1684/ejd.2011.1393. No abstract available.

PMID:
21697042

Supplemental Content

Loading ...
Support Center