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Items: 32

1.

Structure of the 30S ribosomal decoding complex at ambient temperature.

Dao EH, Poitevin F, Sierra RG, Gati C, Rao Y, Ciftci HI, Akşit F, McGurk A, Obrinski T, Mgbam P, Hayes B, DE Lichtenberg C, Pardo-Avila F, Corsepius N, Zhang L, Seaberg MH, Hunter MS, Liang M, Koglin JE, Wakatsuki S, Demirci H.

RNA. 2018 Aug 23. pii: rna.067660.118. doi: 10.1261/rna.067660.118. [Epub ahead of print]

2.

Ultrafast nonthermal heating of water initiated by an X-ray Free-Electron Laser.

Beyerlein KR, Jönsson HO, Alonso-Mori R, Aquila A, Bajt S, Barty A, Bean R, Koglin JE, Messerschmidt M, Ragazzon D, Sokaras D, Williams GJ, Hau-Riege S, Boutet S, Chapman HN, Tîmneanu N, Caleman C.

Proc Natl Acad Sci U S A. 2018 May 29;115(22):5652-5657. doi: 10.1073/pnas.1711220115. Epub 2018 May 14.

PMID:
29760050
3.

Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.

Coquelle N, Sliwa M, Woodhouse J, Schirò G, Adam V, Aquila A, Barends TRM, Boutet S, Byrdin M, Carbajo S, De la Mora E, Doak RB, Feliks M, Fieschi F, Foucar L, Guillon V, Hilpert M, Hunter MS, Jakobs S, Koglin JE, Kovacsova G, Lane TJ, Lévy B, Liang M, Nass K, Ridard J, Robinson JS, Roome CM, Ruckebusch C, Seaberg M, Thepaut M, Cammarata M, Demachy I, Field M, Shoeman RL, Bourgeois D, Colletier JP, Schlichting I, Weik M.

Nat Chem. 2018 Jan;10(1):31-37. doi: 10.1038/nchem.2853. Epub 2017 Sep 11.

PMID:
29256511
4.

Flow-aligned, single-shot fiber diffraction using a femtosecond X-ray free-electron laser.

Popp D, Loh ND, Zorgati H, Ghoshdastider U, Liow LT, Ivanova MI, Larsson M, DePonte DP, Bean R, Beyerlein KR, Gati C, Oberthuer D, Arnlund D, Brändén G, Berntsen P, Cascio D, Chavas LMG, Chen JPJ, Ding K, Fleckenstein H, Gumprecht L, Harimoorthy R, Mossou E, Sawaya MR, Brewster AS, Hattne J, Sauter NK, Seibert M, Seuring C, Stellato F, Tilp T, Eisenberg DS, Messerschmidt M, Williams GJ, Koglin JE, Makowski L, Millane RP, Forsyth T, Boutet S, White TA, Barty A, Chapman H, Chen SL, Liang M, Neutze R, Robinson RC.

Cytoskeleton (Hoboken). 2017 Dec;74(12):472-481. doi: 10.1002/cm.21378. Epub 2017 Jun 19.

PMID:
28574190
5.

Femtosecond response of polyatomic molecules to ultra-intense hard X-rays.

Rudenko A, Inhester L, Hanasaki K, Li X, Robatjazi SJ, Erk B, Boll R, Toyota K, Hao Y, Vendrell O, Bomme C, Savelyev E, Rudek B, Foucar L, Southworth SH, Lehmann CS, Kraessig B, Marchenko T, Simon M, Ueda K, Ferguson KR, Bucher M, Gorkhover T, Carron S, Alonso-Mori R, Koglin JE, Correa J, Williams GJ, Boutet S, Young L, Bostedt C, Son SK, Santra R, Rolles D.

Nature. 2017 Jun 1;546(7656):129-132. doi: 10.1038/nature22373. Epub 2017 May 31.

PMID:
28569799
6.

Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin.

Yoon CH, DeMirci H, Sierra RG, Dao EH, Ahmadi R, Aksit F, Aquila AL, Batyuk A, Ciftci H, Guillet S, Hayes MJ, Hayes B, Lane TJ, Liang M, Lundström U, Koglin JE, Mgbam P, Rao Y, Rendahl T, Rodriguez E, Zhang L, Wakatsuki S, Boutet S, Holton JM, Hunter MS.

Sci Data. 2017 Apr 25;4:170055. doi: 10.1038/sdata.2017.55.

7.

Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers.

Fuller FD, Gul S, Chatterjee R, Burgie ES, Young ID, Lebrette H, Srinivas V, Brewster AS, Michels-Clark T, Clinger JA, Andi B, Ibrahim M, Pastor E, de Lichtenberg C, Hussein R, Pollock CJ, Zhang M, Stan CA, Kroll T, Fransson T, Weninger C, Kubin M, Aller P, Lassalle L, Bräuer P, Miller MD, Amin M, Koroidov S, Roessler CG, Allaire M, Sierra RG, Docker PT, Glownia JM, Nelson S, Koglin JE, Zhu D, Chollet M, Song S, Lemke H, Liang M, Sokaras D, Alonso-Mori R, Zouni A, Messinger J, Bergmann U, Boal AK, Bollinger JM Jr, Krebs C, Högbom M, Phillips GN Jr, Vierstra RD, Sauter NK, Orville AM, Kern J, Yachandra VK, Yano J.

Nat Methods. 2017 Apr;14(4):443-449. doi: 10.1038/nmeth.4195. Epub 2017 Feb 27.

8.

Structure of photosystem II and substrate binding at room temperature.

Young ID, Ibrahim M, Chatterjee R, Gul S, Fuller F, Koroidov S, Brewster AS, Tran R, Alonso-Mori R, Kroll T, Michels-Clark T, Laksmono H, Sierra RG, Stan CA, Hussein R, Zhang M, Douthit L, Kubin M, de Lichtenberg C, Long Vo P, Nilsson H, Cheah MH, Shevela D, Saracini C, Bean MA, Seuffert I, Sokaras D, Weng TC, Pastor E, Weninger C, Fransson T, Lassalle L, Bräuer P, Aller P, Docker PT, Andi B, Orville AM, Glownia JM, Nelson S, Sikorski M, Zhu D, Hunter MS, Lane TJ, Aquila A, Koglin JE, Robinson J, Liang M, Boutet S, Lyubimov AY, Uervirojnangkoorn M, Moriarty NW, Liebschner D, Afonine PV, Waterman DG, Evans G, Wernet P, Dobbek H, Weis WI, Brunger AT, Zwart PH, Adams PD, Zouni A, Messinger J, Bergmann U, Sauter NK, Kern J, Yachandra VK, Yano J.

Nature. 2016 Dec 15;540(7633):453-457. doi: 10.1038/nature20161. Epub 2016 Nov 21.

9.

Selenium single-wavelength anomalous diffraction de novo phasing using an X-ray-free electron laser.

Hunter MS, Yoon CH, DeMirci H, Sierra RG, Dao EH, Ahmadi R, Aksit F, Aquila AL, Ciftci H, Guillet S, Hayes MJ, Lane TJ, Liang M, Lundström U, Koglin JE, Mgbam P, Rao Y, Zhang L, Wakatsuki S, Holton JM, Boutet S.

Nat Commun. 2016 Nov 4;7:13388. doi: 10.1038/ncomms13388.

10.

De novo phasing with X-ray laser reveals mosquito larvicide BinAB structure.

Colletier JP, Sawaya MR, Gingery M, Rodriguez JA, Cascio D, Brewster AS, Michels-Clark T, Hice RH, Coquelle N, Boutet S, Williams GJ, Messerschmidt M, DePonte DP, Sierra RG, Laksmono H, Koglin JE, Hunter MS, Park HW, Uervirojnangkoorn M, Bideshi DK, Brunger AT, Federici BA, Sauter NK, Eisenberg DS.

Nature. 2016 Nov 3;539(7627):43-47. doi: 10.1038/nature19825. Epub 2016 Sep 28.

11.

Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography.

Nogly P, Panneels V, Nelson G, Gati C, Kimura T, Milne C, Milathianaki D, Kubo M, Wu W, Conrad C, Coe J, Bean R, Zhao Y, Båth P, Dods R, Harimoorthy R, Beyerlein KR, Rheinberger J, James D, DePonte D, Li C, Sala L, Williams GJ, Hunter MS, Koglin JE, Berntsen P, Nango E, Iwata S, Chapman HN, Fromme P, Frank M, Abela R, Boutet S, Barty A, White TA, Weierstall U, Spence J, Neutze R, Schertler G, Standfuss J.

Nat Commun. 2016 Aug 22;7:12314. doi: 10.1038/ncomms12314.

12.

Serial femtosecond crystallography datasets from G protein-coupled receptors.

White TA, Barty A, Liu W, Ishchenko A, Zhang H, Gati C, Zatsepin NA, Basu S, Oberthür D, Metz M, Beyerlein KR, Yoon CH, Yefanov OM, James D, Wang D, Messerschmidt M, Koglin JE, Boutet S, Weierstall U, Cherezov V.

Sci Data. 2016 Aug 1;3:160057. doi: 10.1038/sdata.2016.57.

13.

Negative Pressures and Spallation in Water Drops Subjected to Nanosecond Shock Waves.

Stan CA, Willmott PR, Stone HA, Koglin JE, Liang M, Aquila AL, Robinson JS, Gumerlock KL, Blaj G, Sierra RG, Boutet S, Guillet SA, Curtis RH, Vetter SL, Loos H, Turner JL, Decker FJ.

J Phys Chem Lett. 2016 Jun 2;7(11):2055-62. doi: 10.1021/acs.jpclett.6b00687. Epub 2016 May 19.

PMID:
27182751
14.

Transient lattice contraction in the solid-to-plasma transition.

Ferguson KR, Bucher M, Gorkhover T, Boutet S, Fukuzawa H, Koglin JE, Kumagai Y, Lutman A, Marinelli A, Messerschmidt M, Nagaya K, Turner J, Ueda K, Williams GJ, Bucksbaum PH, Bostedt C.

Sci Adv. 2016 Jan 29;2(1):e1500837. doi: 10.1126/sciadv.1500837. eCollection 2016 Jan.

15.

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.

Pande K, Hutchison CD, Groenhof G, Aquila A, Robinson JS, Tenboer J, Basu S, Boutet S, DePonte DP, Liang M, White TA, Zatsepin NA, Yefanov O, Morozov D, Oberthuer D, Gati C, Subramanian G, James D, Zhao Y, Koralek J, Brayshaw J, Kupitz C, Conrad C, Roy-Chowdhury S, Coe JD, Metz M, Xavier PL, Grant TD, Koglin JE, Ketawala G, Fromme R, Šrajer V, Henning R, Spence JC, Ourmazd A, Schwander P, Weierstall U, Frank M, Fromme P, Barty A, Chapman HN, Moffat K, van Thor JJ, Schmidt M.

Science. 2016 May 6;352(6286):725-9. doi: 10.1126/science.aad5081. Epub 2016 May 5.

16.

Macromolecular diffractive imaging using imperfect crystals.

Ayyer K, Yefanov OM, Oberthür D, Roy-Chowdhury S, Galli L, Mariani V, Basu S, Coe J, Conrad CE, Fromme R, Schaffer A, Dörner K, James D, Kupitz C, Metz M, Nelson G, Xavier PL, Beyerlein KR, Schmidt M, Sarrou I, Spence JC, Weierstall U, White TA, Yang JH, Zhao Y, Liang M, Aquila A, Hunter MS, Robinson JS, Koglin JE, Boutet S, Fromme P, Barty A, Chapman HN.

Nature. 2016 Feb 11;530(7589):202-6. doi: 10.1038/nature16949.

17.

Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II.

Sierra RG, Gati C, Laksmono H, Dao EH, Gul S, Fuller F, Kern J, Chatterjee R, Ibrahim M, Brewster AS, Young ID, Michels-Clark T, Aquila A, Liang M, Hunter MS, Koglin JE, Boutet S, Junco EA, Hayes B, Bogan MJ, Hampton CY, Puglisi EV, Sauter NK, Stan CA, Zouni A, Yano J, Yachandra VK, Soltis SM, Puglisi JD, DeMirci H.

Nat Methods. 2016 Jan;13(1):59-62. doi: 10.1038/nmeth.3667. Epub 2015 Nov 30.

18.

Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.

Barends TR, Foucar L, Ardevol A, Nass K, Aquila A, Botha S, Doak RB, Falahati K, Hartmann E, Hilpert M, Heinz M, Hoffmann MC, Köfinger J, Koglin JE, Kovacsova G, Liang M, Milathianaki D, Lemke HT, Reinstein J, Roome CM, Shoeman RL, Williams GJ, Burghardt I, Hummer G, Boutet S, Schlichting I.

Science. 2015 Oct 23;350(6259):445-50. doi: 10.1126/science.aac5492. Epub 2015 Sep 10.

19.

A novel inert crystal delivery medium for serial femtosecond crystallography.

Conrad CE, Basu S, James D, Wang D, Schaffer A, Roy-Chowdhury S, Zatsepin NA, Aquila A, Coe J, Gati C, Hunter MS, Koglin JE, Kupitz C, Nelson G, Subramanian G, White TA, Zhao Y, Zook J, Boutet S, Cherezov V, Spence JC, Fromme R, Weierstall U, Fromme P.

IUCrJ. 2015 Jun 30;2(Pt 4):421-30. doi: 10.1107/S2052252515009811. eCollection 2015 Jul 1.

20.

Supernovae. ⁴⁴Ti gamma-ray emission lines from SN1987A reveal an asymmetric explosion.

Boggs SE, Harrison FA, Miyasaka H, Grefenstette BW, Zoglauer A, Fryer CL, Reynolds SP, Alexander DM, An H, Barret D, Christensen FE, Craig WW, Forster K, Giommi P, Hailey CJ, Hornstrup A, Kitaguchi T, Koglin JE, Madsen KK, Mao PH, Mori K, Perri M, Pivovaroff MJ, Puccetti S, Rana V, Stern D, Westergaard NJ, Zhang WW.

Science. 2015 May 8;348(6235):670-1. doi: 10.1126/science.aaa2259.

21.

Characterization and use of the spent beam for serial operation of LCLS.

Boutet S, Foucar L, Barends TR, Botha S, Doak RB, Koglin JE, Messerschmidt M, Nass K, Schlichting I, Seibert MM, Shoeman RL, Williams GJ.

J Synchrotron Radiat. 2015 May;22(3):634-43. doi: 10.1107/S1600577515004002. Epub 2015 Apr 11.

22.

The Coherent X-ray Imaging instrument at the Linac Coherent Light Source.

Liang M, Williams GJ, Messerschmidt M, Seibert MM, Montanez PA, Hayes M, Milathianaki D, Aquila A, Hunter MS, Koglin JE, Schafer DW, Guillet S, Busse A, Bergan R, Olson W, Fox K, Stewart N, Curtis R, Miahnahri AA, Boutet S.

J Synchrotron Radiat. 2015 May;22(3):514-9. doi: 10.1107/S160057751500449X. Epub 2015 Apr 15.

23.

Indications of radiation damage in ferredoxin microcrystals using high-intensity X-FEL beams.

Nass K, Foucar L, Barends TR, Hartmann E, Botha S, Shoeman RL, Doak RB, Alonso-Mori R, Aquila A, Bajt S, Barty A, Bean R, Beyerlein KR, Bublitz M, Drachmann N, Gregersen J, Jönsson HO, Kabsch W, Kassemeyer S, Koglin JE, Krumrey M, Mattle D, Messerschmidt M, Nissen P, Reinhard L, Sitsel O, Sokaras D, Williams GJ, Hau-Riege S, Timneanu N, Caleman C, Chapman HN, Boutet S, Schlichting I.

J Synchrotron Radiat. 2015 Mar;22(2):225-38. doi: 10.1107/S1600577515002349. Epub 2015 Feb 17.

PMID:
25723924
24.

Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.

Tenboer J, Basu S, Zatsepin N, Pande K, Milathianaki D, Frank M, Hunter M, Boutet S, Williams GJ, Koglin JE, Oberthuer D, Heymann M, Kupitz C, Conrad C, Coe J, Roy-Chowdhury S, Weierstall U, James D, Wang D, Grant T, Barty A, Yefanov O, Scales J, Gati C, Seuring C, Srajer V, Henning R, Schwander P, Fromme R, Ourmazd A, Moffat K, Van Thor JJ, Spence JC, Fromme P, Chapman HN, Schmidt M.

Science. 2014 Dec 5;346(6214):1242-6. doi: 10.1126/science.1259357.

25.

Protein crystal structure obtained at 2.9 Å resolution from injecting bacterial cells into an X-ray free-electron laser beam.

Sawaya MR, Cascio D, Gingery M, Rodriguez J, Goldschmidt L, Colletier JP, Messerschmidt MM, Boutet S, Koglin JE, Williams GJ, Brewster AS, Nass K, Hattne J, Botha S, Doak RB, Shoeman RL, DePonte DP, Park HW, Federici BA, Sauter NK, Schlichting I, Eisenberg DS.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12769-74. doi: 10.1073/pnas.1413456111. Epub 2014 Aug 18.

26.

Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.

Kern J, Tran R, Alonso-Mori R, Koroidov S, Echols N, Hattne J, Ibrahim M, Gul S, Laksmono H, Sierra RG, Gildea RJ, Han G, Hellmich J, Lassalle-Kaiser B, Chatterjee R, Brewster AS, Stan CA, Glöckner C, Lampe A, DiFiore D, Milathianaki D, Fry AR, Seibert MM, Koglin JE, Gallo E, Uhlig J, Sokaras D, Weng TC, Zwart PH, Skinner DE, Bogan MJ, Messerschmidt M, Glatzel P, Williams GJ, Boutet S, Adams PD, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK.

Nat Commun. 2014 Jul 9;5:4371. doi: 10.1038/ncomms5371.

27.

Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers.

Hattne J, Echols N, Tran R, Kern J, Gildea RJ, Brewster AS, Alonso-Mori R, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Lampe A, Han G, Gul S, DiFiore D, Milathianaki D, Fry AR, Miahnahri A, White WE, Schafer DW, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Glatzel P, Zwart PH, Grosse-Kunstleve RW, Bogan MJ, Messerschmidt M, Williams GJ, Boutet S, Messinger J, Zouni A, Yano J, Bergmann U, Yachandra VK, Adams PD, Sauter NK.

Nat Methods. 2014 May;11(5):545-8. doi: 10.1038/nmeth.2887. Epub 2014 Mar 16. Erratum in: Nat Methods. 2015 Jul;12(7):692.

28.

Asymmetries in core-collapse supernovae from maps of radioactive 44Ti in Cassiopeia A.

Grefenstette BW, Harrison FA, Boggs SE, Reynolds SP, Fryer CL, Madsen KK, Wik DR, Zoglauer A, Ellinger CI, Alexander DM, An H, Barret D, Christensen FE, Craig WW, Forster K, Giommi P, Hailey CJ, Hornstrup A, Kaspi VM, Kitaguchi T, Koglin JE, Mao PH, Miyasaka H, Mori K, Perri M, Pivovaroff MJ, Puccetti S, Rana V, Stern D, Westergaard NJ, Zhang WW.

Nature. 2014 Feb 20;506(7488):339-42. doi: 10.1038/nature12997.

PMID:
24553239
29.

Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.

Weierstall U, James D, Wang C, White TA, Wang D, Liu W, Spence JC, Bruce Doak R, Nelson G, Fromme P, Fromme R, Grotjohann I, Kupitz C, Zatsepin NA, Liu H, Basu S, Wacker D, Han GW, Katritch V, Boutet S, Messerschmidt M, Williams GJ, Koglin JE, Marvin Seibert M, Klinker M, Gati C, Shoeman RL, Barty A, Chapman HN, Kirian RA, Beyerlein KR, Stevens RC, Li D, Shah ST, Howe N, Caffrey M, Cherezov V.

Nat Commun. 2014;5:3309. doi: 10.1038/ncomms4309.

30.

Serial femtosecond crystallography of G protein-coupled receptors.

Liu W, Wacker D, Gati C, Han GW, James D, Wang D, Nelson G, Weierstall U, Katritch V, Barty A, Zatsepin NA, Li D, Messerschmidt M, Boutet S, Williams GJ, Koglin JE, Seibert MM, Wang C, Shah ST, Basu S, Fromme R, Kupitz C, Rendek KN, Grotjohann I, Fromme P, Kirian RA, Beyerlein KR, White TA, Chapman HN, Caffrey M, Spence JC, Stevens RC, Cherezov V.

Science. 2013 Dec 20;342(6165):1521-4. doi: 10.1126/science.1244142.

31.

De novo protein crystal structure determination from X-ray free-electron laser data.

Barends TR, Foucar L, Botha S, Doak RB, Shoeman RL, Nass K, Koglin JE, Williams GJ, Boutet S, Messerschmidt M, Schlichting I.

Nature. 2014 Jan 9;505(7482):244-7. doi: 10.1038/nature12773. Epub 2013 Nov 24.

PMID:
24270807
32.

Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.

Kern J, Alonso-Mori R, Tran R, Hattne J, Gildea RJ, Echols N, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Koroidov S, Lampe A, Han G, Gul S, Difiore D, Milathianaki D, Fry AR, Miahnahri A, Schafer DW, Messerschmidt M, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Grosse-Kunstleve RW, Zwart PH, White WE, Glatzel P, Adams PD, Bogan MJ, Williams GJ, Boutet S, Messinger J, Zouni A, Sauter NK, Yachandra VK, Bergmann U, Yano J.

Science. 2013 Apr 26;340(6131):491-5. doi: 10.1126/science.1234273. Epub 2013 Feb 14.

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