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Items: 23

1.

Avidity-based binding to HER2 results in selective killing of HER2-overexpressing cells by anti-HER2/CD3.

Slaga D, Ellerman D, Lombana TN, Vij R, Li J, Hristopoulos M, Clark R, Johnston J, Shelton A, Mai E, Gadkar K, Lo AA, Koerber JT, Totpal K, Prell R, Lee G, Spiess C, Junttila TT.

Sci Transl Med. 2018 Oct 17;10(463). pii: eaat5775. doi: 10.1126/scitranslmed.aat5775.

PMID:
30333240
2.

The Escherichia coli β-barrel assembly machinery is sensitized to perturbations under high membrane fluidity.

Storek KM, Vij R, Sun D, Smith PA, Koerber JT, Rutherford ST.

J Bacteriol. 2018 Oct 15. pii: JB.00517-18. doi: 10.1128/JB.00517-18. [Epub ahead of print]

3.

Analysis of the effect of promoter type and skin pretreatment on antigen expression and antibody response after gene gun-based immunization.

Vij R, Lin Z, Schneider K, Seshasayee D, Koerber JT.

PLoS One. 2018 Jun 1;13(6):e0197962. doi: 10.1371/journal.pone.0197962. eCollection 2018.

4.

A targeted boost-and-sort immunization strategy using Escherichia coli BamA identifies rare growth inhibitory antibodies.

Vij R, Lin Z, Chiang N, Vernes JM, Storek KM, Park S, Chan J, Meng YG, Comps-Agrar L, Luan P, Lee S, Schneider K, Bevers J 3rd, Zilberleyb I, Tam C, Koth CM, Xu M, Gill A, Auerbach MR, Smith PA, Rutherford ST, Nakamura G, Seshasayee D, Payandeh J, Koerber JT.

Sci Rep. 2018 May 8;8(1):7136. doi: 10.1038/s41598-018-25609-z.

5.

Monoclonal antibody targeting the β-barrel assembly machine of Escherichia coli is bactericidal.

Storek KM, Auerbach MR, Shi H, Garcia NK, Sun D, Nickerson NN, Vij R, Lin Z, Chiang N, Schneider K, Wecksler AT, Skippington E, Nakamura G, Seshasayee D, Koerber JT, Payandeh J, Smith PA, Rutherford ST.

Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):3692-3697. doi: 10.1073/pnas.1800043115. Epub 2018 Mar 19.

6.

An improved single-chain Fab platform for efficient display and recombinant expression.

Koerber JT, Hornsby MJ, Wells JA.

J Mol Biol. 2015 Jan 30;427(2):576-86. doi: 10.1016/j.jmb.2014.11.017. Epub 2014 Dec 3.

7.

Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis.

Ordureau A, Sarraf SA, Duda DM, Heo JM, Jedrychowski MP, Sviderskiy VO, Olszewski JL, Koerber JT, Xie T, Beausoleil SA, Wells JA, Gygi SP, Schulman BA, Harper JW.

Mol Cell. 2014 Nov 6;56(3):360-75. doi: 10.1016/j.molcel.2014.09.007. Epub 2014 Oct 2. Erratum in: Mol Cell. 2014 Nov 6;56(3):462.

8.

Nature-inspired design of motif-specific antibody scaffolds.

Koerber JT, Thomsen ND, Hannigan BT, Degrado WF, Wells JA.

Nat Biotechnol. 2013 Oct;31(10):916-21. doi: 10.1038/nbt.2672. Epub 2013 Aug 18.

9.

Structural snapshots reveal distinct mechanisms of procaspase-3 and -7 activation.

Thomsen ND, Koerber JT, Wells JA.

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8477-82. doi: 10.1073/pnas.1306759110. Epub 2013 May 6.

10.

Enhanced sialic acid-dependent endocytosis explains the increased efficiency of infection of airway epithelia by a novel adeno-associated virus.

Dickey DD, Excoffon KJ, Koerber JT, Bergen J, Steines B, Klesney-Tait J, Schaffer DV, Zabner J.

J Virol. 2011 Sep;85(17):9023-30. doi: 10.1128/JVI.05154-11. Epub 2011 Jun 22.

11.

An evolved adeno-associated viral variant enhances gene delivery and gene targeting in neural stem cells.

Jang JH, Koerber JT, Kim JS, Asuri P, Vazin T, Bartel M, Keung A, Kwon I, Park KI, Schaffer DV.

Mol Ther. 2011 Apr;19(4):667-75. doi: 10.1038/mt.2010.287. Epub 2011 Jan 11.

12.

Surface immobilization of hexa-histidine-tagged adeno-associated viral vectors for localized gene delivery.

Jang JH, Koerber JT, Gujraty K, Bethi SR, Kane RS, Schaffer DV.

Gene Ther. 2010 Nov;17(11):1384-9. doi: 10.1038/gt.2010.81. Epub 2010 May 27.

13.

A novel adeno-associated viral variant for efficient and selective intravitreal transduction of rat Müller cells.

Klimczak RR, Koerber JT, Dalkara D, Flannery JG, Schaffer DV.

PLoS One. 2009 Oct 14;4(10):e7467. doi: 10.1371/journal.pone.0007467.

14.

Molecular evolution of adeno-associated virus for enhanced glial gene delivery.

Koerber JT, Klimczak R, Jang JH, Dalkara D, Flannery JG, Schaffer DV.

Mol Ther. 2009 Dec;17(12):2088-95. doi: 10.1038/mt.2009.184. Epub 2009 Aug 11.

15.

Directed evolution of adeno-associated virus to an infectious respiratory virus.

Excoffon KJ, Koerber JT, Dickey DD, Murtha M, Keshavjee S, Kaspar BK, Zabner J, Schaffer DV.

Proc Natl Acad Sci U S A. 2009 Mar 10;106(10):3865-70. doi: 10.1073/pnas.0813365106. Epub 2009 Feb 23.

16.

DNA shuffling of adeno-associated virus yields functionally diverse viral progeny.

Koerber JT, Jang JH, Schaffer DV.

Mol Ther. 2008 Oct;16(10):1703-9. doi: 10.1038/mt.2008.167. Epub 2008 Aug 26.

17.

Molecular engineering of viral gene delivery vehicles.

Schaffer DV, Koerber JT, Lim KI.

Annu Rev Biomed Eng. 2008;10:169-94. doi: 10.1146/annurev.bioeng.10.061807.160514. Review.

18.

Transposon-based mutagenesis generates diverse adeno-associated viral libraries with novel gene delivery properties.

Koerber JT, Schaffer DV.

Methods Mol Biol. 2008;434:161-70. doi: 10.1007/978-1-60327-248-3_10.

PMID:
18470644
19.

Engineering adeno-associated virus for one-step purification via immobilized metal affinity chromatography.

Koerber JT, Jang JH, Yu JH, Kane RS, Schaffer DV.

Hum Gene Ther. 2007 Apr;18(4):367-78.

PMID:
17437357
20.

Construction of diverse adeno-associated viral libraries for directed evolution of enhanced gene delivery vehicles.

Koerber JT, Maheshri N, Kaspar BK, Schaffer DV.

Nat Protoc. 2006;1(2):701-6.

PMID:
17406299
21.

Directed evolution of adeno-associated virus yields enhanced gene delivery vectors.

Maheshri N, Koerber JT, Kaspar BK, Schaffer DV.

Nat Biotechnol. 2006 Feb;24(2):198-204. Epub 2006 Jan 22.

PMID:
16429148
22.

Partial acetylation of polyethylenimine enhances in vitro gene delivery.

Forrest ML, Meister GE, Koerber JT, Pack DW.

Pharm Res. 2004 Feb;21(2):365-71.

PMID:
15032320
23.

A degradable polyethylenimine derivative with low toxicity for highly efficient gene delivery.

Forrest ML, Koerber JT, Pack DW.

Bioconjug Chem. 2003 Sep-Oct;14(5):934-40.

PMID:
13129396

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