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Items: 1 to 50 of 406

1.

Imbibition of Femtoliter-Scale DNA-Rich Aqueous Droplets into Porous Nylon Substrates by Molecular Printing.

Arrabito G, Ferrara V, Ottaviani A, Cavaleri F, Cubisino S, Cancemi P, Ho YP, Knudsen BR, Hede MS, Pellerito C, Desideri A, Feo S, Pignataro B.

Langmuir. 2019 Dec 31;35(52):17156-17165. doi: 10.1021/acs.langmuir.9b02893. Epub 2019 Dec 17.

PMID:
31790261
2.

Topoisomerase I activity and sensitivity to camptothecin in breast cancer-derived cells: a comparative study.

Tesauro C, Simonsen AK, Andersen MB, Petersen KW, Kristoffersen EL, Algreen L, Hansen NY, Andersen AB, Jakobsen AK, Stougaard M, Gromov P, Knudsen BR, Gromova I.

BMC Cancer. 2019 Nov 29;19(1):1158. doi: 10.1186/s12885-019-6371-0.

3.

Predicting effects of changed antimicrobial usage on the abundance of antimicrobial resistance genes in finisher' gut microbiomes.

Andersen VD, Aarestrup FM, Munk P, Jensen MS, de Knegt LV, Bortolaia V, Knudsen BE, Lukjancenko O, Birkegård AC, Vigre H.

Prev Vet Med. 2020 Jan;174:104853. doi: 10.1016/j.prevetmed.2019.104853. Epub 2019 Nov 19.

4.

A “human-proof pointy-end”: a robotically applied hemostatic clamp for care-under-fire

McKee IA, McKee JL, Knudsen BE, Shelton R, LaPorta T, Wachs J, Kirkpatrick AW.

Can J Surg. 2019 Dec 1;62(6):E13-E15. doi: 10.1503/cjs.002619.

5.

An Injectable Neural Stimulation Electrode Made from an In-Body Curing Polymer/Metal Composite.

Trevathan JK, Baumgart IW, Nicolai EN, Gosink BA, Asp AJ, Settell ML, Polaconda SR, Malerick KD, Brodnick SK, Zeng W, Knudsen BE, McConico AL, Sanger Z, Lee JH, Aho JM, Suminski AJ, Ross EK, Lujan JL, Weber DJ, Williams JC, Franke M, Ludwig KA, Shoffstall AJ.

Adv Healthc Mater. 2019 Dec;8(23):e1900892. doi: 10.1002/adhm.201900892. Epub 2019 Nov 7.

PMID:
31697052
6.

Enzymatic activity in single cells.

Keller JG, Stougaard M, Knudsen BR.

Methods Enzymol. 2019;628:43-57. doi: 10.1016/bs.mie.2019.07.003. Epub 2019 Jul 25.

PMID:
31668235
7.

Centrosome loss results in an unstable genome and malignant prostate tumors.

Wang M, Nagle RB, Knudsen BS, Cress AE, Rogers GC.

Oncogene. 2020 Jan;39(2):399-413. doi: 10.1038/s41388-019-0995-z. Epub 2019 Sep 2.

PMID:
31477840
8.

Are We Cutting Ourselves Short? Laser Lithotripsy Performance Based on Differences in Fiber-tip Preparation.

Aldoukhi AH, Knudsen BE, Black KM, Hall TL, Roberts WW, Ghani KR.

Urology. 2019 Dec;134:79-83. doi: 10.1016/j.urology.2019.08.027. Epub 2019 Aug 30.

PMID:
31476349
9.

Single-Dose Neoadjuvant AKT Pathway Inhibitor Reduces Growth of Hepatocellular Carcinoma after Laser Thermal Ablation in Small-Animal Model.

Jondal DE, Thompson SM, Butters KA, Knudsen BE, Anderson JL, Roberts LR, Callstrom MR, Woodrum DA.

Radiology. 2019 Sep;292(3):752-759. doi: 10.1148/radiol.2019190115. Epub 2019 Jul 23.

PMID:
31335281
10.

A Circulating Tumor Cell-RNA Assay for Assessment of Androgen Receptor Signaling Inhibitor Sensitivity in Metastatic Castration-Resistant Prostate Cancer.

Jan YJ, Yoon J, Chen JF, Teng PC, Yao N, Cheng S, Lozano A, Chu GCY, Chung H, Lu YT, Chen PJ, Wang JJ, Lee YT, Kim M, Zhu Y, Knudsen BS, Feng FY, Garraway IP, Gao AC, Chung LWK, Freeman MR, You S, Tseng HR, Posadas EM.

Theranostics. 2019 Apr 13;9(10):2812-2826. doi: 10.7150/thno.34485. eCollection 2019.

11.

The microbiome of calcium-based urinary stones.

Dornbier RA, Bajic P, Van Kuiken M, Jardaneh A, Lin H, Gao X, Knudsen B, Dong Q, Wolfe AJ, Schwaderer AL.

Urolithiasis. 2019 Jun 25. doi: 10.1007/s00240-019-01146-w. [Epub ahead of print]

PMID:
31240349
12.

Associations between antimicrobial use and the faecal resistome on broiler farms from nine European countries.

Luiken REC, Van Gompel L, Munk P, Sarrazin S, Joosten P, Dorado-García A, Borup Hansen R, Knudsen BE, Bossers A, Wagenaar JA, Aarestrup FM, Dewulf J, Mevius DJ, Heederik DJJ, Smit LAM, Schmitt H; EFFORT consortium .

J Antimicrob Chemother. 2019 Sep 1;74(9):2596-2604. doi: 10.1093/jac/dkz235.

13.

Functional Ultrasound Imaging of Spinal Cord Hemodynamic Responses to Epidural Electrical Stimulation: A Feasibility Study.

Song P, Cuellar CA, Tang S, Islam R, Wen H, Huang C, Manduca A, Trzasko JD, Knudsen BE, Lee KH, Chen S, Lavrov IA.

Front Neurol. 2019 Mar 26;10:279. doi: 10.3389/fneur.2019.00279. eCollection 2019.

14.

Laser Fibers for Holmium:YAG Lithotripsy: What Is Important and What Is New.

Knudsen BE.

Urol Clin North Am. 2019 May;46(2):185-191. doi: 10.1016/j.ucl.2018.12.004. Review.

PMID:
30961852
15.

Evidence for Faster X Chromosome Evolution in Spiders.

Bechsgaard J, Schou MF, Vanthournout B, Hendrickx F, Knudsen B, Settepani V, Schierup MH, Bilde T.

Mol Biol Evol. 2019 Jun 1;36(6):1281-1293. doi: 10.1093/molbev/msz074.

16.

Clinical protein science in translational medicine targeting malignant melanoma.

Gil J, Betancourt LH, Pla I, Sanchez A, Appelqvist R, Miliotis T, Kuras M, Oskolas H, Kim Y, Horvath Z, Eriksson J, Berge E, Burestedt E, Jönsson G, Baldetorp B, Ingvar C, Olsson H, Lundgren L, Horvatovich P, Murillo JR, Sugihara Y, Welinder C, Wieslander E, Lee B, Lindberg H, Pawłowski K, Kwon HJ, Doma V, Timar J, Karpati S, Szasz AM, Németh IB, Nishimura T, Corthals G, Rezeli M, Knudsen B, Malm J, Marko-Varga G.

Cell Biol Toxicol. 2019 Aug;35(4):293-332. doi: 10.1007/s10565-019-09468-6. Epub 2019 Mar 21.

17.

Integrin α6β4E variant is associated with actin and CD9 structures and modifies the biophysical properties of cell-cell and cell-extracellular matrix interactions.

Wang M, Hinton JP, Gard JMC, Garcia JGN, Knudsen BS, Nagle RB, Cress AE.

Mol Biol Cell. 2019 Mar 21;30(7):838-850. doi: 10.1091/mbc.E18-10-0652. Epub 2019 Mar 13.

18.

Reducing Fluoroscopy Time in Percutaneous Nephrolithotomy.

Sourial MW, Todd AM, Palettas MS, Knudsen BE.

J Endourol. 2019 May;33(5):369-374. doi: 10.1089/end.2018.0837. Epub 2019 Apr 8.

PMID:
30838892
19.

Use of the Quick Sequential Organ Failure Assessment Score for Prediction of Intensive Care Unit Admission Due to Septic Shock after Percutaneous Nephrolithotomy: A Multicenter Study.

Yaghoubian A, Batter T, Mozafarpour S, Sacco D, Chew BH, Monga M, Krambeck A, Sur R, Knudsen B, Mikkilineni N, Shah O, Stern K, De S, Miller N, Broutian T, Sourial M, Large T, Scotland K, Lundeen C, Lange D, DiPina T, Bechis SK, Eisner BH; Edge Research Consortium.

J Urol. 2019 Aug;202(2):314-318. doi: 10.1097/JU.0000000000000195. Epub 2019 Jul 8.

PMID:
30829131
20.

Medical dissolution therapy for the treatment of uric acid nephrolithiasis.

Gridley CM, Sourial MW, Lehman A, Knudsen BE.

World J Urol. 2019 Nov;37(11):2509-2515. doi: 10.1007/s00345-019-02688-9. Epub 2019 Feb 27.

PMID:
30810833
21.

Convolutional neural networks can accurately distinguish four histologic growth patterns of lung adenocarcinoma in digital slides.

Gertych A, Swiderska-Chadaj Z, Ma Z, Ing N, Markiewicz T, Cierniak S, Salemi H, Guzman S, Walts AE, Knudsen BS.

Sci Rep. 2019 Feb 6;9(1):1483. doi: 10.1038/s41598-018-37638-9.

22.

A method of quantifying centrosomes at the single-cell level in human normal and cancer tissue.

Wang M, Knudsen BS, Nagle RB, Rogers GC, Cress AE.

Mol Biol Cell. 2019 Mar 21;30(7):811-819. doi: 10.1091/mbc.E18-10-0651. Epub 2019 Jan 30.

23.

The antimicrobial resistome in relation to antimicrobial use and biosecurity in pig farming, a metagenome-wide association study in nine European countries.

Van Gompel L, Luiken REC, Sarrazin S, Munk P, Knudsen BE, Hansen RB, Bossers A, Aarestrup FM, Dewulf J, Wagenaar JA, Mevius DJ, Schmitt H, Heederik DJJ, Dorado-García A, Smit LAM; EFFORT consortium .

J Antimicrob Chemother. 2019 Apr 1;74(4):865-876. doi: 10.1093/jac/dky518.

PMID:
30649386
24.

Spatial Mapping of Myeloid Cells and Macrophages by Multiplexed Tissue Staining.

Saylor J, Ma Z, Goodridge HS, Huang F, Cress AE, Pandol SJ, Shiao SL, Vidal AC, Wu L, Nickols NG, Gertych A, Knudsen BS.

Front Immunol. 2018 Dec 14;9:2925. doi: 10.3389/fimmu.2018.02925. eCollection 2018.

25.

Editorial Comment.

Knudsen BE.

Urology. 2019 Jan;123:51-52. doi: 10.1016/j.urology.2018.07.071. No abstract available.

PMID:
30598224
26.

A new DNA sensor system for specific and quantitative detection of mycobacteria.

Franch O, Han X, Marcussen LB, Givskov A, Andersen MB, Godbole AA, Harmsen C, Nørskov-Lauritsen N, Thomsen J, Pedersen FS, Wang Y, Shi D, Wejse C, Pødenphant L, Nagaraja V, Bertl J, Stougaard M, Ho YP, Hede MS, Labouriau R, Knudsen BR.

Nanoscale. 2019 Jan 3;11(2):587-597. doi: 10.1039/c8nr07850e.

PMID:
30556557
27.

Validation of the Decipher Test for predicting adverse pathology in candidates for prostate cancer active surveillance.

Kim HL, Li P, Huang HC, Deheshi S, Marti T, Knudsen B, Abou-Ouf H, Alam R, Lotan TL, Lam LLC, du Plessis M, Davicioni E, Fleshner N, Lane BR, Ross AE, Davis JW, Mohler JL, Trock BJ, Klein EA, Tosoian JJ, Hyndman ME, Bismar TA.

Prostate Cancer Prostatic Dis. 2019 Sep;22(3):399-405. doi: 10.1038/s41391-018-0101-6. Epub 2018 Dec 12.

28.

Procurement and Storage of Pleural and Peritoneal Fluids for Biobanking.

Marchevsky AM, Bose S, Knudsen B.

Methods Mol Biol. 2019;1897:125-133. doi: 10.1007/978-1-4939-8935-5_13. Review.

PMID:
30539441
29.

ONECUT2 is a targetable master regulator of lethal prostate cancer that suppresses the androgen axis.

Rotinen M, You S, Yang J, Coetzee SG, Reis-Sobreiro M, Huang WC, Huang F, Pan X, Yáñez A, Hazelett DJ, Chu CY, Steadman K, Morrissey CM, Nelson PS, Corey E, Chung LWK, Freedland SJ, Di Vizio D, Garraway IP, Murali R, Knudsen BS, Freeman MR.

Nat Med. 2018 Dec;24(12):1887-1898. doi: 10.1038/s41591-018-0241-1. Epub 2018 Nov 26.

30.

PARP-1 regulates DNA repair factor availability.

Schiewer MJ, Mandigo AC, Gordon N, Huang F, Gaur S, de Leeuw R, Zhao SG, Evans J, Han S, Parsons T, Birbe R, McCue P, McNair C, Chand SN, Cendon-Florez Y, Gallagher P, McCann JJ, Poudel Neupane N, Shafi AA, Dylgjeri E, Brand LJ, Visakorpi T, Raj GV, Lallas CD, Trabulsi EJ, Gomella LG, Dicker AP, Kelly WK, Leiby BE, Knudsen B, Feng FY, Knudsen KE.

EMBO Mol Med. 2018 Dec;10(12). pii: e8816. doi: 10.15252/emmm.201708816.

31.

Path R-CNN for Prostate Cancer Diagnosis and Gleason Grading of Histological Images.

Li W, Li J, Sarma KV, Ho KC, Shen S, Knudsen BS, Gertych A, Arnold CW.

IEEE Trans Med Imaging. 2019 Apr;38(4):945-954. doi: 10.1109/TMI.2018.2875868. Epub 2018 Oct 12.

PMID:
30334752
32.

Holmium-YAG laser: impact of pulse energy and frequency on local fluid temperature in an in-vitro obstructed kidney calyx model.

Sourial MW, Ebel J, Francois N, Box GN, Knudsen BE.

J Biomed Opt. 2018 Oct;23(10):1-4. doi: 10.1117/1.JBO.23.10.105002.

33.

Supracostal access tubeless percutaneous nephrolithotomy: minimizing complications.

Sourial MW, Francois N, Box GN, Knudsen BE.

World J Urol. 2019 Jul;37(7):1429-1433. doi: 10.1007/s00345-018-2518-x. Epub 2018 Oct 9.

PMID:
30302593
34.

Effect of Preanalytic Variables on an Automated PTEN Immunohistochemistry Assay for Prostate Cancer.

Guedes LB, Morais CL, Fedor H, Hicks J, Gurel B, Melamed J, Lee P, Gopalan A, Knudsen BS, True LD, Scher HI, Fine SW, Trock BJ, De Marzo AM, Lotan TL.

Arch Pathol Lab Med. 2019 Mar;143(3):338-348. doi: 10.5858/arpa.2018-0068-OA. Epub 2018 Oct 8.

PMID:
30295067
35.

An EM-based semi-supervised deep learning approach for semantic segmentation of histopathological images from radical prostatectomies.

Li J, Speier W, Ho KC, Sarma KV, Gertych A, Knudsen BS, Arnold CW.

Comput Med Imaging Graph. 2018 Nov;69:125-133. doi: 10.1016/j.compmedimag.2018.08.003. Epub 2018 Sep 3.

36.

Emerin Deregulation Links Nuclear Shape Instability to Metastatic Potential.

Reis-Sobreiro M, Chen JF, Novitskaya T, You S, Morley S, Steadman K, Gill NK, Eskaros A, Rotinen M, Chu CY, Chung LWK, Tanaka H, Yang W, Knudsen BS, Tseng HR, Rowat AC, Posadas EM, Zijlstra A, Di Vizio D, Freeman MR.

Cancer Res. 2018 Nov 1;78(21):6086-6097. doi: 10.1158/0008-5472.CAN-18-0608. Epub 2018 Aug 28.

37.

Author Correction: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM; EFFORT Group.

Nat Microbiol. 2018 Oct;3(10):1186. doi: 10.1038/s41564-018-0241-4.

PMID:
30131524
38.

The actin cytoskeletal architecture of estrogen receptor positive breast cancer cells suppresses invasion.

Padilla-Rodriguez M, Parker SS, Adams DG, Westerling T, Puleo JI, Watson AW, Hill SM, Noon M, Gaudin R, Aaron J, Tong D, Roe DJ, Knudsen B, Mouneimne G.

Nat Commun. 2018 Jul 30;9(1):2980. doi: 10.1038/s41467-018-05367-2.

39.

Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E; EFFORT Group, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM.

Nat Microbiol. 2018 Aug;3(8):898-908. doi: 10.1038/s41564-018-0192-9. Epub 2018 Jul 23. Erratum in: Nat Microbiol. 2018 Oct;3(10):1186.

PMID:
30038308
40.

Heat Stress and Thermal Ablation Induce Local Expression of Nerve Growth Factor Inducible (VGF) in Hepatocytes and Hepatocellular Carcinoma: Preclinical and Clinical Studies.

Thompson SM, Jondal DE, Butters KA, Knudsen BE, Anderson JL, Roberts LR, Callstrom MR, Woodrum DA.

Gene Expr. 2018 Dec 14;19(1):37-47. doi: 10.3727/105221618X15305531034617. Epub 2018 Jul 4.

41.

A precision oncology approach to the pharmacological targeting of mechanistic dependencies in neuroendocrine tumors.

Alvarez MJ, Subramaniam PS, Tang LH, Grunn A, Aburi M, Rieckhof G, Komissarova EV, Hagan EA, Bodei L, Clemons PA, Dela Cruz FS, Dhall D, Diolaiti D, Fraker DA, Ghavami A, Kaemmerer D, Karan C, Kidd M, Kim KM, Kim HC, Kunju LP, Langel Ü, Li Z, Lee J, Li H, LiVolsi V, Pfragner R, Rainey AR, Realubit RB, Remotti H, Regberg J, Roses R, Rustgi A, Sepulveda AR, Serra S, Shi C, Yuan X, Barberis M, Bergamaschi R, Chinnaiyan AM, Detre T, Ezzat S, Frilling A, Hommann M, Jaeger D, Kim MK, Knudsen BS, Kung AL, Leahy E, Metz DC, Milsom JW, Park YS, Reidy-Lagunes D, Schreiber S, Washington K, Wiedenmann B, Modlin I, Califano A.

Nat Genet. 2018 Jul;50(7):979-989. doi: 10.1038/s41588-018-0138-4. Epub 2018 Jun 18.

42.

A Multi-scale U-Net for Semantic Segmentation of Histological Images from Radical Prostatectomies.

Li J, Sarma KV, Chung Ho K, Gertych A, Knudsen BS, Arnold CW.

AMIA Annu Symp Proc. 2018 Apr 16;2017:1140-1148. eCollection 2017.

43.

A Non-integrating Lentiviral Approach Overcomes Cas9-Induced Immune Rejection to Establish an Immunocompetent Metastatic Renal Cancer Model.

Hu J, Schokrpur S, Archang M, Hermann K, Sharrow AC, Khanna P, Novak J, Signoretti S, Bhatt RS, Knudsen BS, Xu H, Wu L.

Mol Ther Methods Clin Dev. 2018 Feb 23;9:203-210. doi: 10.1016/j.omtm.2018.02.009. eCollection 2018 Jun 15.

44.

Novel Regulation of Integrin Trafficking by Rab11-FIP5 in Aggressive Prostate Cancer.

Das L, Gard JMC, Prekeris R, Nagle RB, Morrissey C, Knudsen BS, Miranti CK, Cress AE.

Mol Cancer Res. 2018 Aug;16(8):1319-1331. doi: 10.1158/1541-7786.MCR-17-0589. Epub 2018 May 14.

45.

Heat Stress and Hepatic Laser Thermal Ablation Induce Hepatocellular Carcinoma Growth: Role of PI3K/mTOR/AKT Signaling.

Jondal DE, Thompson SM, Butters KA, Knudsen BE, Anderson JL, Carter RE, Roberts LR, Callstrom MR, Woodrum DA.

Radiology. 2018 Sep;288(3):730-738. doi: 10.1148/radiol.2018172944. Epub 2018 May 8.

46.

Working Together: Contributions of Corpus Analyses and Experimental Psycholinguistics to Understanding Conversation.

Meyer AS, Alday PM, Decuyper C, Knudsen B.

Front Psychol. 2018 Apr 12;9:525. doi: 10.3389/fpsyg.2018.00525. eCollection 2018.

47.
48.

Editorial Comment.

Knudsen BE, Wise HA 2nd.

Urology. 2018 May;115:58. doi: 10.1016/j.urology.2017.10.066. Epub 2018 Mar 27. No abstract available.

PMID:
29602565
49.

Detection of the Malaria causing Plasmodium Parasite in Saliva from Infected Patients using Topoisomerase I Activity as a Biomarker.

Hede MS, Fjelstrup S, Lötsch F, Zoleko RM, Klicpera A, Groger M, Mischlinger J, Endame L, Veletzky L, Neher R, Simonsen AKW, Petersen E, Mombo-Ngoma G, Stougaard M, Ho YP, Labouriau R, Ramharter M, Knudsen BR.

Sci Rep. 2018 Mar 7;8(1):4122. doi: 10.1038/s41598-018-22378-7.

50.

Regulation of inside-out β1-integrin activation by CDCP1.

Pollan SG, Huang F, Sperger JM, Lang JM, Morrissey C, Cress AE, Chu CY, Bhowmick NA, You S, Freeman MR, Spassov DS, Moasser MM, Carter WG, Satapathy SR, Shah K, Knudsen BS.

Oncogene. 2018 May;37(21):2817-2836. doi: 10.1038/s41388-018-0142-2. Epub 2018 Mar 7.

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