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Items: 1 to 50 of 79

1.

Diagnosis of Fungal Infections: A Systematic Review and Meta-Analysis Supporting ATS Clinical Practice Guideline.

Haydour Q, Hage CA, Carmona-Porquera EM, Epelbaum O, Evans SE, Gabe LM, Knox KS, Kolls JK, Wengenack NL, Prokop LJ, Limper AH, Murad MH.

Ann Am Thorac Soc. 2019 Jun 20. doi: 10.1513/AnnalsATS.201811-766OC. [Epub ahead of print]

PMID:
31219341
2.

Rat BodyMap transcriptomes reveal unique circular RNA features across tissue types and developmental stages.

Zhou T, Xie X, Li M, Shi J, Zhou JJ, Knox KS, Wang T, Chen Q, Gu W.

RNA. 2018 Nov;24(11):1443-1456. doi: 10.1261/rna.067132.118. Epub 2018 Aug 9.

3.

Ex Vivo Cytokine Release, Determined by a Multiplex Cytokine Assay, in Response to Coccidioidal Antigen Stimulation of Whole Blood among Subjects with Recently Diagnosed Primary Pulmonary Coccidioidomycosis.

Ampel NM, Robey I, Nguyen CT, Roller B, August J, Knox KS, Pappagianis D.

mSphere. 2018 May 16;3(3). pii: e00065-18. doi: 10.1128/mSphere.00065-18. eCollection 2018 May-Jun.

4.

Variance Component Selection With Applications to Microbiome Taxonomic Data.

Zhai J, Kim J, Knox KS, Twigg HL 3rd, Zhou H, Zhou JJ.

Front Microbiol. 2018 Mar 28;9:509. doi: 10.3389/fmicb.2018.00509. eCollection 2018.

5.

Segmented Filamentous Bacteria Provoke Lung Autoimmunity by Inducing Gut-Lung Axis Th17 Cells Expressing Dual TCRs.

Bradley CP, Teng F, Felix KM, Sano T, Naskar D, Block KE, Huang H, Knox KS, Littman DR, Wu HJ.

Cell Host Microbe. 2017 Nov 8;22(5):697-704.e4. doi: 10.1016/j.chom.2017.10.007.

6.

Pseudomonas aeruginosa increases MUC1 expression in macrophages through the TLR4-p38 pathway.

Kato K, Hanss AD, Zemskova MA, Morgan NE, Kim M, Knox KS, Lin Y, Lillehoj EP, Kim KC.

Biochem Biophys Res Commun. 2017 Oct 14;492(2):231-235. doi: 10.1016/j.bbrc.2017.08.056. Epub 2017 Aug 16.

7.

Diagnosis and Management of Coccidioidomycosis.

Gabe LM, Malo J, Knox KS.

Clin Chest Med. 2017 Sep;38(3):417-433. doi: 10.1016/j.ccm.2017.04.005. Epub 2017 Jun 3. Review.

PMID:
28797486
8.

Identification of Jak-STAT signaling involvement in sarcoidosis severity via a novel microRNA-regulated peripheral blood mononuclear cell gene signature.

Zhou T, Casanova N, Pouladi N, Wang T, Lussier Y, Knox KS, Garcia JGN.

Sci Rep. 2017 Jun 26;7(1):4237. doi: 10.1038/s41598-017-04109-6.

9.

Coccidioidomycosis among persons undergoing lung transplantation in the coccidioidal endemic region.

Chaudhary S, Meinke L, Ateeli H, Knox KS, Raz Y, Ampel NM.

Transpl Infect Dis. 2017 Aug;19(4). doi: 10.1111/tid.12713. Epub 2017 Jun 22.

PMID:
28452423
10.

Enhanced Antibody Detection and Diagnosis of Coccidioidomycosis with the MiraVista IgG and IgM Detection Enzyme Immunoassay.

Malo J, Holbrook E, Zangeneh T, Strawter C, Oren E, Robey I, Erickson H, Chahal R, Durkin M, Thompson C, Hoover SE, Ampel NM, Wheat LJ, Knox KS.

J Clin Microbiol. 2017 Mar;55(3):893-901. doi: 10.1128/JCM.01880-16. Epub 2017 Jan 4.

11.

Lung microbiome in human immunodeficiency virus infection.

Twigg HL 3rd, Weinstock GM, Knox KS.

Transl Res. 2017 Jan;179:97-107. doi: 10.1016/j.trsl.2016.07.008. Epub 2016 Jul 18. Review.

12.

Effect of Advanced HIV Infection on the Respiratory Microbiome.

Twigg HL 3rd, Knox KS, Zhou J, Crothers KA, Nelson DE, Toh E, Day RB, Lin H, Gao X, Dong Q, Mi D, Katz BP, Sodergren E, Weinstock GM.

Am J Respir Crit Care Med. 2016 Jul 15;194(2):226-35. doi: 10.1164/rccm.201509-1875OC.

13.

Identifying Novel Biomarkers in Sarcoidosis Using Genome-Based Approaches.

Casanova N, Zhou T, Knox KS, Garcia JGN.

Clin Chest Med. 2015 Dec;36(4):621-630. doi: 10.1016/j.ccm.2015.08.005. Epub 2015 Sep 26. Review.

14.

Cytokine Profiles from Antigen-Stimulated Whole-Blood Samples among Patients with Pulmonary or Nonmeningeal Disseminated Coccidioidomycosis.

Ampel NM, Nesbit LA, Nguyen CT, Chavez S, Knox KS, Johnson SM, Pappagianis D.

Clin Vaccine Immunol. 2015 Aug;22(8):917-22. doi: 10.1128/CVI.00280-15. Epub 2015 Jun 3.

15.

Acute eosinophilic pneumonia associated with ingestion of Ulomoides dermestoides larvae ("Chinese beetles").

Natt BS, Campion JM, Knox KS.

Ann Am Thorac Soc. 2014 Dec;11(10):1667-8. doi: 10.1513/AnnalsATS.201410-483LE. No abstract available.

PMID:
25549036
16.

Positive (1-3) B-d-glucan and cross reactivity of fungal assays in coccidioidomycosis.

Zangeneh TT, Malo J, Luraschi-Monjagatta C, Hage CA, Wheat LJ, Strawter C, Klotz SA, Knox KS.

Med Mycol. 2015 Feb 1;53(2):171-3. doi: 10.1093/mmy/myu077. Epub 2014 Dec 24.

PMID:
25541557
17.

Positron emission tomography in the evaluation of pulmonary nodules among patients living in a coccidioidal endemic region.

Reyes N, Onadeko OO, Luraschi-Monjagatta Mdel C, Knox KS, Rennels MA, Walsh TK, Ampel NM.

Lung. 2014 Aug;192(4):589-93. doi: 10.1007/s00408-014-9589-2. Epub 2014 May 7.

PMID:
24801058
18.

Perspective on coccidioidomycosis and histoplasmosis.

Knox KS.

Am J Respir Crit Care Med. 2014 Mar 15;189(6):752-3. doi: 10.1164/rccm.201311-2024LE. No abstract available.

PMID:
24628318
19.

Update on the diagnosis of pulmonary coccidioidomycosis.

Malo J, Luraschi-Monjagatta C, Wolk DM, Thompson R, Hage CA, Knox KS.

Ann Am Thorac Soc. 2014 Feb;11(2):243-53. doi: 10.1513/AnnalsATS.201308-286FR. Review.

PMID:
24575994
20.

Use of bronchoalveolar lavage to assess the respiratory microbiome: signal in the noise.

Twigg HL 3rd, Morris A, Ghedin E, Curtis JL, Huffnagle GB, Crothers K, Campbell TB, Flores SC, Fontenot AP, Beck JM, Huang L, Lynch S, Knox KS, Weinstock G; Lung HIV Microbiome Project.

Lancet Respir Med. 2013 Jul;1(5):354-6. doi: 10.1016/S2213-2600(13)70117-6. Epub 2013 Jul 8. No abstract available.

PMID:
24429191
21.

Immunological characterization of bronchoalveolar lavage fluid in patients with acute pulmonary coccidioidomycosis.

Nesbit LA, Knox KS, Nguyen CT, Roesch J, Wheat LJ, Johnson SM, Pappagianis D, Chavez S, Ampel NM.

J Infect Dis. 2013 Sep 1;208(5):857-63. doi: 10.1093/infdis/jit246. Epub 2013 Jun 3.

PMID:
23737603
22.

Impact of antiretroviral therapy on lung immunology and inflammation.

Twigg HL 3rd, Knox KS.

Clin Chest Med. 2013 Jun;34(2):155-64. doi: 10.1016/j.ccm.2013.01.004. Epub 2013 Apr 8. Review.

23.

Widespread colonization of the lung by Tropheryma whipplei in HIV infection.

Lozupone C, Cota-Gomez A, Palmer BE, Linderman DJ, Charlson ES, Sodergren E, Mitreva M, Abubucker S, Martin J, Yao G, Campbell TB, Flores SC, Ackerman G, Stombaugh J, Ursell L, Beck JM, Curtis JL, Young VB, Lynch SV, Huang L, Weinstock GM, Knox KS, Twigg H, Morris A, Ghedin E, Bushman FD, Collman RG, Knight R, Fontenot AP; Lung HIV Microbiome Project.

Am J Respir Crit Care Med. 2013 May 15;187(10):1110-7. doi: 10.1164/rccm.201211-2145OC.

24.

Histoplasma capsulatum preferentially induces IDO in the lung.

Hage CA, Horan DJ, Durkin M, Connolly P, Desta Z, Skaar TC, Knox KS, Wheat LJ.

Med Mycol. 2013 Apr;51(3):270-9. doi: 10.3109/13693786.2012.710857. Epub 2012 Nov 27.

PMID:
23181600
25.

Peripheral blood gene expression as a novel genomic biomarker in complicated sarcoidosis.

Zhou T, Zhang W, Sweiss NJ, Chen ES, Moller DR, Knox KS, Ma SF, Wade MS, Noth I, Machado RF, Garcia JG.

PLoS One. 2012;7(9):e44818. doi: 10.1371/journal.pone.0044818. Epub 2012 Sep 12.

26.

Endemic mycoses: overlooked causes of community acquired pneumonia.

Hage CA, Knox KS, Wheat LJ.

Respir Med. 2012 Jun;106(6):769-76. doi: 10.1016/j.rmed.2012.02.004. Epub 2012 Mar 3. Review.

27.

Systematic review: the relationship between interstitial lung diseases and gastro-oesophageal reflux disease.

Hershcovici T, Jha LK, Johnson T, Gerson L, Stave C, Malo J, Knox KS, Quan S, Fass R.

Aliment Pharmacol Ther. 2011 Dec;34(11-12):1295-305. doi: 10.1111/j.1365-2036.2011.04870.x. Epub 2011 Oct 17. Review.

28.

Antigen detection in bronchoalveolar lavage fluid for diagnosis of fungal pneumonia.

Hage CA, Knox KS, Davis TE, Wheat LJ.

Curr Opin Pulm Med. 2011 May;17(3):167-71. doi: 10.1097/MCP.0b013e3283447b60. Review.

PMID:
21311331
29.

An official American Thoracic Society statement: Treatment of fungal infections in adult pulmonary and critical care patients.

Limper AH, Knox KS, Sarosi GA, Ampel NM, Bennett JE, Catanzaro A, Davies SF, Dismukes WE, Hage CA, Marr KA, Mody CH, Perfect JR, Stevens DA; American Thoracic Society Fungal Working Group.

Am J Respir Crit Care Med. 2011 Jan 1;183(1):96-128. doi: 10.1164/rccm.2008-740ST.

PMID:
21193785
30.

Reconstitution of CD4 T cells in bronchoalveolar lavage fluid after initiation of highly active antiretroviral therapy.

Knox KS, Vinton C, Hage CA, Kohli LM, Twigg HL 3rd, Klatt NR, Zwickl B, Waltz J, Goldman M, Douek DC, Brenchley JM.

J Virol. 2010 Sep;84(18):9010-8. doi: 10.1128/JVI.01138-10. Epub 2010 Jul 7.

31.

The early riser. Reassurance.

Onadeko O, Knox KS.

J Clin Sleep Med. 2010 Jun 15;6(3):297-8. No abstract available.

32.

Blastomycosis in indiana: digging up more cases.

Carlos WG, Rose AS, Wheat LJ, Norris S, Sarosi GA, Knox KS, Hage CA.

Chest. 2010 Dec;138(6):1377-82. doi: 10.1378/chest.10-0627. Epub 2010 Jun 17.

PMID:
20558552
33.

Histoplasmosis.

Knox KS, Hage CA.

Proc Am Thorac Soc. 2010 May;7(3):169-72. doi: 10.1513/pats.200907-069AL. Review.

PMID:
20463244
34.

Diagnosis of histoplasmosis by antigen detection in BAL fluid.

Hage CA, Davis TE, Fuller D, Egan L, Witt JR 3rd, Wheat LJ, Knox KS.

Chest. 2010 Mar;137(3):623-8. doi: 10.1378/chest.09-1702. Epub 2009 Oct 16.

PMID:
19837826
35.

Surgical management of pulmonary and mediastinal sequelae of histoplasmosis: a challenging spectrum.

Hammoud ZT, Rose AS, Hage CA, Knox KS, Rieger K, Kesler KA.

Ann Thorac Surg. 2009 Aug;88(2):399-403. doi: 10.1016/j.athoracsur.2009.04.041.

PMID:
19632382
36.

Role of bronchoalveolar lavage diagnostics in fungal infections.

Knox KS, Meinke L.

Clin Chest Med. 2009 Jun;30(2):355-65, viii. doi: 10.1016/j.ccm.2009.02.010. Review.

PMID:
19375640
37.

In this issue of Clinics in Chest Medicine, updates on individual pathogens as well as the field of fungal diagnostics and therapeutics. Preface.

Knox KS, Sarosi GA.

Clin Chest Med. 2009 Jun;30(2):xi-xii. doi: 10.1016/j.ccm.2009.03.003. No abstract available.

PMID:
19375627
38.

Gene expression profiling identifies MMP-12 and ADAMDEC1 as potential pathogenic mediators of pulmonary sarcoidosis.

Crouser ED, Culver DA, Knox KS, Julian MW, Shao G, Abraham S, Liyanarachchi S, Macre JE, Wewers MD, Gavrilin MA, Ross P, Abbas A, Eng C.

Am J Respir Crit Care Med. 2009 May 15;179(10):929-38. doi: 10.1164/rccm.200803-490OC. Epub 2009 Feb 12.

39.

High frequencies of polyfunctional HIV-specific T cells are associated with preservation of mucosal CD4 T cells in bronchoalveolar lavage.

Brenchley JM, Knox KS, Asher AI, Price DA, Kohli LM, Gostick E, Hill BJ, Hage CA, Brahmi Z, Khoruts A, Twigg HL 3rd, Schacker TW, Douek DC.

Mucosal Immunol. 2008 Jan;1(1):49-58. doi: 10.1038/mi.2007.5.

40.

Performance characteristics of the platelia Aspergillus enzyme immunoassay for detection of Aspergillus galactomannan antigen in bronchoalveolar lavage fluid.

Husain S, Clancy CJ, Nguyen MH, Swartzentruber S, Leather H, LeMonte AM, Durkin MM, Knox KS, Hage CA, Bentsen C, Singh N, Wingard JR, Wheat LJ.

Clin Vaccine Immunol. 2008 Dec;15(12):1760-3. doi: 10.1128/CVI.00226-08. Epub 2008 Oct 8.

41.

HIV-Related Lung Disorders.

Twigg HL 3rd, Knox KS.

Drug Discov Today Dis Mech. 2007;4(2):95-101.

42.

Differential Th17 CD4 T-cell depletion in pathogenic and nonpathogenic lentiviral infections.

Brenchley JM, Paiardini M, Knox KS, Asher AI, Cervasi B, Asher TE, Scheinberg P, Price DA, Hage CA, Kholi LM, Khoruts A, Frank I, Else J, Schacker T, Silvestri G, Douek DC.

Blood. 2008 Oct 1;112(7):2826-35. doi: 10.1182/blood-2008-05-159301. Epub 2008 Jul 29.

43.

A 24-year-old man with mediastinal mass, dyspnea, and a pleural effusion.

Rose AS, Knox KS, Hage CA.

Chest. 2008 Jul;134(1):200-3. doi: 10.1378/chest.07-2487. No abstract available.

PMID:
18628226
44.

Hepatic, ocular, and cutaneous sarcoidosis.

Rose AS, Tielker MA, Knox KS.

Clin Chest Med. 2008 Sep;29(3):509-24, ix. doi: 10.1016/j.ccm.2008.03.008. Review.

PMID:
18539241
45.

HIV associated pulmonary emphysema: a review of the literature and inquiry into its mechanism.

Petrache I, Diab K, Knox KS, Twigg HL 3rd, Stephens RS, Flores S, Tuder RM.

Thorax. 2008 May;63(5):463-9. doi: 10.1136/thx.2007.079111. Review.

PMID:
18443163
46.

Pulmonary histoplasmosis.

Hage CA, Wheat LJ, Loyd J, Allen SD, Blue D, Knox KS.

Semin Respir Crit Care Med. 2008 Apr;29(2):151-65. doi: 10.1055/s-2008-1063854. Review.

PMID:
18365997
47.

Detection of Histoplasma capsulatum antigenuria by ultrafiltration of samples with false-negative results.

Egan L, Connolly PA, Fuller D, Davis TE, Witt J 3rd, Knox KS, Hage CA, Wheat LJ.

Clin Vaccine Immunol. 2008 Apr;15(4):726-8. doi: 10.1128/CVI.00493-07. Epub 2008 Feb 27.

48.

Histoplasmosis as a cause for a positive Fungitell (1 --> 3)-beta-D-glucan test.

Egan L, Connolly P, Wheat LJ, Fuller D, Dais TE, Knox KS, Hage CA.

Med Mycol. 2008 Feb;46(1):93-5. doi: 10.1080/13693780701642235.

PMID:
18297546
49.

An 81-year-old man with lactic acidosis, refractory hypoglycemia, and lymphocytosis.

Diab K, Knox KS, Hage CA.

Chest. 2008 Jan;133(1):306-10. doi: 10.1378/chest.07-1130. No abstract available.

PMID:
18187760
50.

Bronchoalveolar lavage as a research tool.

Rose AS, Knox KS.

Semin Respir Crit Care Med. 2007 Oct;28(5):561-73. Review.

PMID:
17975783

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