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Items: 1 to 50 of 299

1.

Kinase Inhibitor Treatment of Patients with Advanced Cancer Results in High Tumor Drug Concentrations and in Specific Alterations of the Tumor Phosphoproteome.

Labots M, Pham TV, Honeywell RJ, Knol JC, Beekhof R, de Goeij-de Haas R, Dekker H, Neerincx M, Piersma SR, van der Mijn JC, van der Peet DL, Meijerink MR, Peters GJ, van Grieken NCT, Jiménez CR, Verheul HMW.

Cancers (Basel). 2020 Feb 1;12(2). pii: E330. doi: 10.3390/cancers12020330.

2.

Perivascular Adipose Tissue Controls Insulin-Stimulated Perfusion, Mitochondrial Protein Expression and Glucose Uptake in Muscle Through Adipomuscular Arterioles.

Turaihi AH, Serné EH, Molthoff CF, Koning JJ, Knol J, Niessen HW, Jose Th Goumans M, van Poelgeest EM, Yudkin JS, Smulders YM, Jimenez CR, van Hinsbergh VW, Eringa EC.

Diabetes. 2020 Jan 31. pii: db181066. doi: 10.2337/db18-1066. [Epub ahead of print]

PMID:
32005705
3.

Local Recurrence After Transanal Total Mesorectal Excision for Rectal Cancer: A Multicenter Cohort Study.

Roodbeen SX, Spinelli A, Bemelman WA, Di Candido F, Cardepont M, Denost Q, D'Hoore A, Houben B, Knol JJ, Martín-Pérez B, Rullier E, Sands D, Setton I, Van de Steen K, Tanis PJ, Wexner SD, Hompes R, Wolthuis AM.

Ann Surg. 2020 Jan 14. doi: 10.1097/SLA.0000000000003757. [Epub ahead of print]

PMID:
31972648
4.

Correction: Supplementation of diet with non-digestible oligosaccharides alters the intestinal microbiota, but not arthritis development, in IL-1 receptor antagonist deficient mice.

Rogier R, Ederveen THA, Wopereis H, Hartog A, Boekhorst J, van Hijum SAFT, Knol J, Garssen J, Walgreen B, Helsen MM, van der Kraan PM, van Lent PLEM, van de Loo FAJ, Abdollahi-Roodsaz S, Koenders MI.

PLoS One. 2019 Dec 31;14(12):e0227517. doi: 10.1371/journal.pone.0227517. eCollection 2019.

5.

Microbial transmission from mother to child: improving infant intestinal microbiota development by identifying the obstacles.

Van Daele E, Knol J, Belzer C.

Crit Rev Microbiol. 2019 Sep - Nov;45(5-6):613-648. doi: 10.1080/1040841X.2019.1680601. Epub 2019 Dec 20.

PMID:
31859540
6.

Surgical Quality Assurance in COLOR III: Standardization and Competency Assessment in a Randomized Controlled Trial.

Tsai AY, Mavroveli S, Miskovic D, van Oostendorp S, Adamina M, Hompes R, Aigner F, Spinelli A, Warusavitarne J, Knol J, Albert M, Nassif G Jr, Bemelman W, Boni L, Ovesen H, Austin R, Muratore A, Seitinger G, Sietses C, Lacy AM, Tuynman JB, Bonjer HJ, Hanna GB.

Ann Surg. 2019 Nov;270(5):768-774. doi: 10.1097/SLA.0000000000003537.

PMID:
31573984
7.

Low-calcium diet in mice leads to reduced gut colonization by Enterococcus faecium.

Top J, Hendrickx APA, van Ampting MTJ, van Limpt K, Knol J, van de Kamer D, Braat JC, Viveen M, Rogers MR, Kemperman H, Willems RJL, Paganelli FL.

Microbiologyopen. 2019 Dec;8(12):e936. doi: 10.1002/mbo3.936. Epub 2019 Sep 30.

8.

Urethral Injury and Other Urologic Injuries During Transanal Total Mesorectal Excision: An International Collaborative Study.

Sylla P, Knol JJ, D'Andrea AP, Perez RO, Atallah SB, Penna M, Hompes R, Wolthuis A, Rouanet P, Fingerhut A; International taTME Urethral Injury Collaborative.

Ann Surg. 2019 Sep 17. doi: 10.1097/SLA.0000000000003597. [Epub ahead of print]

PMID:
31567502
9.

Postbiotics and Their Potential Applications in Early Life Nutrition and Beyond.

Wegh CAM, Geerlings SY, Knol J, Roeselers G, Belzer C.

Int J Mol Sci. 2019 Sep 20;20(19). pii: E4673. doi: 10.3390/ijms20194673. Review.

10.

Proteomic Analysis of miR-195 and miR-497 Replacement Reveals Potential Candidates that Increase Sensitivity to Oxaliplatin in MSI/P53wt Colorectal Cancer Cells.

Poel D, Boyd LNC, Beekhof R, Schelfhorst T, Pham TV, Piersma SR, Knol JC, Jimenez CR, Verheul HMW, Buffart TE.

Cells. 2019 Sep 19;8(9). pii: E1111. doi: 10.3390/cells8091111.

11.

Oligosaccharides Modulate Rotavirus-Associated Dysbiosis and TLR Gene Expression in Neonatal Rats.

Azagra-Boronat I, Massot-Cladera M, Knipping K, Van't Land B, Tims S, Stahl B, Knol J, Garssen J, Franch À, Castell M, Pérez-Cano FJ, Rodríguez-Lagunas MJ.

Cells. 2019 Aug 11;8(8). pii: E876. doi: 10.3390/cells8080876.

12.

Supplementation of diet with non-digestible oligosaccharides alters the intestinal microbiota, but not arthritis development, in IL-1 receptor antagonist deficient mice.

Rogier R, Ederveen THA, Wopereis H, Hartog A, Boekhorst J, van Hijum SAFT, Knol J, Garssen J, Walgreen B, Helsen MM, van der Kraan PM, van Lent PLEM, van de Loo FAJ, Abdollahi-Roodsaz S, Koenders MI.

PLoS One. 2019 Jul 8;14(7):e0219366. doi: 10.1371/journal.pone.0219366. eCollection 2019. Erratum in: PLoS One. 2019 Dec 31;14(12):e0227517.

13.

Short-term changes of intestinal microbiota composition in preterm infants after two prophylactic doses of vancomycin.

d'Haens EJ, Zwittink RD, Belzer C, Hemels MAC, van Lingen RA, Renes IB, Knol J, van Zoeren-Grobben D.

Acta Paediatr. 2019 Oct;108(10):1919-1920. doi: 10.1111/apa.14915. Epub 2019 Jul 22. No abstract available.

PMID:
31240766
14.

The potential for pre-, pro- and synbiotics in the management of infants at risk of cow's milk allergy or with cow's milk allergy: An exploration of the rationale, available evidence and remaining questions.

Fox A, Bird JA, Fiocchi A, Knol J, Meyer R, Salminen S, Sitang G, Szajewska H, Papadopoulos N.

World Allergy Organ J. 2019 Jun 4;12(5):100034. doi: 10.1016/j.waojou.2019.100034. eCollection 2019. Review.

15.

A specific synbiotic-containing amino acid-based formula restores gut microbiota in non-IgE mediated cow's milk allergic infants: a randomized controlled trial.

Wopereis H, van Ampting MTJ, Cetinyurek-Yavuz A, Slump R, Candy DCA, Butt AM, Peroni DG, Vandenplas Y, Fox AT, Shah N, Roeselers G, Harthoorn LF, Michaelis LJ, Knol J, West CE; ASSIGN study group.

Clin Transl Allergy. 2019 May 31;9:27. doi: 10.1186/s13601-019-0267-6. eCollection 2019.

16.

INKA, an integrative data analysis pipeline for phosphoproteomic inference of active kinases.

Beekhof R, van Alphen C, Henneman AA, Knol JC, Pham TV, Rolfs F, Labots M, Henneberry E, Le Large TY, de Haas RR, Piersma SR, Vurchio V, Bertotti A, Trusolino L, Verheul HM, Jimenez CR.

Mol Syst Biol. 2019 May 24;15(5):e8981. doi: 10.15252/msb.20198981. No abstract available.

17.

The Preterm Gut Microbiota: An Inconspicuous Challenge in Nutritional Neonatal Care.

Henderickx JGE, Zwittink RD, van Lingen RA, Knol J, Belzer C.

Front Cell Infect Microbiol. 2019 Apr 2;9:85. doi: 10.3389/fcimb.2019.00085. eCollection 2019. Review.

18.

INKA, an integrative data analysis pipeline for phosphoproteomic inference of active kinases.

Beekhof R, van Alphen C, Henneman AA, Knol JC, Pham TV, Rolfs F, Labots M, Henneberry E, Le Large TY, de Haas RR, Piersma SR, Vurchio V, Bertotti A, Trusolino L, Verheul HM, Jimenez CR.

Mol Syst Biol. 2019 Apr 12;15(4):e8250. doi: 10.15252/msb.20188250. Erratum in: Mol Syst Biol. 2019 May 24;15(5):e8981.

19.

Metaproteomic and 16S rRNA Gene Sequencing Analysis of the Infant Fecal Microbiome.

Cortes L, Wopereis H, Tartiere A, Piquenot J, Gouw JW, Tims S, Knol J, Chelsky D.

Int J Mol Sci. 2019 Mar 21;20(6). pii: E1430. doi: 10.3390/ijms20061430.

20.

Structured training pathway and proctoring; multicenter results of the implementation of transanal total mesorectal excision (TaTME) in the Netherlands.

Veltcamp Helbach M, van Oostendorp SE, Koedam TWA, Knol JJ, Stockmann HBAC, Oosterling SJ, Vuylsteke RCLM, de Graaf EJR, Doornebosch PG, Hompes R, Bonjer HJ, Sietses C, Tuynman JB.

Surg Endosc. 2020 Jan;34(1):192-201. doi: 10.1007/s00464-019-06750-w. Epub 2019 Mar 19.

21.

Gut microbiota from infant with cow's milk allergy promotes clinical and immune features of atopy in a murine model.

Mauras A, Wopereis H, Yeop I, Esber N, Delannoy J, Labellie C, Reygner J, Kapel N, Slump R, van Eijndthoven T, Rutten L, Knol J, Garssen J, Harthoorn LF, Butel MJ, Bajaj-Elliott M, Hartog A, Waligora-Dupriet AJ.

Allergy. 2019 Sep;74(9):1790-1793. doi: 10.1111/all.13787. Epub 2019 Apr 30. No abstract available.

22.

Supplementation of dietary non-digestible oligosaccharides from birth onwards improve social and reduce anxiety-like behaviour in male BALB/c mice.

Szklany K, Wopereis H, de Waard C, van Wageningen T, An R, van Limpt K, Knol J, Garssen J, Knippels LMJ, Belzer C, Kraneveld AD.

Nutr Neurosci. 2019 Mar 14:1-15. doi: 10.1080/1028415X.2019.1576362. [Epub ahead of print]

PMID:
30871432
23.

Prebiotic oligosaccharides in early life alter gut microbiome development in male mice while supporting influenza vaccination responses.

van den Elsen LWJ, Tims S, Jones AM, Stewart A, Stahl B, Garssen J, Knol J, Forbes-Blom EE, Van't Land B.

Benef Microbes. 2019 Apr 19;10(3):279-291. doi: 10.3920/BM2018.0098. Epub 2019 Feb 18.

PMID:
30773928
24.

Human Testis Phosphoproteome Reveals Kinases as Potential Targets in Spermatogenesis and Testicular Cancer.

Castillo J, Knol JC, Korver CM, Piersma SR, Pham TV, de Goeij-de Haas RR, van Pelt AMM, Jimenez CR, Jansen BJH.

Mol Cell Proteomics. 2019 Mar 15;18(Suppl 1):S132-S144. doi: 10.1074/mcp.RA118.001278. Epub 2019 Jan 25.

PMID:
30683686
25.

Prevention of Rotavirus Diarrhea in Suckling Rats by a Specific Fermented Milk Concentrate with Prebiotic Mixture.

Rigo-Adrover MDM, Knipping K, Garssen J, van Limpt K, Knol J, Franch À, Castell M, Rodríguez-Lagunas MJ, Pérez-Cano FJ.

Nutrients. 2019 Jan 18;11(1). pii: E189. doi: 10.3390/nu11010189.

26.

A specific synbiotic-containing amino acid-based formula in dietary management of cow's milk allergy: a randomized controlled trial.

Fox AT, Wopereis H, Van Ampting MTJ, Oude Nijhuis MM, Butt AM, Peroni DG, Vandenplas Y, Candy DCA, Shah N, West CE, Garssen J, Harthoorn LF, Knol J, Michaelis LJ; ASSIGN study group.

Clin Transl Allergy. 2019 Jan 15;9:5. doi: 10.1186/s13601-019-0241-3. eCollection 2019.

27.

Mice co-administrated with partially hydrolysed whey proteins and prebiotic fibre mixtures show allergen-specific tolerance and a modulated gut microbiota.

Kleinjans L, Veening-Griffioen DH, Wehkamp T, van Bergenhenegouwen J, Knol J, Garssen J, Knippels LMJ, Belzer C, Jeurink PV.

Benef Microbes. 2019 Mar 13;10(2):165-178. doi: 10.3920/BM2018.0001. Epub 2018 Dec 10.

PMID:
30525954
28.

Intravenous Lidocaine Administered as Twice Daily Bolus and Continuous Infusion for Intractable Cancer Pain and Wound Care Pain.

Kintzel PE, Knol JD, Roe G.

J Palliat Med. 2019 Mar;22(3):343-347. doi: 10.1089/jpm.2018.0243. Epub 2018 Dec 1.

PMID:
30508406
29.

Laparoscopic right posterior sectionectomy: single-center experience and technical aspects.

D'Hondt M, Ovaere S, Knol J, Vandeputte M, Parmentier I, De Meyere C, Vansteenkiste F, Besselink M, Pottel H, Verslype C.

Langenbecks Arch Surg. 2019 Feb;404(1):21-29. doi: 10.1007/s00423-018-1731-9. Epub 2018 Nov 21.

PMID:
30465088
30.

Targeting the gut microbiota to influence brain development and function in early life.

Wang S, Harvey L, Martin R, van der Beek EM, Knol J, Cryan JF, Renes IB.

Neurosci Biobehav Rev. 2018 Dec;95:191-201. doi: 10.1016/j.neubiorev.2018.09.002. Epub 2018 Sep 6. Review.

PMID:
30195933
31.

Sex differences in lipid metabolism are affected by presence of the gut microbiota.

Baars A, Oosting A, Lohuis M, Koehorst M, El Aidy S, Hugenholtz F, Smidt H, Mischke M, Boekschoten MV, Verkade HJ, Garssen J, van der Beek EM, Knol J, de Vos P, van Bergenhenegouwen J, Fransen F.

Sci Rep. 2018 Sep 7;8(1):13426. doi: 10.1038/s41598-018-31695-w.

32.

New Paradigm of Live Surgical Education: Synchronized Deferred Live Surgery.

Knol J, Bonjer J, Houben B, Wexner SD, Hompes R, Atallah S, Heald RJ, Sietses C, Chadi SA.

J Am Coll Surg. 2018 Oct;227(4):467-473. doi: 10.1016/j.jamcollsurg.2018.07.660. Epub 2018 Aug 14. No abstract available.

PMID:
30118895
33.

Changes in the urinary extracellular vesicle proteome are associated with nephronophthisis-related ciliopathies.

Stokman MF, Bijnsdorp IV, Schelfhorst T, Pham TV, Piersma SR, Knol JC, Giles RH, Bongers EMHF, Knoers NVAM, Lilien MR, Jiménez CR, Renkema KY.

J Proteomics. 2019 Feb 10;192:27-36. doi: 10.1016/j.jprot.2018.07.008. Epub 2018 Jul 30.

34.

Comparative genomics and genotype-phenotype associations in Bifidobacterium breve.

Bottacini F, Morrissey R, Esteban-Torres M, James K, van Breen J, Dikareva E, Egan M, Lambert J, van Limpt K, Knol J, O'Connell Motherway M, van Sinderen D.

Sci Rep. 2018 Jul 13;8(1):10633. doi: 10.1038/s41598-018-28919-4.

35.

Quality of life after rectal cancer surgery: differences between laparoscopic and transanal total mesorectal excision.

Veltcamp Helbach M, Koedam TWA, Knol JJ, Velthuis S, Bonjer HJ, Tuynman JB, Sietses C.

Surg Endosc. 2019 Jan;33(1):79-87. doi: 10.1007/s00464-018-6276-z. Epub 2018 Jul 2.

36.

Residual mesorectum on postoperative magnetic resonance imaging following transanal total mesorectal excision (TaTME) and laparoscopic total mesorectal excision (LapTME) in rectal cancer.

Veltcamp Helbach M, Koedam TWA, Knol JJ, Diederik A, Spaargaren GJ, Bonjer HJ, Tuynman JB, Sietses C.

Surg Endosc. 2019 Jan;33(1):94-102. doi: 10.1007/s00464-018-6279-9. Epub 2018 Jul 2.

37.

Is a transanal total mesorectal excision programme feasible in a single-team setting?

Caycedo-Marulanda A, Chadi S, Patel S, Knol J, Wexner SD.

Colorectal Dis. 2018 Jul;20(7):571-573. doi: 10.1111/codi.14243. No abstract available.

PMID:
29963774
38.

[Factors influencing professional decision making on acute hospital referral in the case of elderly patients with cognitive impairment among general practitioners (GPs) in The Netherlands: a qualitative study].

Hazelhoff M, Pouw MA, Welker GA, Knol JJ, de Rooij SEJA.

Tijdschr Gerontol Geriatr. 2018 Sep;49(4):131-138. doi: 10.1007/s12439-018-0253-9. Epub 2018 Jun 26. Dutch.

PMID:
29946754
39.

Preventive Effect of a Synbiotic Combination of Galacto- and Fructooligosaccharides Mixture With Bifidobacterium breve M-16V in a Model of Multiple Rotavirus Infections.

Rigo-Adrover MDM, van Limpt K, Knipping K, Garssen J, Knol J, Costabile A, Franch À, Castell M, Pérez-Cano FJ.

Front Immunol. 2018 Jun 11;9:1318. doi: 10.3389/fimmu.2018.01318. eCollection 2018.

40.

Cancer cells copy migratory behavior and exchange signaling networks via extracellular vesicles.

Steenbeek SC, Pham TV, de Ligt J, Zomer A, Knol JC, Piersma SR, Schelfhorst T, Huisjes R, Schiffelers RM, Cuppen E, Jimenez CR, van Rheenen J.

EMBO J. 2018 Aug 1;37(15). pii: e98357. doi: 10.15252/embj.201798357. Epub 2018 Jun 14.

41.

Cognitive skills training in digital era: A paradigm shift in surgical education using the TaTME model.

Knol J, Keller DS.

Surgeon. 2019 Feb;17(1):28-32. doi: 10.1016/j.surge.2018.03.008. Epub 2018 Apr 30. Review.

PMID:
29724664
42.

Polycyclic Sulfoximines as New Scaffolds for Drug Discovery.

Borst MLG, Ouairy CMJ, Fokkema SC, Cecchi A, Kerckhoffs JMCA, de Boer VL, van den Boogaard PJ, Bus RF, Ebens R, van der Hulst R, Knol J, Libbers R, Lion ZM, Settels BW, de Wever E, Attia KA, Sinnema PJ, de Gooijer JM, Harkema K, Hazewinkel M, Snijder S, Pouwer K.

ACS Comb Sci. 2018 Jun 11;20(6):335-343. doi: 10.1021/acscombsci.7b00150. Epub 2018 May 9.

PMID:
29714998
43.

A synbiotic mixture of scGOS/lcFOS and Bifidobacterium breve M-16V increases faecal Bifidobacterium in healthy young children.

Kosuwon P, Lao-Araya M, Uthaisangsook S, Lay C, Bindels J, Knol J, Chatchatee P.

Benef Microbes. 2018 Jun 15;9(4):541-552. doi: 10.3920/BM2017.0110. Epub 2018 Apr 10.

PMID:
29633642
44.

Specific synbiotics in early life protect against diet-induced obesity in adult mice.

Mischke M, Arora T, Tims S, Engels E, Sommer N, van Limpt K, Baars A, Oozeer R, Oosting A, Bäckhed F, Knol J.

Diabetes Obes Metab. 2018 Jun;20(6):1408-1418. doi: 10.1111/dom.13240. Epub 2018 Mar 5.

45.

Deciphering the trophic interaction between Akkermansia muciniphila and the butyrogenic gut commensal Anaerostipes caccae using a metatranscriptomic approach.

Chia LW, Hornung BVH, Aalvink S, Schaap PJ, de Vos WM, Knol J, Belzer C.

Antonie Van Leeuwenhoek. 2018 Jun;111(6):859-873. doi: 10.1007/s10482-018-1040-x. Epub 2018 Feb 19.

46.

Exploration of the platelet proteome in patients with early-stage cancer.

Sabrkhany S, Kuijpers MJE, Knol JC, Olde Damink SWM, Dingemans AC, Verheul HM, Piersma SR, Pham TV, Griffioen AW, Oude Egbrink MGA, Jimenez CR.

J Proteomics. 2018 Apr 15;177:65-74. doi: 10.1016/j.jprot.2018.02.011. Epub 2018 Feb 10.

47.

Association between duration of intravenous antibiotic administration and early-life microbiota development in late-preterm infants.

Zwittink RD, Renes IB, van Lingen RA, van Zoeren-Grobben D, Konstanti P, Norbruis OF, Martin R, Groot Jebbink LJM, Knol J, Belzer C.

Eur J Clin Microbiol Infect Dis. 2018 Mar;37(3):475-483. doi: 10.1007/s10096-018-3193-y. Epub 2018 Jan 24.

48.

Correction: Quantifying exosome secretion from single cells reveals a modulatory role for GPCR signaling.

Verweij FJ, Bebelman MP, Jimenez CR, Garcia-Vallejo JJ, Janssen H, Neefjes J, Knol JC, de Goeij-de Haas R, Piersma SR, Baglio SR, Verhage M, Middeldorp JM, Zomer A, van Rheenen J, Coppolino MG, Hurbain I, Raposo G, Smit MJ, Toonen RFG, van Niel G, Pegtel DM.

J Cell Biol. 2018 Mar 5;217(3):1157. doi: 10.1083/JCB.20170320601192018c. Epub 2018 Jan 23. No abstract available.

49.

Quantifying exosome secretion from single cells reveals a modulatory role for GPCR signaling.

Verweij FJ, Bebelman MP, Jimenez CR, Garcia-Vallejo JJ, Janssen H, Neefjes J, Knol JC, de Goeij-de Haas R, Piersma SR, Baglio SR, Verhage M, Middeldorp JM, Zomer A, van Rheenen J, Coppolino MG, Hurbain I, Raposo G, Smit MJ, Toonen RFG, van Niel G, Pegtel DM.

J Cell Biol. 2018 Mar 5;217(3):1129-1142. doi: 10.1083/jcb.201703206. Epub 2018 Jan 16. Erratum in: J Cell Biol. 2018 Jan 23;:.

50.

Comparative genome and methylome analysis reveals restriction/modification system diversity in the gut commensal Bifidobacterium breve.

Bottacini F, Morrissey R, Roberts RJ, James K, van Breen J, Egan M, Lambert J, van Limpt K, Knol J, Motherway MO, van Sinderen D.

Nucleic Acids Res. 2018 Feb 28;46(4):1860-1877. doi: 10.1093/nar/gkx1289.

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