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Items: 1 to 50 of 619

1.

Colitose-containing O-polysaccharide structure and O-antigen gene cluster of Escherichia albertii HK18069 related to those of Escherichia coli O55 and E. coli O128.

Zheng H, Naumenko OI, Wang H, Xiong Y, Wang J, Shashkov AS, Li Q, Knirel YA.

Carbohydr Res. 2019 Jul 1;480:73-79. doi: 10.1016/j.carres.2019.05.013. Epub 2019 Jun 2.

PMID:
31176878
2.

The K90 capsular polysaccharide produced by Acinetobacter baumannii LUH5553 contains di-N-acetylpseudaminic acid and is structurally related to the K7 polysaccharide from A. baumannii LUH5533.

Senchenkova SN, Kenyon JJ, Jia T, Popova AV, Shneider MM, Kasimova AA, Shashkov AS, Liu B, Hall RM, Knirel YA.

Carbohydr Res. 2019 Jun 1;479:1-5. doi: 10.1016/j.carres.2019.04.008. Epub 2019 Apr 25.

PMID:
31075648
3.

Structure of the O-specific polysaccharide of Azospirillum doebereinerae type strain GSF71T.

Sigida EN, Fedonenko YP, Shashkov AS, Zdorovenko EL, Konnova SA, Knirel YA.

Carbohydr Res. 2019 May 15;478:54-57. doi: 10.1016/j.carres.2019.04.009. Epub 2019 Apr 29.

PMID:
31054383
4.

Expanding CSDB_GT glycosyltransferase database with Escherichia coli.

Egorova KS, Knirel YA, Toukach PV.

Glycobiology. 2019 Apr 1;29(4):285-287. doi: 10.1093/glycob/cwz006.

PMID:
30759212
5.

Host Specificity of the Dickeya Bacteriophage PP35 Is Directed by a Tail Spike Interaction With Bacterial O-Antigen, Enabling the Infection of Alternative Non-pathogenic Bacterial Host.

Kabanova AP, Shneider MM, Korzhenkov AA, Bugaeva EN, Miroshnikov KK, Zdorovenko EL, Kulikov EE, Toschakov SV, Ignatov AN, Knirel YA, Miroshnikov KA.

Front Microbiol. 2019 Jan 11;9:3288. doi: 10.3389/fmicb.2018.03288. eCollection 2018.

6.

Highly homogenous tri-acylated S-LPS acts as a novel clinically applicable vaccine against Shigella flexneri 2a infection.

Ledov VA, Golovina ME, Markina AA, Knirel YA, L'vov VL, Kovalchuk AL, Aparin PG.

Vaccine. 2019 Feb 14;37(8):1062-1072. doi: 10.1016/j.vaccine.2018.12.067. Epub 2019 Jan 19.

7.

Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster.

Kenyon JJ, Arbatsky NP, Sweeney EL, Shashkov AS, Shneider MM, Popova AV, Hall RM, Knirel YA.

Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.

PMID:
30664967
8.

Structures of cell-wall glycopolymers of Lactobacillus rhamnosus BIM B-1039.

Zdorovenko EL, Kadykova AA, Shashkov AS, Plotnikova DT, Kiseleva EP, Novik GI, Knirel YA.

Carbohydr Res. 2019 Jan 15;472:138-143. doi: 10.1016/j.carres.2018.12.006. Epub 2018 Dec 10.

PMID:
30597450
9.

Structural studies of O-specific polysaccharide(s) and biological activity toward plants of the lipopolysaccharide from Azospirillum brasilense SR8.

Sigida EN, Fedonenko YP, Shashkov AS, Toukach PV, Shelud'ko AV, Zdorovenko EL, Knirel YA, Konnova SA.

Int J Biol Macromol. 2019 Apr 1;126:246-253. doi: 10.1016/j.ijbiomac.2018.12.229. Epub 2018 Dec 24.

PMID:
30590146
10.

Human antibodies eluted from ligand-free Sepharose capable of binding bacterial polysaccharides and sulfated glycans.

Dobrochaeva KL, Khasbiullina NR, Shilova NV, Obukhova PS, Knirel YA, Nokel AY, Bovin NV.

Mol Immunol. 2019 Feb;106:63-68. doi: 10.1016/j.molimm.2018.12.011. Epub 2018 Dec 22.

PMID:
30583222
11.

CHARMM-GUI Membrane Builder for Complex Biological Membrane Simulations with Glycolipids and Lipoglycans.

Lee J, Patel DS, Ståhle J, Park SJ, Kern NR, Kim S, Lee J, Cheng X, Valvano MA, Holst O, Knirel YA, Qi Y, Jo S, Klauda JB, Widmalm G, Im W.

J Chem Theory Comput. 2019 Jan 8;15(1):775-786. doi: 10.1021/acs.jctc.8b01066. Epub 2018 Dec 28.

PMID:
30525595
12.

Erratum to: "Structural Relationships Between Genetically Closely Related O-Antigens of Escherichia coli and Shigella spp." [Biochemistry (Moscow), 81, 600 (2016)].

Knirel YA, Qian C, Shashkov AS, Sizova OV, Zdorovenko EL, Naumenko OI, Senchenkova SN, Perepelov AV, Liu B.

Biochemistry (Mosc). 2018 Nov;83(11):1422-1423. doi: 10.1134/S0006297918110123.

PMID:
30482153
13.

Structure and gene cluster of the O antigen of Escherichia coli F17, a candidate for a new O-serogroup.

Knirel YA, Ivanov PA, Senchenkova SN, Naumenko OI, Ovchinnikova OO, Shashkov AS, Golomidova AK, Babenko VV, Kulikov EE, Letarov AV.

Int J Biol Macromol. 2019 Mar 1;124:389-395. doi: 10.1016/j.ijbiomac.2018.11.149. Epub 2018 Nov 15.

PMID:
30448500
14.

Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78.

Sizova OV, Shashkov AS, Dmitrenok AS, Toukach PV, Knirel YA, Shaikhutdinova RZ, Ivanov SA, Kislichkina AA, Bogun AG, Dentovskaya SV.

Int J Biol Macromol. 2019 Feb 1;122:555-561. doi: 10.1016/j.ijbiomac.2018.10.189. Epub 2018 Oct 29.

PMID:
30385338
15.

Structure of the K82 Capsular Polysaccharide from Acinetobacter baumannii LUH5534 Containing a d-Galactose 4,6-Pyruvic Acid Acetal.

Kasimova AA, Kenyon JJ, Arbatsky NP, Shashkov AS, Popova AV, Knirel YA, Hall RM.

Biochemistry (Mosc). 2018 Jul;83(7):831-835. doi: 10.1134/S0006297918070064.

16.

Acinetobacter baumannii K20 and K21 capsular polysaccharide structures establish roles for UDP-glucose dehydrogenase Ugd2, pyruvyl transferase Ptr2 and two glycosyltransferases.

Kasimova AA, Kenyon JJ, Arbatsky NP, Shashkov AS, Popova AV, Shneider MM, Knirel YA, Hall RM.

Glycobiology. 2018 Nov 1;28(11):876-884. doi: 10.1093/glycob/cwy074.

PMID:
30107435
17.

Genetics of biosynthesis and structure of the K53 capsular polysaccharide of Acinetobacter baumannii D23 made up of a disaccharide K unit.

Shashkov AS, Kenyon JJ, Arbatsky NP, Shneider MM, Popova AV, Knirel YA, Hall RM.

Microbiology. 2018 Oct;164(10):1289-1292. doi: 10.1099/mic.0.000710. Epub 2018 Aug 13.

PMID:
30102147
18.

Chemical characterization and serological properties of a unique O-polysaccharide of the Proteus mirabilis Sm 99 clinical strain - Identification of a new, O81, serotype.

Zabłotni A, Arbatsky NP, Drzewiecka D, Shashkov AS, Knirel YA.

Int J Biol Macromol. 2018 Oct 15;118(Pt A):1131-1135. doi: 10.1016/j.ijbiomac.2018.06.174. Epub 2018 Jul 2.

PMID:
30001599
19.

Investigation of O-polysaccharides from bacterial strains of Pseudomonas genus as potential receptors of bacteriophage BIM BV-45.

Zdorovenko EL, Besarab NV, Shashkov AS, Novik GI, Shirokov AA, Burov AM, Knirel YA.

Int J Biol Macromol. 2018 Oct 15;118(Pt A):1065-1072. doi: 10.1016/j.ijbiomac.2018.06.165. Epub 2018 Jun 30.

PMID:
29966669
20.

Structures of O-specific polysaccharides of Pseudomonas psyhrotolerans BIM B-1158G.

Zdorovenko EL, Shashkov AS, Kadykova AA, Kiseleva EP, Savich VV, Novik GI, Knirel YA.

Carbohydr Res. 2018 Jul 30;465:35-39. doi: 10.1016/j.carres.2018.06.006. Epub 2018 Jun 18.

PMID:
29929050
21.

Structure and gene cluster of the K125 capsular polysaccharide from Acinetobacter baumannii MAR13-1452.

Arbatsky NP, Shneider MM, Dmitrenok AS, Popova AV, Shagin DA, Shelenkov AA, Mikhailova YV, Edelstein MV, Knirel YA.

Int J Biol Macromol. 2018 Oct 1;117:1195-1199. doi: 10.1016/j.ijbiomac.2018.06.029. Epub 2018 Jun 7.

PMID:
29886169
22.

Structural studies on the O-polysaccharide of Escherichia coli O57.

Naumenko OI, Song J, Senchenkova SN, Jiang X, Perepelov AV, Shashkov AS, Knirel YA.

Carbohydr Res. 2018 Jul 30;465:1-3. doi: 10.1016/j.carres.2018.05.006. Epub 2018 May 19.

PMID:
29864581
23.

Structural and genetic relatedness of the O-antigens of Escherichia coli O50 and O2.

Yang B, Senchenkova SN, Naumenko OI, Shashkov AS, Liu B, Perepelov AV, Knirel YA.

Carbohydr Res. 2018 Jul 15;464:8-11. doi: 10.1016/j.carres.2018.05.001. Epub 2018 May 7.

PMID:
29787897
24.

Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18].

Zdorovenko EL, Golomidova AK, Prokhorov NS, Shashkov AS, Wang L, Letarov AV, Knirel YA.

Carbohydr Res. 2018 Jul 15;464:1. doi: 10.1016/j.carres.2018.04.013. Epub 2018 May 25. No abstract available.

PMID:
29775670
25.

O-Antigens of Escherichia coli Strains O81 and HS3-104 Are Structurally and Genetically Related, Except O-Antigen Glucosylation in E. coli HS3-104.

Zdorovenko EL, Wang Y, Shashkov AS, Chen T, Ovchinnikova OG, Liu B, Golomidova AK, Babenko VV, Letarov AV, Knirel YA.

Biochemistry (Mosc). 2018 May;83(5):534-541. doi: 10.1134/S0006297918050061.

26.

Structure and gene cluster of the O-antigen of Escherichia coli O54.

Naumenko OI, Guo X, Senchenkova SN, Geng P, Perepelov AV, Shashkov AS, Liu B, Knirel YA.

Carbohydr Res. 2018 Jun 15;462:34-38. doi: 10.1016/j.carres.2018.04.001. Epub 2018 Apr 5.

PMID:
29660546
27.

Studies on the O-polysaccharide of Escherichia albertii O2 characterized by non-stoichiometric O-acetylation and non-stoichiometric side-chain l-fucosylation.

Naumenko OI, Zheng H, Xiong Y, Senchenkova SN, Wang H, Shashkov AS, Li Q, Wang J, Knirel YA.

Carbohydr Res. 2018 May 22;461:80-84. doi: 10.1016/j.carres.2018.02.013. Epub 2018 Mar 6.

PMID:
29609101
28.

Repertoire of Abs primed by bacteria in gnotobiotic mice.

Khasbiullina NR, Shilova NV, Navakouski ME, Nokel AY, Knirel YA, Blixt O, Bovin NV.

Innate Immun. 2018 Apr;24(3):180-187. doi: 10.1177/1753425918763524. Epub 2018 Mar 16.

PMID:
29546786
29.

Hypoacylated LPS from Foodborne Pathogen Campylobacter jejuni Induces Moderate TLR4-Mediated Inflammatory Response in Murine Macrophages.

Korneev KV, Kondakova AN, Sviriaeva EN, Mitkin NA, Palmigiano A, Kruglov AA, Telegin GB, Drutskaya MS, Sturiale L, Garozzo D, Nedospasov SA, Knirel YA, Kuprash DV.

Front Cell Infect Microbiol. 2018 Feb 27;8:58. doi: 10.3389/fcimb.2018.00058. eCollection 2018.

30.

Full structure and insight into the gene cluster of the O-specific polysaccharide of Yersinia intermedia H9-36/83 (O:17).

Sizova OV, Shashkov AS, Kondakova AN, Knirel YA, Shaikhutdinova RZ, Ivanov SA, Kislichkina AA, Kadnikova LA, Bogun AG, Dentovskaya SV.

Carbohydr Res. 2018 May 2;460:51-56. doi: 10.1016/j.carres.2018.02.014. Epub 2018 Feb 28.

PMID:
29524727
31.

Structure and genetics of a glycerol 2-phosphate-containing O-specific polysaccharide of Escherichia coli O33.

Senchenkova SN, Hou W, Naumenko OI, Geng P, Shashkov AS, Perepelov AV, Yang B, Knirel YA.

Carbohydr Res. 2018 May 2;460:47-50. doi: 10.1016/j.carres.2018.02.008. Epub 2018 Feb 17.

PMID:
29524726
32.

Linear α-(1 → 6)-d-glucan from Bifidobacterium bifidum BIM В-733D is low molecular mass biopolymer with unique immunochemical properties.

Kiseleva EP, Mikhailopulo KI, Zdorovenko EL, Knirel YA, Novik GI.

Carbohydr Res. 2018 Aug;466:39-50. doi: 10.1016/j.carres.2017.12.008. Epub 2017 Dec 20.

PMID:
29422338
33.

Changes in the lipopolysaccharide of Proteus mirabilis 9B-m (O11a) clinical strain in response to planktonic or biofilm type of growth.

Zabłotni A, Matusiak D, Arbatsky NP, Moryl M, Maciejewska A, Kondakova AN, Shashkov AS, Ługowski C, Knirel YA, Różalski A.

Med Microbiol Immunol. 2018 Apr;207(2):129-139. doi: 10.1007/s00430-018-0534-5. Epub 2018 Jan 12.

34.

Structure elucidation of the O-specific polysaccharide by NMR spectroscopy and selective cleavage and genetic characterization of the O-antigen of Escherichia albertii O5.

Naumenko OI, Zheng H, Wang J, Senchenkova SN, Wang H, Shashkov AS, Chizhov AO, Li Q, Knirel YA, Xiong Y.

Carbohydr Res. 2018 Mar 2;457:25-31. doi: 10.1016/j.carres.2017.12.010. Epub 2018 Jan 3.

PMID:
29309918
35.

Structural analysis of the O-polysaccharide from the lipopolysaccharide of Pseudomonas putida BIM B-1100.

Zdorovenko EL, Shashkov AS, Kadykova AA, Kiseleva EP, Savich VV, Novik GI, Knirel YA.

Carbohydr Res. 2018 Mar 2;457:8-13. doi: 10.1016/j.carres.2017.12.009. Epub 2017 Dec 25.

PMID:
29304442
36.

Acinetobacter baumannii isolate BAL_212 from Vietnam produces the K57 capsular polysaccharide containing a rarely occurring amino sugar N-acetylviosamine.

Kenyon JJ, Kasimova AA, Shashkov AS, Hall RM, Knirel YA.

Microbiology. 2018 Feb;164(2):217-220. doi: 10.1099/mic.0.000598. Epub 2018 Jan 4.

PMID:
29300154
37.

Lipopolysaccharides of Pantoea agglomerans 7604 and 8674 with structurally related O-polysaccharide chains: Chemical identification and biological properties.

Zdorovenko EL, Kadykova AA, Shashkov AS, Varbanets LD, Bulyhina TV, Knirel YA.

Carbohydr Polym. 2018 Feb 1;181:386-393. doi: 10.1016/j.carbpol.2017.10.087. Epub 2017 Oct 26.

PMID:
29253987
38.

Structure and genetics of the O-specific polysaccharide of Escherichia coli O27.

Perepelov AV, Chen T, Senchenkova SN, Filatov AV, Song J, Shashkov AS, Liu B, Knirel YA.

Carbohydr Res. 2018 Feb 1;456:1-4. doi: 10.1016/j.carres.2017.11.016. Epub 2017 Dec 2.

PMID:
29220644
39.

The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.

Olszak T, Shneider MM, Latka A, Maciejewska B, Browning C, Sycheva LV, Cornelissen A, Danis-Wlodarczyk K, Senchenkova SN, Shashkov AS, Gula G, Arabski M, Wasik S, Miroshnikov KA, Lavigne R, Leiman PG, Knirel YA, Drulis-Kawa Z.

Sci Rep. 2017 Nov 24;7(1):16302. doi: 10.1038/s41598-017-16411-4.

40.

Acinetobacter baumannii K13 and K73 capsular polysaccharides differ only in K-unit side branches of novel non-2-ulosonic acids: di-N-acetylated forms of either acinetaminic acid or 8-epiacinetaminic acid.

Kenyon JJ, Kasimova AA, Notaro A, Arbatsky NP, Speciale I, Shashkov AS, De Castro C, Hall RM, Knirel YA.

Carbohydr Res. 2017 Nov 27;452:149-155. doi: 10.1016/j.carres.2017.10.005. Epub 2017 Oct 19.

PMID:
29100177
41.

The O-antigen structure of bacterium Comamonas aquatica CJG.

Wang X, Kondakova AN, Zhu Y, Knirel YA, Han A.

Microbiology. 2017 Nov;163(11):1637-1640. doi: 10.1099/mic.0.000551. Epub 2017 Oct 16.

PMID:
29034863
42.

Erratum to: Re-classification within the serogroups O3 and O8 of Citrobacter strains.

Katzenellenbogen E, Staniszewska M, Kocharova NA, Mieszała M, Korzeniowska-Kowal A, Górska S, Knirel YA, Gamian A.

BMC Microbiol. 2017 Aug 17;17(1):173. doi: 10.1186/s12866-017-1082-7. No abstract available.

43.

Genetic diversity of the O antigens of Proteus species and the development of a suspension array for molecular serotyping.

Yu X, Torzewska A, Zhang X, Yin Z, Drzewiecka D, Cao H, Liu B, Knirel YA, Rozalski A, Wang L.

PLoS One. 2017 Aug 17;12(8):e0183267. doi: 10.1371/journal.pone.0183267. eCollection 2017.

44.

Re-classification within the serogroups O3 and O8 of Citrobacter strains.

Katzenellenbogen E, Staniszewska M, Kocharova NA, Mieszała M, Korzeniowska-Kowal A, Górska S, Knirel YA, Gamian A.

BMC Microbiol. 2017 Jul 27;17(1):169. doi: 10.1186/s12866-017-1078-3. Erratum in: BMC Microbiol. 2017 Aug 17;17 (1):173.

45.

Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7.

Naumenko OI, Zheng H, Senchenkova SN, Wang H, Li Q, Shashkov AS, Wang J, Knirel YA, Xiong Y.

Carbohydr Res. 2017 Sep 8;449:17-22. doi: 10.1016/j.carres.2017.06.008. Epub 2017 Jun 17.

PMID:
28672166
46.

Structure and gene cluster of the O-antigen of Enterobacter cloacae C4115.

Perepelov AV, Xu G, Filatov AV, Zhang X, Shashkov AS, Wang M, Knirel YA.

Carbohydr Res. 2017 Aug 7;448:110-114. doi: 10.1016/j.carres.2017.05.021. Epub 2017 Jun 3.

PMID:
28645003
47.

Studies on the O-specific polysaccharide of the lipopolysaccharide from the Pseudomonas mediterranea strain C5P1rad1, a bacterium pathogenic of tomato and chrysanthemum.

Zdorovenko EL, Cimmino A, Marchi G, Shashkov AS, Fiori M, Knirel YA, Evidente A.

Carbohydr Res. 2017 Aug 7;448:48-51. doi: 10.1016/j.carres.2017.05.019. Epub 2017 Jun 1.

PMID:
28601025
48.

Structures of the K35 and K15 capsular polysaccharides of Acinetobacter baumannii LUH5535 and LUH5554 containing amino and diamino uronic acids.

Shashkov AS, Liu B, Kenyon JJ, Popova AV, Shneider MM, Senchenkova SN, Arbatsky NP, Miroshnikov KA, Wang L, Knirel YA.

Carbohydr Res. 2017 Aug 7;448:28-34. doi: 10.1016/j.carres.2017.05.017. Epub 2017 May 25.

PMID:
28578199
49.

Structural studies of the O-specific polysaccharide from detergent degrading bacteria Pseudomonas putida TSh-18.

Sigida EN, Fedonenko YP, Shashkov AS, Zdorovenko EL, Ignatov VV, Knirel YA.

Carbohydr Res. 2017 Aug 7;448:1-5. doi: 10.1016/j.carres.2017.05.013. Epub 2017 May 22.

PMID:
28554122
50.

Acinetobacter baumannii K11 and K83 capsular polysaccharides have the same 6-deoxy-l-talose-containing pentasaccharide K units but different linkages between the K units.

Kenyon JJ, Shashkov AS, Senchenkova SN, Shneider MM, Liu B, Popova AV, Arbatsky NP, Miroshnikov KA, Wang L, Knirel YA, Hall RM.

Int J Biol Macromol. 2017 Oct;103:648-655. doi: 10.1016/j.ijbiomac.2017.05.082. Epub 2017 May 17.

PMID:
28528003

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