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Items: 23

1.

The role of SLX4 and its associated nucleases in DNA interstrand crosslink repair.

Hoogenboom WS, Boonen RACM, Knipscheer P.

Nucleic Acids Res. 2019 Mar 18;47(5):2377-2388. doi: 10.1093/nar/gky1276.

2.

Vasohibins encode tubulin detyrosinating activity.

Nieuwenhuis J, Adamopoulos A, Bleijerveld OB, Mazouzi A, Stickel E, Celie P, Altelaar M, Knipscheer P, Perrakis A, Blomen VA, Brummelkamp TR.

Science. 2017 Dec 15;358(6369):1453-1456. doi: 10.1126/science.aao5676. Epub 2017 Nov 16.

PMID:
29146869
3.

Xenopus egg extract: A powerful tool to study genome maintenance mechanisms.

Hoogenboom WS, Klein Douwel D, Knipscheer P.

Dev Biol. 2017 Aug 15;428(2):300-309. doi: 10.1016/j.ydbio.2017.03.033. Epub 2017 Apr 17. Review.

4.

Recruitment and positioning determine the specific role of the XPF-ERCC1 endonuclease in interstrand crosslink repair.

Klein Douwel D, Hoogenboom WS, Boonen RA, Knipscheer P.

EMBO J. 2017 Jul 14;36(14):2034-2046. doi: 10.15252/embj.201695223. Epub 2017 Mar 14.

5.

FANCJ promotes DNA synthesis through G-quadruplex structures.

Castillo Bosch P, Segura-Bayona S, Koole W, van Heteren JT, Dewar JM, Tijsterman M, Knipscheer P.

EMBO J. 2014 Nov 3;33(21):2521-33. doi: 10.15252/embj.201488663. Epub 2014 Sep 5.

6.

XPF-ERCC1 acts in Unhooking DNA interstrand crosslinks in cooperation with FANCD2 and FANCP/SLX4.

Klein Douwel D, Boonen RA, Long DT, Szypowska AA, Räschle M, Walter JC, Knipscheer P.

Mol Cell. 2014 May 8;54(3):460-71. doi: 10.1016/j.molcel.2014.03.015. Epub 2014 Apr 10.

7.

Replication-coupled DNA interstrand cross-link repair in Xenopus egg extracts.

Knipscheer P, Räschle M, Schärer OD, Walter JC.

Methods Mol Biol. 2012;920:221-43. doi: 10.1007/978-1-61779-998-3_16.

8.

The Fanconi anemia pathway promotes replication-dependent DNA interstrand cross-link repair.

Knipscheer P, Räschle M, Smogorzewska A, Enoiu M, Ho TV, Schärer OD, Elledge SJ, Walter JC.

Science. 2009 Dec 18;326(5960):1698-701. doi: 10.1126/science.1182372. Epub 2009 Nov 12.

9.

Preparation of sumoylated substrates for biochemical analysis.

Knipscheer P, Klug H, Sixma TK, Pichler A.

Methods Mol Biol. 2009;497:201-10. doi: 10.1007/978-1-59745-566-4_13. Review.

PMID:
19107419
10.

Mechanism of replication-coupled DNA interstrand crosslink repair.

Räschle M, Knipscheer P, Enoiu M, Angelov T, Sun J, Griffith JD, Ellenberger TE, Schärer OD, Walter JC.

Cell. 2008 Sep 19;134(6):969-80. doi: 10.1016/j.cell.2008.08.030. Erratum in: Cell.2009 May 29;137(5):972. Knipsheer, Puck [corrected to Knipscheer, Puck].

11.

Ubc9 sumoylation regulates SUMO target discrimination.

Knipscheer P, Flotho A, Klug H, Olsen JV, van Dijk WJ, Fish A, Johnson ES, Mann M, Sixma TK, Pichler A.

Mol Cell. 2008 Aug 8;31(3):371-82. doi: 10.1016/j.molcel.2008.05.022.

12.

SUMO assay with peptide arrays on solid support: insights into SUMO target sites.

Schwamborn K, Knipscheer P, van Dijk E, van Dijk WJ, Sixma TK, Meloen RH, Langedijk JP.

J Biochem. 2008 Jul;144(1):39-49. doi: 10.1093/jb/mvn039. Epub 2008 Mar 15.

PMID:
18344540
13.

ARP/wARP and molecular replacement: the next generation.

Cohen SX, Ben Jelloul M, Long F, Vagin A, Knipscheer P, Lebbink J, Sixma TK, Lamzin VS, Murshudov GN, Perrakis A.

Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):49-60. Epub 2007 Dec 5.

14.

Protein-protein interactions regulate Ubl conjugation.

Knipscheer P, Sixma TK.

Curr Opin Struct Biol. 2007 Dec;17(6):665-73. Epub 2007 Oct 15.

PMID:
17933515
15.

Noncovalent interaction between Ubc9 and SUMO promotes SUMO chain formation.

Knipscheer P, van Dijk WJ, Olsen JV, Mann M, Sixma TK.

EMBO J. 2007 Jun 6;26(11):2797-807. Epub 2007 May 10.

16.

Co-expression of protein complexes in prokaryotic and eukaryotic hosts: experimental procedures, database tracking and case studies.

Romier C, Ben Jelloul M, Albeck S, Buchwald G, Busso D, Celie PH, Christodoulou E, De Marco V, van Gerwen S, Knipscheer P, Lebbink JH, Notenboom V, Poterszman A, Rochel N, Cohen SX, Unger T, Sussman JL, Moras D, Sixma TK, Perrakis A.

Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1232-42. Epub 2006 Sep 19.

PMID:
17001100
17.

Divide and conquer: the E2 active site.

Knipscheer P, Sixma TK.

Nat Struct Mol Biol. 2006 Jun;13(6):474-6. No abstract available.

PMID:
16757944
18.

Structure of the cyclic-AMP-responsive exchange factor Epac2 in its auto-inhibited state.

Rehmann H, Das J, Knipscheer P, Wittinghofer A, Bos JL.

Nature. 2006 Feb 2;439(7076):625-8.

PMID:
16452984
19.

SUMO modification of the ubiquitin-conjugating enzyme E2-25K.

Pichler A, Knipscheer P, Oberhofer E, van Dijk WJ, Körner R, Olsen JV, Jentsch S, Melchior F, Sixma TK.

Nat Struct Mol Biol. 2005 Mar;12(3):264-9. Epub 2005 Feb 20.

PMID:
15723079
20.

The RanBP2 SUMO E3 ligase is neither HECT- nor RING-type.

Pichler A, Knipscheer P, Saitoh H, Sixma TK, Melchior F.

Nat Struct Mol Biol. 2004 Oct;11(10):984-91. Epub 2004 Sep 19.

PMID:
15378033
21.

The dechlorination of cyclodiene pesticides by methanogenic granular sludge.

Baczynski TP, Grotenhuis T, Knipscheer P.

Chemosphere. 2004 May;55(5):653-9.

PMID:
15013670
22.

Evidence for two interacting ligand binding sites in human multidrug resistance protein 2 (ATP binding cassette C2).

Zelcer N, Huisman MT, Reid G, Wielinga P, Breedveld P, Kuil A, Knipscheer P, Schellens JH, Schinkel AH, Borst P.

J Biol Chem. 2003 Jun 27;278(26):23538-44. Epub 2003 Apr 17.

23.

High-throughput retroviral tagging to identify components of specific signaling pathways in cancer.

Mikkers H, Allen J, Knipscheer P, Romeijn L, Hart A, Vink E, Berns A.

Nat Genet. 2002 Sep;32(1):153-9. Epub 2002 Aug 19. Erratum in: Nat Genet 2002 Nov;32(3):459. Romeyn Lieke [corrected to Romeijn Like]. Nat Genet 2002 Oct;32(2):331.

PMID:
12185366

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