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Items: 26

1.

Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.

Weigand MR, Peng Y, Batra D, Burroughs M, Davis JK, Knipe K, Loparev VN, Johnson T, Juieng P, Rowe LA, Sheth M, Tang K, Unoarumhi Y, Williams MM, Tondella ML.

mSystems. 2019 Nov 19;4(6). pii: e00702-19. doi: 10.1128/mSystems.00702-19.

2.

Conjugal Transfer, Whole-Genome Sequencing, and Plasmid Analysis of Four mcr-1-Bearing Isolates from U.S. Patients.

Zhu W, Lawsin A, Lindsey RL, Batra D, Knipe K, Yoo BB, Perry KA, Rowe LA, Lonsway D, Walters MS, Rasheed JK, Halpin AL.

Antimicrob Agents Chemother. 2019 Mar 27;63(4). pii: e02417-18. doi: 10.1128/AAC.02417-18. Print 2019 Apr.

3.

High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing.

Kim J, Lindsey RL, Garcia-Toledo L, Loparev VN, Rowe LA, Batra D, Juieng P, Stoneburg D, Martin H, Knipe K, Smith P, Strockbine N.

Genome Announc. 2018 Apr 12;6(15). pii: e00282-18. doi: 10.1128/genomeA.00282-18.

4.

Distinct evolutionary patterns of Neisseria meningitidis serogroup B disease outbreaks at two universities in the USA.

Hao L, Holden MTG, Wang X, Andrew L, Wellnitz S, Hu F, Whaley M, Sammons S, Knipe K, Frace M, McNamara LA, Liberator P, Anderson AS.

Microb Genom. 2018 Apr;4(4). doi: 10.1099/mgen.0.000155. Epub 2018 Apr 4.

5.

Screening and Genomic Characterization of Filamentous Hemagglutinin-Deficient Bordetella pertussis.

Weigand MR, Pawloski LC, Peng Y, Ju H, Burroughs M, Cassiday PK, Davis JK, DuVall M, Johnson T, Juieng P, Knipe K, Loparev VN, Mathis MH, Rowe LA, Sheth M, Williams MM, Tondella ML.

Infect Immun. 2018 Mar 22;86(4). pii: e00869-17. doi: 10.1128/IAI.00869-17. Print 2018 Apr.

6.

High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing.

Smith P, Lindsey RL, Rowe LA, Batra D, Stripling D, Garcia-Toledo L, Drapeau D, Knipe K, Strockbine N.

Genome Announc. 2018 Jan 11;6(2). pii: e01311-17. doi: 10.1128/genomeA.01311-17.

7.

High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping.

Schroeder MR, Juieng P, Batra D, Knipe K, Rowe LA, Sheth M, Smith P, Garcia-Toledo L, Loparev VN, Lindsey RL.

Genome Announc. 2018 Jan 4;6(1). pii: e01384-17. doi: 10.1128/genomeA.01384-17.

8.

High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States.

Lindsey RL, Batra D, Rowe L, Loparev VN, Stripling D, Garcia-Toledo L, Knipe K, Juieng P, Sheth M, Martin H, Laufer Halpin A.

Genome Announc. 2017 Mar 16;5(11). pii: e01725-16. doi: 10.1128/genomeA.01725-16.

9.

The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement.

Weigand MR, Peng Y, Loparev V, Batra D, Bowden KE, Burroughs M, Cassiday PK, Davis JK, Johnson T, Juieng P, Knipe K, Mathis MH, Pruitt AM, Rowe L, Sheth M, Tondella ML, Williams MM.

J Bacteriol. 2017 Mar 28;199(8). pii: e00806-16. doi: 10.1128/JB.00806-16. Print 2017 Apr 15.

10.

The Establishment and Diversification of Epidemic-Associated Serogroup W Meningococcus in the African Meningitis Belt, 1994 to 2012.

Retchless AC, Hu F, Ouédraogo AS, Diarra S, Knipe K, Sheth M, Rowe LA, Sangaré L, Ky Ba A, Ouangraoua S, Batra D, Novak RT, Ouédraogo Traoré R, Wang X.

mSphere. 2016 Nov 16;1(6). pii: e00201-16. eCollection 2016 Nov-Dec.

11.

Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67).

Bugrysheva JV, Cherney B, Sue D, Conley AB, Rowe LA, Knipe KM, Frace MA, Loparev VN, Avila JR, Anderson K, Hodge DR, Pillai SP, Weigel LM.

Genome Announc. 2016 Nov 17;4(6). pii: e01294-16. doi: 10.1128/genomeA.01294-16.

12.

High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps.

Lindsey RL, Rowe L, Garcia-Toledo L, Loparev V, Knipe K, Stripling D, Martin H, Trees E, Juieng P, Batra D, Strockbine N.

Genome Announc. 2016 Jun 30;4(3). pii: e00626-16. doi: 10.1128/genomeA.00626-16.

13.

Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak.

Nicholson AC, Whitney AM, Emery BD, Bell ME, Gartin JT, Humrighouse BW, Loparev VN, Batra D, Sheth M, Rowe LA, Juieng P, Knipe K, Gulvik C, McQuiston JR.

Genome Announc. 2016 Jun 16;4(3). pii: e00563-16. doi: 10.1128/genomeA.00563-16.

14.

Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics.

Bowden KE, Weigand MR, Peng Y, Cassiday PK, Sammons S, Knipe K, Rowe LA, Loparev V, Sheth M, Weening K, Tondella ML, Williams MM.

mSphere. 2016 May 11;1(3). pii: e00036-16. doi: 10.1128/mSphere.00036-16. eCollection 2016 May-Jun.

15.

Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25.

Lindsey RL, Knipe K, Rowe L, Garcia-Toledo L, Loparev V, Juieng P, Trees E, Strockbine N, Stripling D, Gerner-Smidt P.

Genome Announc. 2015 Dec 17;3(6). pii: e01496-15. doi: 10.1128/genomeA.01496-15.

16.

Finished Annotated Genome Sequence of Burkholderia pseudomallei Strain Bp1651, a Multidrug-Resistant Clinical Isolate.

Bugrysheva JV, Sue D, Hakovirta J, Loparev VN, Knipe K, Sammons SA, Ranganathan-Ganakammal S, Changayil S, Srinivasamoorthy G, Weil MR, Tatusov RL, Gee JE, Elrod MG, Hoffmaster AR, Weigel LM.

Genome Announc. 2015 Dec 3;3(6). pii: e01427-15. doi: 10.1128/genomeA.01427-15.

17.

Comparative genomic analysis reveals occurrence of genetic recombination in virulent Cryptosporidium hominis subtypes and telomeric gene duplications in Cryptosporidium parvum.

Guo Y, Tang K, Rowe LA, Li N, Roellig DM, Knipe K, Frace M, Yang C, Feng Y, Xiao L.

BMC Genomics. 2015 Apr 18;16:320. doi: 10.1186/s12864-015-1517-1.

18.

Genome Sequences of Vibrio navarrensis, a Potential Human Pathogen.

Gladney LM, Katz LS, Knipe KM, Rowe LA, Conley AB, Rishishwar L, Mariño-Ramírez L, Jordan IK, Tarr CL.

Genome Announc. 2014 Nov 20;2(6). pii: e01188-14. doi: 10.1128/genomeA.01188-14.

19.

Multidrug-resistant IncA/C plasmid in Vibrio cholerae from Haiti.

Folster JP, Katz L, McCullough A, Parsons MB, Knipe K, Sammons SA, Boncy J, Tarr CL, Whichard JM.

Emerg Infect Dis. 2014 Nov;20(11):1951-3. doi: 10.3201/eid2011.140889. No abstract available.

20.

Strain response of thermal barrier coatings captured under extreme engine environments through synchrotron X-ray diffraction.

Knipe K, Manero A 2nd, Siddiqui SF, Meid C, Wischek J, Okasinski J, Almer J, Karlsson AM, Bartsch M, Raghavan S.

Nat Commun. 2014 Jul 31;5:4559. doi: 10.1038/ncomms5559.

PMID:
25078347
21.

vanG element insertions within a conserved chromosomal site conferring vancomycin resistance to Streptococcus agalactiae and Streptococcus anginosus.

Srinivasan V, Metcalf BJ, Knipe KM, Ouattara M, McGee L, Shewmaker PL, Glennen A, Nichols M, Harris C, Brimmage M, Ostrowsky B, Park CJ, Schrag SJ, Frace MA, Sammons SA, Beall B.

mBio. 2014 Jul 22;5(4):e01386-14. doi: 10.1128/mBio.01386-14.

22.

Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains.

Lindsey RL, Trees E, Sammons S, Loparev V, Frace M, Strockbine N, Sabol AL, Sowers E, Stripling D, Martin H, Knipe K, Rowe L, Gerner-Smidt P.

Genome Announc. 2014 Jul 10;2(4). pii: e00501-14. doi: 10.1128/genomeA.00501-14.

23.

Synchrotron X-ray measurement techniques for thermal barrier coated cylindrical samples under thermal gradients.

Siddiqui SF, Knipe K, Manero A, Meid C, Wischek J, Okasinski J, Almer J, Karlsson AM, Bartsch M, Raghavan S.

Rev Sci Instrum. 2013 Aug;84(8):083904. doi: 10.1063/1.4817543.

PMID:
24007076
24.

Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus.

Jordan IK, Conley AB, Antonov IV, Arthur RA, Cook ED, Cooper GP, Jones BL, Knipe KM, Lee KJ, Liu X, Mitchell GJ, Pande PR, Petit RA, Qin S, Rajan VN, Sarda S, Sebastian A, Tang S, Thapliyal R, Varghese NJ, Ye T, Katz LS, Wang X, Rowe L, Frace M, Mayer LW.

J Bacteriol. 2011 Oct;193(20):5879-80. doi: 10.1128/JB.05863-11.

25.
26.

Aneurysmal bone cyst of the mandible.

Giddings NA, Kennedy TL, Knipe KL, Levine HL, Smith JD.

Arch Otolaryngol Head Neck Surg. 1989 Jul;115(7):865-70. Review.

PMID:
2660854

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