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Design principles for decoding calcium signals to generate specific gene expression via transcription.

Liu J, Lenzoni G, Knight MR.

Plant Physiol. 2019 Nov 19. pii: pp.01003.2019. doi: 10.1104/pp.19.01003. [Epub ahead of print]


MUR1-mediated cell-wall fucosylation is required for freezing tolerance in Arabidopsis thaliana.

Panter PE, Kent O, Dale M, Smith SJ, Skipsey M, Thorlby G, Cummins I, Ramsay N, Begum RA, Sanhueza D, Fry SC, Knight MR, Knight H.

New Phytol. 2019 Dec;224(4):1518-1531. doi: 10.1111/nph.16209.


The identification of small molecule inhibitors of the plant inositol phosphorylceramide synthase which demonstrate herbicidal activity.

Pinneh EC, Mina JG, Stark MJR, Lindell SD, Luemmen P, Knight MR, Steel PG, Denny PW.

Sci Rep. 2019 May 30;9(1):8083. doi: 10.1038/s41598-019-44544-1.


Expression levels of inositol phosphorylceramide synthase modulate plant responses to biotic and abiotic stress in Arabidopsis thaliana.

Pinneh EC, Stoppel R, Knight H, Knight MR, Steel PG, Denny PW.

PLoS One. 2019 May 23;14(5):e0217087. doi: 10.1371/journal.pone.0217087. eCollection 2019.


Leaves of isoprene-emitting tobacco plants maintain PSII stability at high temperatures.

Pollastri S, Jorba I, Hawkins TJ, Llusià J, Michelozzi M, Navajas D, Peñuelas J, Hussey PJ, Knight MR, Loreto F.

New Phytol. 2019 Aug;223(3):1307-1318. doi: 10.1111/nph.15847. Epub 2019 May 15.


Increases in Absolute Temperature Stimulate Free Calcium Concentration Elevations in the Chloroplast.

Lenzoni G, Knight MR.

Plant Cell Physiol. 2019 Mar 1;60(3):538-548. doi: 10.1093/pcp/pcy227.


OXI1 kinase plays a key role in resistance of Arabidopsis towards aphids (Myzus persicae).

Shoala T, Edwards MG, Knight MR, Gatehouse AMR.

Transgenic Res. 2018 Aug;27(4):355-366. doi: 10.1007/s11248-018-0078-x. Epub 2018 May 17.


Predicting plant immunity gene expression by identifying the decoding mechanism of calcium signatures.

Lenzoni G, Liu J, Knight MR.

New Phytol. 2018 Mar;217(4):1598-1609. doi: 10.1111/nph.14924. Epub 2017 Dec 8.


Transcriptomic analysis comparing stay-green and senescent Sorghum bicolor lines identifies a role for proline biosynthesis in the stay-green trait.

Johnson SM, Cummins I, Lim FL, Slabas AR, Knight MR.

J Exp Bot. 2015 Dec;66(22):7061-73. doi: 10.1093/jxb/erv405. Epub 2015 Aug 28.


The Potato Nucleotide-binding Leucine-rich Repeat (NLR) Immune Receptor Rx1 Is a Pathogen-dependent DNA-deforming Protein.

Fenyk S, Townsend PD, Dixon CH, Spies GB, de San Eustaquio Campillo A, Slootweg EJ, Westerhof LB, Gawehns FK, Knight MR, Sharples GJ, Goverse A, Pålsson LO, Takken FL, Cann MJ.

J Biol Chem. 2015 Oct 9;290(41):24945-60. doi: 10.1074/jbc.M115.672121. Epub 2015 Aug 25.


Clinical evaluation of the Nucleus 6 cochlear implant system: performance improvements with SmartSound iQ.

Mauger SJ, Warren CD, Knight MR, Goorevich M, Nel E.

Int J Audiol. 2014 Aug;53(8):564-76. doi: 10.3109/14992027.2014.895431.


Transcriptomic analysis of Sorghum bicolor responding to combined heat and drought stress.

Johnson SM, Lim FL, Finkler A, Fromm H, Slabas AR, Knight MR.

BMC Genomics. 2014 Jun 10;15:456. doi: 10.1186/1471-2164-15-456.


The Arabidopsis mediator complex subunits MED16, MED14, and MED2 regulate mediator and RNA polymerase II recruitment to CBF-responsive cold-regulated genes.

Hemsley PA, Hurst CH, Kaliyadasa E, Lamb R, Knight MR, De Cothi EA, Steele JF, Knight H.

Plant Cell. 2014 Jan;26(1):465-84. doi: 10.1105/tpc.113.117796. Epub 2014 Jan 10.


Calcium signatures are decoded by plants to give specific gene responses.

Whalley HJ, Knight MR.

New Phytol. 2013 Feb;197(3):690-3. doi: 10.1111/nph.12087. Epub 2012 Nov 28. No abstract available.


Low-temperature perception leading to gene expression and cold tolerance in higher plants.

Knight MR, Knight H.

New Phytol. 2012 Sep;195(4):737-51. doi: 10.1111/j.1469-8137.2012.04239.x. Epub 2012 Jul 23. Review.


Modelling and experimental analysis of the role of interacting cytosolic and vacuolar pools in shaping low temperature calcium signatures in plant cells.

Liu J, Knight H, Hurst CH, Knight MR.

Mol Biosyst. 2012 Aug;8(8):2205-20. doi: 10.1039/c2mb25072a. Epub 2012 Jun 21.


ERF5 and ERF6 play redundant roles as positive regulators of JA/Et-mediated defense against Botrytis cinerea in Arabidopsis.

Moffat CS, Ingle RA, Wathugala DL, Saunders NJ, Knight H, Knight MR.

PLoS One. 2012;7(4):e35995. doi: 10.1371/journal.pone.0035995. Epub 2012 Apr 26.


Internal iliac artery injury and total hip arthroplasty: discovery after 10 years.

Kong EL, Knight MR.

J Arthroplasty. 2013 Jan;28(1):196.e15-7. doi: 10.1016/j.arth.2012.02.027. Epub 2012 May 4.


The Mediator subunit SFR6/MED16 controls defence gene expression mediated by salicylic acid and jasmonate responsive pathways.

Wathugala DL, Hemsley PA, Moffat CS, Cremelie P, Knight MR, Knight H.

New Phytol. 2012 Jul;195(1):217-30. doi: 10.1111/j.1469-8137.2012.04138.x. Epub 2012 Apr 11.


A toolset of aequorin expression vectors for in planta studies of subcellular calcium concentrations in Arabidopsis thaliana.

Mehlmer N, Parvin N, Hurst CH, Knight MR, Teige M, Vothknecht UC.

J Exp Bot. 2012 Feb;63(4):1751-61. doi: 10.1093/jxb/err406. Epub 2012 Jan 2.


Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis.

Whalley HJ, Sargeant AW, Steele JF, Lacoere T, Lamb R, Saunders NJ, Knight H, Knight MR.

Plant Cell. 2011 Nov;23(11):4079-95. doi: 10.1105/tpc.111.090480. Epub 2011 Nov 15.


OsSFR6 is a functional rice orthologue of SENSITIVE TO FREEZING-6 and can act as a regulator of COR gene expression, osmotic stress and freezing tolerance in Arabidopsis.

Wathugala DL, Richards SA, Knight H, Knight MR.

New Phytol. 2011 Sep;191(4):984-95. doi: 10.1111/j.1469-8137.2011.03759.x. Epub 2011 May 17.


The phosphoproteome of Arabidopsis plants lacking the oxidative signal-inducible1 (OXI1) protein kinase.

Howden AJ, Salek M, Miguet L, Pullen M, Thomas B, Knight MR, Sweetlove LJ.

New Phytol. 2011 Apr;190(1):49-56. doi: 10.1111/j.1469-8137.2010.03582.x. Epub 2010 Dec 22.


Calmodulin-binding transcription activator 1 mediates auxin signaling and responds to stresses in Arabidopsis.

Galon Y, Aloni R, Nachmias D, Snir O, Feldmesser E, Scrase-Field S, Boyce JM, Bouché N, Knight MR, Fromm H.

Planta. 2010 Jun;232(1):165-78. doi: 10.1007/s00425-010-1153-6. Epub 2010 Apr 10.


OXI1 protein kinase is required for plant immunity against Pseudomonas syringae in Arabidopsis.

Petersen LN, Ingle RA, Knight MR, Denby KJ.

J Exp Bot. 2009;60(13):3727-35. doi: 10.1093/jxb/erp219. Epub 2009 Jul 2.


The alpha-subunit of the heterotrimeric G-protein affects jasmonate responses in Arabidopsis thaliana.

Okamoto H, Göbel C, Capper RG, Saunders N, Feussner I, Knight MR.

J Exp Bot. 2009;60(7):1991-2003. doi: 10.1093/jxb/erp060. Epub 2009 Apr 2.


Identification of SFR6, a key component in cold acclimation acting post-translationally on CBF function.

Knight H, Mugford SG, Ulker B, Gao D, Thorlby G, Knight MR.

Plant J. 2009 Apr;58(1):97-108. doi: 10.1111/j.1365-313X.2008.03763.x. Epub 2009 Jan 5.


Getting the most out of publicly available T-DNA insertion lines.

Ulker B, Peiter E, Dixon DP, Moffat C, Capper R, Bouché N, Edwards R, Sanders D, Knight H, Knight MR.

Plant J. 2008 Nov;56(4):665-77. doi: 10.1111/j.1365-313X.2008.03608.x. Epub 2008 Jul 4.


Bacterial polysaccharides suppress induced innate immunity by calcium chelation.

Aslam SN, Newman MA, Erbs G, Morrissey KL, Chinchilla D, Boller T, Jensen TT, De Castro C, Ierano T, Molinaro A, Jackson RW, Knight MR, Cooper RM.

Curr Biol. 2008 Jul 22;18(14):1078-83. doi: 10.1016/j.cub.2008.06.061.


Calmodulin-binding transcription activator (CAMTA) 3 mediates biotic defense responses in Arabidopsis.

Galon Y, Nave R, Boyce JM, Nachmias D, Knight MR, Fromm H.

FEBS Lett. 2008 Mar 19;582(6):943-8. doi: 10.1016/j.febslet.2008.02.037. Epub 2008 Feb 25.


New ideas on root hair growth appear from the flanks.

Knight MR.

Proc Natl Acad Sci U S A. 2007 Dec 26;104(52):20649-50. Epub 2007 Dec 19. No abstract available.


Clinical evaluation of expanded input dynamic range in Nucleus cochlear implants.

Dawson PW, Vandali AE, Knight MR, Heasman JM.

Ear Hear. 2007 Apr;28(2):163-76.


Nucleotide depletion and chloroplast division.

Garton S, Knight H, Knight MR, Thorlby GJ.

Plant Signal Behav. 2007 May;2(3):197-8.


Rapid transcriptome changes induced by cytosolic Ca2+ transients reveal ABRE-related sequences as Ca2+-responsive cis elements in Arabidopsis.

Kaplan B, Davydov O, Knight H, Galon Y, Knight MR, Fluhr R, Fromm H.

Plant Cell. 2006 Oct;18(10):2733-48. Epub 2006 Sep 15. Erratum in: Plant Cell. 2007 Feb;19(2):725.


The identification of genes involved in the stomatal response to reduced atmospheric relative humidity.

Xie X, Wang Y, Williamson L, Holroyd GH, Tagliavia C, Murchie E, Theobald J, Knight MR, Davies WJ, Leyser HM, Hetherington AM.

Curr Biol. 2006 May 9;16(9):882-7.


Psychophysical measures in patients fitted with Contour and straight Nucleus electrode arrays.

Cohen LT, Saunders E, Knight MR, Cowan RS.

Hear Res. 2006 Feb;212(1-2):160-75. Epub 2006 Jan 5.


Angry faces get noticed quickly: threat detection is not impaired among older adults.

Mather M, Knight MR.

J Gerontol B Psychol Sci Soc Sci. 2006 Jan;61(1):P54-7.


Heat stress phenotypes of Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermotolerance.

Larkindale J, Hall JD, Knight MR, Vierling E.

Plant Physiol. 2005 Jun;138(2):882-97. Epub 2005 May 27.


Ceramides induce programmed cell death in Arabidopsis cells in a calcium-dependent manner.

Townley HE, McDonald K, Jenkins GI, Knight MR, Leaver CJ.

Biol Chem. 2005 Feb;386(2):161-6.


ROS perception in Arabidopsis thaliana: the ozone-induced calcium response.

Evans NH, McAinsh MR, Hetherington AM, Knight MR.

Plant J. 2005 Feb;41(4):615-26.


Regulation of calcium signalling and gene expression by glutathione.

Gomez LD, Noctor G, Knight MR, Foyer CH.

J Exp Bot. 2004 Aug;55(404):1851-9. Epub 2004 Jul 30.


Abscisic acid induces CBF gene transcription and subsequent induction of cold-regulated genes via the CRT promoter element.

Knight H, Zarka DG, Okamoto H, Thomashow MF, Knight MR.

Plant Physiol. 2004 Jul;135(3):1710-7. Epub 2004 Jul 9.


Oxidative stress-induced calcium signaling in Arabidopsis.

Rentel MC, Knight MR.

Plant Physiol. 2004 Jul;135(3):1471-9. Epub 2004 Jul 9.


Salt and osmotic stress cause rapid increases in Arabidopsis thaliana cGMP levels.

Donaldson L, Ludidi N, Knight MR, Gehring C, Denby K.

FEBS Lett. 2004 Jul 2;569(1-3):317-20.


Calcium measurement in living filamentous fungi expressing codon-optimized aequorin.

Nelson G, Kozlova-Zwinderman O, Collis AJ, Knight MR, Fincham JR, Stanger CP, Renwick A, Hessing JG, Punt PJ, van den Hondel CA, Read ND.

Mol Microbiol. 2004 Jun;52(5):1437-50.


OXI1 kinase is necessary for oxidative burst-mediated signalling in Arabidopsis.

Rentel MC, Lecourieux D, Ouaked F, Usher SL, Petersen L, Okamoto H, Knight H, Peck SC, Grierson CS, Hirt H, Knight MR.

Nature. 2004 Feb 26;427(6977):858-61.


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