Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 106

1.

On the Mechanism of the Asymmetric Aldol Addition of Chiral N-Amino Cyclic Carbamate Hydrazones: Evidence of Non-Curtin-Hammett Behavior.

Uddin MN, Knight JD, Rastelli EJ, Soubra-Ghaoui C, Albright TA, Wu CH, Wu JI, Coltart DM.

Chemistry. 2019 Oct 25. doi: 10.1002/chem.201902388. [Epub ahead of print]

PMID:
31650641
2.

Properties of Stress Granule and P-Body Proteomes.

Youn JY, Dyakov BJA, Zhang J, Knight JDR, Vernon RM, Forman-Kay JD, Gingras AC.

Mol Cell. 2019 Oct 17;76(2):286-294. doi: 10.1016/j.molcel.2019.09.014. Review.

PMID:
31626750
3.

Investigating Instructor Talk in Novel Contexts: Widespread Use, Unexpected Categories, and an Emergent Sampling Strategy.

Harrison CD, Nguyen TA, Seidel SB, Escobedo AM, Hartman C, Lam K, Liang KS, Martens M, Acker GN, Akana SF, Balukjian B, Benton HP, Blair JR, Boaz SM, Boyer KE, Bram JB, Burrus LW, Byrd DT, Caporale N, Carpenter EJ, Chan YM, Chen L, Chovnick A, Chu DS, Clarkson BK, Cooper SE, Creech CJ, de la Torre JR, Denetclaw WF, Duncan K, Edwards AS, Erickson K, Fuse M, Gorga JJ, Govindan B, Green LJ, Hankamp PZ, Harris HE, He ZH, Ingalls SB, Ingmire PD, Jacobs JR, Kamakea M, Kimpo RR, Knight JD, Krause SK, Krueger LE, Light TL, Lund L, Márquez-Magaña LM, McCarthy BK, McPheron L, Miller-Sims VC, Moffatt CA, Muick PC, Nagami PH, Nusse G, Okimura KM, Pasion SG, Patterson R, Pennings PS, Riggs B, Romeo JM, Roy SW, Russo-Tait T, Schultheis LM, Sengupta L, Spicer GS, Swei A, Wade JM, Willsie JK, Kelley LA, Owens MT, Trujillo G, Domingo C, Schinske JN, Tanner KD.

CBE Life Sci Educ. 2019 Sep;18(3):ar47. doi: 10.1187/cbe.18-10-0215.

4.

Levosimendan in patients with reduced left ventricular function undergoing isolated coronary or valve surgery.

van Diepen S, Mehta RH, Leimberger JD, Goodman SG, Fremes S, Jankowich R, Heringlake M, Anstrom KJ, Levy JH, Luber J, Nagpal AD, Duncan AE, Argenziano M, Toller W, Teoh K, Knight JD, Lopes RD, Cowper PA, Mark DB, Alexander JH.

J Thorac Cardiovasc Surg. 2019 Jun 21. pii: S0022-5223(19)31278-4. doi: 10.1016/j.jtcvs.2019.06.020. [Epub ahead of print]

PMID:
31358329
5.

Gene Information eXtension (GIX): effortless retrieval of gene product information on any website.

Knight JDR, Samavarchi-Tehrani P, Tyers M, Gingras AC.

Nat Methods. 2019 Aug;16(8):665-666. doi: 10.1038/s41592-019-0477-9. No abstract available.

PMID:
31217594
6.

Acute and 1-Year Hospitalization Costs for Acute Myocardial Infarction Treated With Percutaneous Coronary Intervention: Results From the TRANSLATE-ACS Registry.

Cowper PA, Knight JD, Davidson-Ray L, Peterson ED, Wang TY, Mark DB; TRANSLATE‐ACS Investigators.

J Am Heart Assoc. 2019 Apr 16;8(8):e011322. doi: 10.1161/JAHA.118.011322.

7.

Membrane-Binding Cooperativity and Coinsertion by C2AB Tandem Domains of Synaptotagmins 1 and 7.

Tran HT, Anderson LH, Knight JD.

Biophys J. 2019 Mar 19;116(6):1025-1036. doi: 10.1016/j.bpj.2019.01.035. Epub 2019 Feb 5.

PMID:
30795874
8.

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

Lambert JP, Picaud S, Fujisawa T, Hou H, Savitsky P, Uusküla-Reimand L, Gupta GD, Abdouni H, Lin ZY, Tucholska M, Knight JDR, Gonzalez-Badillo B, St-Denis N, Newman JA, Stucki M, Pelletier L, Bandeira N, Wilson MD, Filippakopoulos P, Gingras AC.

Mol Cell. 2019 Feb 7;73(3):621-638.e17. doi: 10.1016/j.molcel.2018.11.006. Epub 2018 Dec 13.

9.

Economic and Quality-of-Life Outcomes of Natriuretic Peptide-Guided Therapy for Heart Failure.

Mark DB, Cowper PA, Anstrom KJ, Sheng S, Daniels MR, Knight JD, Baloch KN, Davidson-Ray L, Fiuzat M, Januzzi JL Jr, Whellan DJ, Piña IL, Ezekowitz JA, Adams KF, Cooper LS, O'Connor CM, Felker GM.

J Am Coll Cardiol. 2018 Nov 27;72(21):2551-2562. doi: 10.1016/j.jacc.2018.08.2184.

PMID:
30466512
10.

A simple supported tubulated bilayer system for evaluating protein-mediated membrane remodeling.

Schenk NA, Dahl PJ, Hanna MG 4th, Audhya A, Tall GG, Knight JD, Anantharam A.

Chem Phys Lipids. 2018 Sep;215:18-28. doi: 10.1016/j.chemphyslip.2018.06.002. Epub 2018 Jul 22.

11.

Resolving the taxonomic enigma of the iconic game fish, the hump-backed mahseer from the Western Ghats biodiversity hotspot, India.

Pinder AC, Manimekalan A, Knight JDM, Krishnankutty P, Britton JR, Philip S, Dahanukar N, Raghavan R.

PLoS One. 2018 Jun 20;13(6):e0199328. doi: 10.1371/journal.pone.0199328. eCollection 2018.

12.

The high-affinity calcium sensor synaptotagmin-7 serves multiple roles in regulated exocytosis.

MacDougall DD, Lin Z, Chon NL, Jackman SL, Lin H, Knight JD, Anantharam A.

J Gen Physiol. 2018 Jun 4;150(6):783-807. doi: 10.1085/jgp.201711944. Epub 2018 May 24. Review.

13.

The synaptotagmin C2B domain calcium-binding loops modulate the rate of fusion pore expansion.

Bendahmane M, Bohannon KP, Bradberry MM, Rao TC, Schmidtke MW, Abbineni PS, Chon NL, Tran S, Lin H, Chapman ER, Knight JD, Anantharam A.

Mol Biol Cell. 2018 Feb 14;29(7):773-880. doi: 10.1091/mbc.E17-11-0623. [Epub ahead of print]

14.

High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies.

Youn JY, Dunham WH, Hong SJ, Knight JDR, Bashkurov M, Chen GI, Bagci H, Rathod B, MacLeod G, Eng SWM, Angers S, Morris Q, Fabian M, Côté JF, Gingras AC.

Mol Cell. 2018 Feb 1;69(3):517-532.e11. doi: 10.1016/j.molcel.2017.12.020. Epub 2018 Jan 25.

15.

Genotypic variation in the response of chickpea to arbuscular mycorrhizal fungi and non-mycorrhizal fungal endophytes.

Bazghaleh N, Hamel C, Gan Y, Tar'an B, Knight JD.

Can J Microbiol. 2018 Apr;64(4):265-275. doi: 10.1139/cjm-2017-0521. Epub 2018 Feb 1.

PMID:
29390194
16.

Collectively Improving Our Teaching: Attempting Biology Department-wide Professional Development in Scientific Teaching.

Owens MT, Trujillo G, Seidel SB, Harrison CD, Farrar KM, Benton HP, Blair JR, Boyer KE, Breckler JL, Burrus LW, Byrd DT, Caporale N, Carpenter EJ, Chan YM, Chen JC, Chen L, Chen LH, Chu DS, Cochlan WP, Crook RJ, Crow KD, de la Torre JR, Denetclaw WF, Dowdy LM, Franklin D, Fuse M, Goldman MA, Govindan B, Green M, Harris HE, He ZH, Ingalls SB, Ingmire P, Johnson ARB, Knight JD, LeBuhn G, Light TL, Low C, Lund L, Márquez-Magaña LM, Miller-Sims VC, Moffatt CA, Murdock H, Nusse GL, Parker VT, Pasion SG, Patterson R, Pennings PS, Ramirez JC, Ramirez RM, Riggs B, Rohlfs RV, Romeo JM, Rothman BS, Roy SW, Russo-Tait T, Sehgal RNM, Simonin KA, Spicer GS, Stillman JH, Swei A, Timpe LC, Vredenburg VT, Weinstein SL, Zink AG, Kelley LA, Domingo CR, Tanner KD.

CBE Life Sci Educ. 2018 Spring;17(1). pii: ar2. doi: 10.1187/cbe.17-06-0106. Erratum in: CBE Life Sci Educ. 2018 Spring;17 (1):.

17.

Lipid-Coated Gold Nanoparticles and FRET Allow Sensitive Monitoring of Liposome Clustering Mediated by the Synaptotagmin-7 C2A Domain.

Hamilton DJ, Coffman MD, Knight JD, Reed SM.

Langmuir. 2017 Sep 12;33(36):9222-9230. doi: 10.1021/acs.langmuir.7b01397. Epub 2017 Aug 29.

PMID:
28850236
18.

Investigating Novice and Expert Conceptions of Genetically Modified Organisms.

Potter LM, Bissonnette SA, Knight JD, Tanner KD.

CBE Life Sci Educ. 2017 Fall;16(3). pii: ar52. doi: 10.1187/cbe.16-11-0333.

19.

ProHits-viz: a suite of web tools for visualizing interaction proteomics data.

Knight JDR, Choi H, Gupta GD, Pelletier L, Raught B, Nesvizhskii AI, Gingras AC.

Nat Methods. 2017 Jun 29;14(7):645-646. doi: 10.1038/nmeth.4330. No abstract available.

20.

MOB1 Mediated Phospho-recognition in the Core Mammalian Hippo Pathway.

Couzens AL, Xiong S, Knight JDR, Mao DY, Guettler S, Picaud S, Kurinov I, Filippakopoulos P, Sicheri F, Gingras AC.

Mol Cell Proteomics. 2017 Jun;16(6):1098-1110. doi: 10.1074/mcp.M116.065490. Epub 2017 Apr 3.

21.

Classroom sound can be used to classify teaching practices in college science courses.

Owens MT, Seidel SB, Wong M, Bejines TE, Lietz S, Perez JR, Sit S, Subedar ZS, Acker GN, Akana SF, Balukjian B, Benton HP, Blair JR, Boaz SM, Boyer KE, Bram JB, Burrus LW, Byrd DT, Caporale N, Carpenter EJ, Chan YM, Chen L, Chovnick A, Chu DS, Clarkson BK, Cooper SE, Creech C, Crow KD, de la Torre JR, Denetclaw WF, Duncan KE, Edwards AS, Erickson KL, Fuse M, Gorga JJ, Govindan B, Green LJ, Hankamp PZ, Harris HE, He ZH, Ingalls S, Ingmire PD, Jacobs JR, Kamakea M, Kimpo RR, Knight JD, Krause SK, Krueger LE, Light TL, Lund L, Márquez-Magaña LM, McCarthy BK, McPheron LJ, Miller-Sims VC, Moffatt CA, Muick PC, Nagami PH, Nusse GL, Okimura KM, Pasion SG, Patterson R, Pennings PS, Riggs B, Romeo J, Roy SW, Russo-Tait T, Schultheis LM, Sengupta L, Small R, Spicer GS, Stillman JH, Swei A, Wade JM, Waters SB, Weinstein SL, Willsie JK, Wright DW, Harrison CD, Kelley LA, Trujillo G, Domingo CR, Schinske JN, Tanner KD.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3085-3090. doi: 10.1073/pnas.1618693114. Epub 2017 Mar 6.

22.

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

St-Denis N, Gupta GD, Lin ZY, Gonzalez-Badillo B, Veri AO, Knight JDR, Rajendran D, Couzens AL, Currie KW, Tkach JM, Cheung SWT, Pelletier L, Gingras AC.

Cell Rep. 2016 Nov 22;17(9):2488-2501. doi: 10.1016/j.celrep.2016.10.078.

23.

Hypselobarbus bicolor, a new species of large barb (Teleostei: Cyprinidae) from the Western Ghats of India.

Knight JD, Rai A, D'Souza RK, Philip S, Dahanukar N.

Zootaxa. 2016 Nov 3;4184(2):316-328. doi: 10.11646/zootaxa.4184.2.4.

PMID:
27811641
24.

Data Independent Acquisition analysis in ProHits 4.0.

Liu G, Knight JD, Zhang JP, Tsou CC, Wang J, Lambert JP, Larsen B, Tyers M, Raught B, Bandeira N, Nesvizhskii AI, Choi H, Gingras AC.

J Proteomics. 2016 Oct 21;149:64-68. doi: 10.1016/j.jprot.2016.04.042. Epub 2016 Apr 29.

25.

Discovery of a Noncovalent, Mutant-Selective Epidermal Growth Factor Receptor Inhibitor.

Chan BK, Hanan EJ, Bowman KK, Bryan MC, Burdick D, Chan E, Chen Y, Clausen S, Dela Vega T, Dotson J, Eigenbrot C, Elliott RL, Heald RA, Jackson PS, Knight JD, La H, Lainchbury MD, Malek S, Purkey HE, Schaefer G, Schmidt S, Seward EM, Sideris S, Shao L, Wang S, Yeap SK, Yen I, Yu C, Heffron TP.

J Med Chem. 2016 Oct 13;59(19):9080-9093. Epub 2016 Sep 12.

PMID:
27564586
26.

Health-related quality of life outcomes with prasugrel among medically managed non-ST-segment elevation acute coronary syndrome patients: Insights from the Targeted Platelet Inhibition to Clarify the Optimal Strategy to Medically Manage Acute Coronary Syndromes (TRILOGY ACS) trial.

Kaul P, Ohman EM, Knight JD, Anstrom KJ, Roe MT, Boden WE, Hochman JS, Gašparović V, Armstrong PW, McCollam P, Fakhouri W, Cowper P, Davidson-Ray L, Clapp-Channing N, White HD, Fox KA, Prabhakaran D, Mark DB; TRILOGY ACS Investigators.

Am Heart J. 2016 Aug;178:55-64. doi: 10.1016/j.ahj.2016.03.017. Epub 2016 Apr 16.

PMID:
27502852
27.

Economic Outcomes With Anatomical Versus Functional Diagnostic Testing for Coronary Artery Disease.

Mark DB, Federspiel JJ, Cowper PA, Anstrom KJ, Hoffmann U, Patel MR, Davidson-Ray L, Daniels MR, Cooper LS, Knight JD, Lee KL, Douglas PS; PROMISE Investigators.

Ann Intern Med. 2016 Jul 19;165(2):94-102. doi: 10.7326/M15-2639. Epub 2016 May 24.

28.

SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.

Teo G, Koh H, Fermin D, Lambert JP, Knight JD, Gingras AC, Choi H.

Proteomics. 2016 Aug;16(15-16):2238-45. doi: 10.1002/pmic.201500499. Epub 2016 May 27.

PMID:
27119218
29.

Mineralisation and degradation of 2,4-dichlorophenoxyacetic acid dimethylamine salt in a biobed matrix and in topsoil.

Knight JD, Cessna AJ, Ngombe D, Wolfe TM.

Pest Manag Sci. 2016 Oct;72(10):1965-76. doi: 10.1002/ps.4238. Epub 2016 Feb 29.

PMID:
26818964
30.

How Reliable are Patient-Reported Rehospitalizations? Implications for the Design of Future Practical Clinical Studies.

Krishnamoorthy A, Peterson ED, Knight JD, Anstrom KJ, Effron MB, Zettler ME, Davidson-Ray L, Baker BA, McCollam PL, Mark DB, Wang TY.

J Am Heart Assoc. 2016 Jan 25;5(1). pii: e002695. doi: 10.1161/JAHA.115.002695.

31.

Heart of glass anchors Rasip1 at endothelial cell-cell junctions to support vascular integrity.

de Kreuk BJ, Gingras AR, Knight JD, Liu JJ, Gingras AC, Ginsberg MH.

Elife. 2016 Jan 19;5:e11394. doi: 10.7554/eLife.11394.

32.

A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface.

Gupta GD, Coyaud É, Gonçalves J, Mojarad BA, Liu Y, Wu Q, Gheiratmand L, Comartin D, Tkach JM, Cheung SW, Bashkurov M, Hasegan M, Knight JD, Lin ZY, Schueler M, Hildebrandt F, Moffat J, Gingras AC, Raught B, Pelletier L.

Cell. 2015 Dec 3;163(6):1484-99. doi: 10.1016/j.cell.2015.10.065.

33.

Description of two new species of Laubuka (Teleostei: Cyprinidae) from River Cauvery, southern Iandia.

Knight JD.

Zootaxa. 2015 Aug 19;4000(5):518-30. doi: 10.11646/zootaxa.4000.5.2.

PMID:
26623743
34.

MSPLIT-DIA: sensitive peptide identification for data-independent acquisition.

Wang J, Tucholska M, Knight JD, Lambert JP, Tate S, Larsen B, Gingras AC, Bandeira N.

Nat Methods. 2015 Dec;12(12):1106-8. doi: 10.1038/nmeth.3655. No abstract available.

35.

Membrane Docking of the Synaptotagmin 7 C2A Domain: Computation Reveals Interplay between Electrostatic and Hydrophobic Contributions.

Chon NL, Osterberg JR, Henderson J, Khan HM, Reuter N, Knight JD, Lin H.

Biochemistry. 2015 Sep 22;54(37):5696-711. doi: 10.1021/acs.biochem.5b00422. Epub 2015 Sep 10.

PMID:
26333120
36.

Membrane Docking of the Synaptotagmin 7 C2A Domain: Electron Paramagnetic Resonance Measurements Show Contributions from Two Membrane Binding Loops.

Osterberg JR, Chon NL, Boo A, Maynard FA, Lin H, Knight JD.

Biochemistry. 2015 Sep 22;54(37):5684-95. doi: 10.1021/acs.biochem.5b00421. Epub 2015 Sep 10.

37.

Barilius ardens (Teleostei: Cyprinidae), a new species from the Western Ghats, India, with redescription of B. malabaricus and B. canarensis.

Knight JD, Rai A, D'Souza RK, Vijaykrishnan B.

Zootaxa. 2015 Mar 6;3926(3):396-412. doi: 10.11646/zootaxa.3926.3.5.

PMID:
25781791
38.

CCM-3/STRIPAK promotes seamless tube extension through endocytic recycling.

Lant B, Yu B, Goudreault M, Holmyard D, Knight JD, Xu P, Zhao L, Chin K, Wallace E, Zhen M, Gingras AC, Derry WB.

Nat Commun. 2015 Mar 6;6:6449. doi: 10.1038/ncomms7449.

PMID:
25743393
39.

A review of the species of Oreichthys (Teleostei: Cyprinidae) in the Western Ghats, India.

Knight JD, Kumar RG.

Zootaxa. 2015 Jan 27;3914(2):157-67. doi: 10.11646/zootaxa.3914.2.5. Review.

PMID:
25661937
40.

Genotype-specific variation in the structure of root fungal communities is related to chickpea plant productivity.

Bazghaleh N, Hamel C, Gan Y, Tar'an B, Knight JD.

Appl Environ Microbiol. 2015 Apr;81(7):2368-77. doi: 10.1128/AEM.03692-14. Epub 2015 Jan 23.

41.

Lateral diffusion of proteins on supported lipid bilayers: additive friction of synaptotagmin 7 C2A-C2B tandem domains.

Vasquez JK, Chantranuvatana K, Giardina DT, Coffman MD, Knight JD.

Biochemistry. 2014 Dec 23;53(50):7904-13. doi: 10.1021/bi5012223. Epub 2014 Dec 15.

42.

A web-tool for visualizing quantitative protein-protein interaction data.

Knight JD, Liu G, Zhang JP, Pasculescu A, Choi H, Gingras AC.

Proteomics. 2015 Apr;15(8):1432-6. doi: 10.1002/pmic.201400429. Epub 2015 Jan 19.

PMID:
25422071
43.

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

Lambert JP, Tucholska M, Go C, Knight JD, Gingras AC.

J Proteomics. 2015 Apr 6;118:81-94. doi: 10.1016/j.jprot.2014.09.011. Epub 2014 Oct 2.

44.

Quality-of-life outcomes with coronary artery bypass graft surgery in ischemic left ventricular dysfunction: a randomized trial.

Mark DB, Knight JD, Velazquez EJ, Wasilewski J, Howlett JG, Smith PK, Spertus JA, Rajda M, Yadav R, Hamman BL, Malinowski M, Naik A, Rankin G, Harding TM, Drew LA, Desvigne-Nickens P, Anstrom KJ.

Ann Intern Med. 2014 Sep 16;161(6):392-9. doi: 10.7326/M13-1380.

45.

Pethia rutila (Teleostei: Cyprinidae), a new species from Mizoram, Northeast India.

Lalramliana, Knight JD, Laltlanhlua Z.

Zootaxa. 2014 Jul 4;3827(3):366-74. doi: 10.11646/zootaxa.3827.3.6.

PMID:
25081166
46.

A further note on the identity of Barbus mussullah Sykes (Teleostei: Cyprinidae)  .

Knight JD, Rai A, D'souza RK.

Zootaxa. 2014 Jun 20;3821(2):280-4. doi: 10.11646/zootaxa.3821.2.8.

PMID:
24989742
47.

Quality-of-life outcomes with a disodium EDTA chelation regimen for coronary disease: results from the trial to assess chelation therapy randomized trial.

Mark DB, Anstrom KJ, Clapp-Channing NE, Knight JD, Boineau R, Goertz C, Rozema TC, Liu DM, Nahin RL, Rosenberg Y, Drisko J, Lee KL, Lamas GA; TACT Investigators.

Circ Cardiovasc Qual Outcomes. 2014 Jul;7(4):508-16.

48.

Stereoselective synthesis of quaternary carbons via the dianionic Ireland-Claisen rearrangement.

Crimmins MT, Knight JD, Williams PS, Zhang Y.

Org Lett. 2014 May 2;16(9):2458-61. doi: 10.1021/ol5008422. Epub 2014 Apr 15.

49.

Single-molecule studies reveal a hidden key step in the activation mechanism of membrane-bound protein kinase C-α.

Ziemba BP, Li J, Landgraf KE, Knight JD, Voth GA, Falke JJ.

Biochemistry. 2014 Mar 18;53(10):1697-713. doi: 10.1021/bi4016082. Epub 2014 Mar 7.

50.

An unbiased proteomic screen reveals caspase cleavage is positively and negatively regulated by substrate phosphorylation.

Turowec JP, Zukowski SA, Knight JD, Smalley DM, Graves LM, Johnson GL, Li SS, Lajoie GA, Litchfield DW.

Mol Cell Proteomics. 2014 May;13(5):1184-97. doi: 10.1074/mcp.M113.037374. Epub 2014 Feb 20.

Supplemental Content

Loading ...
Support Center