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Items: 1 to 50 of 77

1.

Complete Genome Sequences of Brenneria rubrifaciens Strain 6D370 and Brenneria nigrifluens Strain ATCC 13028, Causative Agents of Bark Cankers in Walnut.

Poret-Peterson AT, McClean AE, Chen L, Kluepfel DA.

Microbiol Resour Announc. 2019 Sep 12;8(37). pii: e00597-19. doi: 10.1128/MRA.00597-19.

2.

Sequencing a Juglans regia × J. microcarpa hybrid yields high-quality genome assemblies of parental species.

Zhu T, Wang L, You FM, Rodriguez JC, Deal KR, Chen L, Li J, Chakraborty S, Balan B, Jiang CZ, Brown PJ, Leslie CA, Aradhya MK, Dandekar AM, McGuire PE, Kluepfel D, Dvorak J, Luo MC.

Hortic Res. 2019 Mar 25;6:55. doi: 10.1038/s41438-019-0139-1. eCollection 2019.

3.

Variations in xylem embolism susceptibility under drought between intact saplings of three walnut species.

Knipfer T, Barrios-Masias FH, Cuneo IF, Bouda M, Albuquerque CP, Brodersen CR, Kluepfel DA, McElrone AJ.

Tree Physiol. 2018 Aug 1;38(8):1180-1192. doi: 10.1093/treephys/tpy049.

PMID:
29850910
4.

Genomic Variation Among and Within Six Juglans Species.

Stevens KA, Woeste K, Chakraborty S, Crepeau MW, Leslie CA, Martínez-García PJ, Puiu D, Romero-Severson J, Coggeshall M, Dandekar AM, Kluepfel D, Neale DB, Salzberg SL, Langley CH.

G3 (Bethesda). 2018 Jul 2;8(7):2153-2165. doi: 10.1534/g3.118.200030.

5.

Draft Genome Sequence of Agrobacterium tumefaciens Biovar 1 Strain 186, Isolated from Walnut.

Poret-Peterson AT, Bhatnagar S, McClean AE, Kluepfel DA.

Genome Announc. 2017 Nov 16;5(46). pii: e01232-17. doi: 10.1128/genomeA.01232-17.

6.

Patterns of drought-induced embolism formation and spread in living walnut saplings visualized using X-ray microtomography.

Knipfer T, Brodersen CR, Zedan A, Kluepfel DA, McElrone AJ.

Tree Physiol. 2015 Jul;35(7):744-55. doi: 10.1093/treephys/tpv040. Epub 2015 Jun 9.

PMID:
26063708
7.

Incidence of Agrobacterium tumefaciens Biovar 1 in and on 'Paradox' (Juglans hindsii × Juglans regia) Walnut Seed Collected from Commercial Nurseries.

Yakabe LE, Parker SR, Kluepfel DA.

Plant Dis. 2014 Jun;98(6):766-770. doi: 10.1094/PDIS-07-13-0742-RE.

PMID:
30708636
8.

Role of Systemic Agrobacterium tumefaciens Populations in Crown Gall Incidence on the Walnut Hybrid Rootstock 'Paradox'.

Yakabe LE, Parker SR, Kluepfel DA.

Plant Dis. 2012 Oct;96(10):1415-1421. doi: 10.1094/PDIS-05-11-0364-RE.

PMID:
30727339
9.

Soil Solarization and Biological Control for Managing Mesocriconema xenoplax and Short Life in a Newly Established Peach Orchard.

Nyczepir AP, Kluepfel DA, Waldrop V, Wechter WP.

Plant Dis. 2012 Sep;96(9):1309-1314. doi: 10.1094/PDIS-05-11-0373-RE.

PMID:
30727154
10.

Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.

Loper JE, Hassan KA, Mavrodi DV, Davis EW 2nd, Lim CK, Shaffer BT, Elbourne LD, Stockwell VO, Hartney SL, Breakwell K, Henkels MD, Tetu SG, Rangel LI, Kidarsa TA, Wilson NL, van de Mortel JE, Song C, Blumhagen R, Radune D, Hostetler JB, Brinkac LM, Durkin AS, Kluepfel DA, Wechter WP, Anderson AJ, Kim YC, Pierson LS 3rd, Pierson EA, Lindow SE, Kobayashi DY, Raaijmakers JM, Weller DM, Thomashow LS, Allen AE, Paulsen IT.

PLoS Genet. 2012 Jul;8(7):e1002784. doi: 10.1371/journal.pgen.1002784. Epub 2012 Jul 5.

11.

Cationic Surfactants: Potential Surface Disinfectants to Manage Agrobacterium tumefaciens Biovar 1 Contamination of Grafting Tools.

Yakabe LE, Parker SR, Kluepfel DA.

Plant Dis. 2012 Mar;96(3):409-415. doi: 10.1094/PDIS-11-10-0839.

PMID:
30727138
12.

AHL signals induce rubrifacine production in a bruI mutant of Brenneria rubrifaciens.

McClean AE, Duerkop BA, Greenberg EP, Kluepfel DA.

Phytopathology. 2012 Feb;102(2):195-203. doi: 10.1094/PHYTO-04-11-0111.

13.

The role of tyloses in crown hydraulic failure of mature walnut trees afflicted by apoplexy disorder.

McElrone AJ, Grant JA, Kluepfel DA.

Tree Physiol. 2010 Jun;30(6):761-72. doi: 10.1093/treephys/tpq026. Epub 2010 May 6.

PMID:
20447983
14.

Genetic loci involved in rubrifacine production in the walnut pathogen Brenneria rubrifaciens.

McClean AE, Kluepfel DA.

Phytopathology. 2009 Feb;99(2):145-51. doi: 10.1094/PHYTO-99-2-0145.

15.

Insect-Mediated Dispersal of the Rhizobacterium Pseudomonas chlororaphis.

Snyder WE, Tonkyn DW, Kluepfel DA.

Phytopathology. 1998 Dec;88(12):1248-54. doi: 10.1094/PHYTO.1998.88.12.1248.

16.

Relationship between avirulence gene (avrA) diversity in Ralstonia solanacearum and bacterial wilt incidence.

Robertson AE, Wechter WP, Denny TP, Fortnum BA, Kluepfel DA.

Mol Plant Microbe Interact. 2004 Dec;17(12):1376-84.

17.
18.

Biological control of the phytoparasitic nematode Mesocriconema xenoplax on peach trees.

Kluepfel DA, Nyczepir AP, Lawrence JE, Wechter WP, Leverentz B.

J Nematol. 2002 Jun;34(2):120-3.

19.

Physical mapping, BAC-end sequence analysis, and marker tagging of the soilborne nematicidal bacterium, Pseudomonas synxantha BG33R.

Wechter WP, Begum D, Presting G, Kim JJ, Wing RA, Kluepfel DA.

OMICS. 2002;6(1):11-21.

PMID:
11881828
20.

Development of an Escherichia coli expression system and thermostability screening assay for libraries of mutant xylanase.

Ebanks R, Dupont M, Shareck F, Morosoli R, Kluepfel D, Dupont C.

J Ind Microbiol Biotechnol. 2000 Dec;25(6):310-314.

PMID:
11320418
21.

Substrate specificity in glycoside hydrolase family 10. Structural and kinetic analysis of the Streptomyces lividans xylanase 10A.

Ducros V, Charnock SJ, Derewenda U, Derewenda ZS, Dauter Z, Dupont C, Shareck F, Morosoli R, Kluepfel D, Davies GJ.

J Biol Chem. 2000 Jul 28;275(30):23020-6.

22.

Characterization of active-site aromatic residues in xylanase A from Streptomyces lividans.

Roberge M, Shareck F, Morosoli R, Kluepfel D, Dupont C.

Protein Eng. 1999 Mar;12(3):251-7.

PMID:
10235626
23.

Site-directed mutagenesis study of a conserved residue in family 10 glycanases: histidine 86 of xylanase A from Streptomyces lividans.

Roberge M, Shareck F, Morosoli R, Kluepfel D, Dupont C.

Protein Eng. 1998 May;11(5):399-404.

PMID:
9681873
24.

Substrate-binding domains of glycanases from Streptomyces lividans: characterization of a new family of xylan-binding domains.

Dupont C, Roberge M, Shareck F, Morosoli R, Kluepfel D.

Biochem J. 1998 Feb 15;330 ( Pt 1):41-5.

25.

Endo-beta-1,4-xylanase families: differences in catalytic properties.

Biely P, Vrsanská M, Tenkanen M, Kluepfel D.

J Biotechnol. 1997 Sep 16;57(1-3):151-66.

PMID:
9335171
26.

Characterization of two important histidine residues in the active site of xylanase A from Streptomyces lividans, a family 10 glycanase.

Roberge M, Shareck F, Morosoli R, Kluepfel D, Dupont C.

Biochemistry. 1997 Jun 24;36(25):7769-75.

PMID:
9201919
28.
29.

Protein secretion in streptomycetes.

Morosoli R, Shareck F, Kluepfel D.

FEMS Microbiol Lett. 1997 Jan 15;146(2):167-74. Review.

30.

Improved Production of Mannanase by Streptomyces lividans.

Marga F, Ghakis C, Dupont C, Morosoli R, Kluepfel D.

Appl Environ Microbiol. 1996 Dec;62(12):4656-8.

31.

Substrate specificity and mode of action of acetylxylan esterase from Streptomyces lividans.

Biely P, Côté GL, Kremnický L, Greene RV, Dupont C, Kluepfel D.

FEBS Lett. 1996 Nov 4;396(2-3):257-60.

32.

Purification and characterization of an acetyl xylan esterase produced by Streptomyces lividans.

Dupont C, Daigneault N, Shareck F, Morosoli R, Kluepfel D.

Biochem J. 1996 Nov 1;319 ( Pt 3):881-6.

33.

Cloning and sequencing of the secY homolog from Streptomyces lividans 1326.

Ostiguy S, Gilbert M, Shareck F, Kluepfel D, Morosoli R.

Gene. 1996 Oct 17;176(1-2):265-7.

PMID:
8918265
34.

Cloning of a secA homolog from Streptomyces lividans 1326 and overexpression in both S. lividans and Escherichia coli.

Gilbert M, Ostiguy S, Kluepfel D, Morosoli R.

Biochim Biophys Acta. 1996 Aug 15;1296(1):9-12. Erratum in: Biochim Biophys Acta 1997 Mar 7;1338(1):146.

PMID:
8765222
35.

Increased xylanase yield in Streptomyces lividans: dependence on number of ribosome-binding sites.

Pagé N, Kluepfel D, Shareck F, Morosoli R.

Nat Biotechnol. 1996 Jun;14(6):756-9.

PMID:
9630985
36.

Expression and secretion of beta-glucuronidase and Pertussis toxin S1 by Streptomyces lividans.

Paradis FW, Shareck F, Dupont C, Kluepfel D, Morosoli R.

Appl Microbiol Biotechnol. 1996 Jun;45(5):646-51.

PMID:
8766700
37.

Evidence for lysozyme-type mechanism of hydrolysis in xylanases.

Dupont C, Kluepfel D, Morosoli R.

EXS. 1996;75:411-23. Review.

PMID:
8765310
38.

Effect of signal peptide alterations and replacement on export of xylanase A in Streptomyces lividans.

Pagé N, Kluepfel D, Shareck F, Morosoli R.

Appl Environ Microbiol. 1996 Jan;62(1):109-14.

41.

Production and secretion of proteins by streptomycetes.

Gilbert M, Morosoli R, Shareck F, Kluepfel D.

Crit Rev Biotechnol. 1995;15(1):13-39. Review.

PMID:
7736599
42.
43.

Crystal structure, at 2.6-A resolution, of the Streptomyces lividans xylanase A, a member of the F family of beta-1,4-D-glycanases.

Derewenda U, Swenson L, Green R, Wei Y, Morosoli R, Shareck F, Kluepfel D, Derewenda ZS.

J Biol Chem. 1994 Aug 19;269(33):20811-4.

44.

Identification of two acidic residues involved in the catalysis of xylanase A from Streptomyces lividans.

Moreau A, Roberge M, Manin C, Shareck F, Kluepfel D, Morosoli R.

Biochem J. 1994 Aug 15;302 ( Pt 1):291-5.

45.

Effects of disruption of xylanase-encoding genes on the xylanolytic system of Streptomyces lividans.

Arhin FF, Shareck F, Kluepfel D, Morosoli R.

J Bacteriol. 1994 Aug;176(16):4924-30.

46.

Purification and characterization of the CelB endoglucanase from Streptomyces lividans 66 and DNA sequence of the encoding gene.

Wittmann S, Shareck F, Kluepfel D, Morosoli R.

Appl Environ Microbiol. 1994 May;60(5):1701-3.

47.

Increase in catalytic activity and thermostability of the xylanase A of Streptomyces lividans 1326 by site-specific mutagenesis.

Moreau A, Shareck F, Kluepfel D, Morosoli R.

Enzyme Microb Technol. 1994 May;16(5):420-4.

PMID:
7764794
49.

Mode of action of three endo-beta-1,4-xylanases of Streptomyces lividans.

Biely P, Kluepfel D, Morosoli R, Shareck F.

Biochim Biophys Acta. 1993 Mar 26;1162(3):246-54.

PMID:
8457588
50.

Beta-mannanase of Streptomyces lividans 66: cloning and DNA sequence of the manA gene and characterization of the enzyme.

Arcand N, Kluepfel D, Paradis FW, Morosoli R, Shareck F.

Biochem J. 1993 Mar 15;290 ( Pt 3):857-63.

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