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Items: 14

1.

Nucleosome Positioning by an Evolutionarily Conserved Chromatin Remodeler Prevents Aberrant DNA Methylation in Neurospora.

Klocko AD, Uesaka M, Ormsby T, Rountree MR, Wiles ET, Adhvaryu KK, Honda S, Selker EU.

Genetics. 2019 Feb;211(2):563-578. doi: 10.1534/genetics.118.301711. Epub 2018 Dec 15.

PMID:
30554169
2.

Reply to Hogan: Direct evidence of RNA-protein interactions and rewiring.

Wilinski D, Buter N, Klocko AD, Lapointe CP, Selker EU, Gasch AP, Wickens M.

Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):E10854-E10855. doi: 10.1073/pnas.1717585114. Epub 2017 Dec 5. No abstract available.

3.

Recurrent rewiring and emergence of RNA regulatory networks.

Wilinski D, Buter N, Klocko AD, Lapointe CP, Selker EU, Gasch AP, Wickens M.

Proc Natl Acad Sci U S A. 2017 Apr 4;114(14):E2816-E2825. doi: 10.1073/pnas.1617777114. Epub 2017 Mar 20.

4.

Normal chromosome conformation depends on subtelomeric facultative heterochromatin in Neurospora crassa.

Klocko AD, Ormsby T, Galazka JM, Leggett NA, Uesaka M, Honda S, Freitag M, Selker EU.

Proc Natl Acad Sci U S A. 2016 Dec 27;113(52):15048-15053. doi: 10.1073/pnas.1615546113. Epub 2016 Nov 16.

5.

Neurospora chromosomes are organized by blocks of importin alpha-dependent heterochromatin that are largely independent of H3K9me3.

Galazka JM, Klocko AD, Uesaka M, Honda S, Selker EU, Freitag M.

Genome Res. 2016 Aug;26(8):1069-80. doi: 10.1101/gr.203182.115. Epub 2016 Jun 3.

6.

Neurospora importin α is required for normal heterochromatic formation and DNA methylation.

Klocko AD, Rountree MR, Grisafi PL, Hays SM, Adhvaryu KK, Selker EU.

PLoS Genet. 2015 Mar 20;11(3):e1005083. doi: 10.1371/journal.pgen.1005083. eCollection 2015 Mar.

7.

Mismatch repair causes the dynamic release of an essential DNA polymerase from the replication fork.

Klocko AD, Schroeder JW, Walsh BW, Lenhart JS, Evans ML, Simmons LA.

Mol Microbiol. 2011 Nov;82(3):648-63. doi: 10.1111/j.1365-2958.2011.07841.x. Epub 2011 Sep 30.

8.

Structure of the endonuclease domain of MutL: unlicensed to cut.

Pillon MC, Lorenowicz JJ, Uckelmann M, Klocko AD, Mitchell RR, Chung YS, Modrich P, Walker GC, Simmons LA, Friedhoff P, Guarné A.

Mol Cell. 2010 Jul 9;39(1):145-51. doi: 10.1016/j.molcel.2010.06.027.

9.

Mutations in the Bacillus subtilis beta clamp that separate its roles in DNA replication from mismatch repair.

Dupes NM, Walsh BW, Klocko AD, Lenhart JS, Peterson HL, Gessert DA, Pavlick CE, Simmons LA.

J Bacteriol. 2010 Jul;192(13):3452-63. doi: 10.1128/JB.01435-09. Epub 2010 May 7.

10.

Imaging mismatch repair and cellular responses to DNA damage in Bacillus subtilis.

Klocko AD, Crafton KM, Walsh BW, Lenhart JS, Simmons LA.

J Vis Exp. 2010 Feb 8;(36). pii: 1736. doi: 10.3791/1736.

11.

6S RNA binding to Esigma(70) requires a positively charged surface of sigma(70) region 4.2.

Klocko AD, Wassarman KM.

Mol Microbiol. 2009 Jul;73(2):152-64. doi: 10.1111/j.1365-2958.2009.06758.x. Epub 2009 Jun 16.

12.

Promoter specificity for 6S RNA regulation of transcription is determined by core promoter sequences and competition for region 4.2 of sigma70.

Cavanagh AT, Klocko AD, Liu X, Wassarman KM.

Mol Microbiol. 2008 Mar;67(6):1242-56. doi: 10.1111/j.1365-2958.2008.06117.x. Epub 2008 Jan 15.

13.

Ectopic expression of a cecropin transgene in the human malaria vector mosquito Anopheles gambiae (Diptera: Culicidae): effects on susceptibility to Plasmodium.

Kim W, Koo H, Richman AM, Seeley D, Vizioli J, Klocko AD, O'Brochta DA.

J Med Entomol. 2004 May;41(3):447-55.

PMID:
15185949
14.

Post-integration behavior of a Mos1 mariner gene vector in Aedes aegypti.

Wilson R, Orsetti J, Klocko AD, Aluvihare C, Peckham E, Atkinson PW, Lehane MJ, O'Brochta DA.

Insect Biochem Mol Biol. 2003 Sep;33(9):853-63.

PMID:
12915177

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