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Tissue classification in intercostal and paravertebral ultrasound using spectral analysis of radiofrequency backscatter.

Klingensmith JD, Haggard AL, Ralston JT, Qiang B, Fedewa RJ, Elsharkawy H, Geoffrey Vince D.

J Med Imaging (Bellingham). 2019 Oct;6(4):047001. doi: 10.1117/1.JMI.6.4.047001. Epub 2019 Nov 7.


Advance care planning with patients on hemodialysis: an implementation study.

Goff SL, Unruh ML, Klingensmith J, Eneanya ND, Garvey C, Germain MJ, Cohen LM.

BMC Palliat Care. 2019 Jul 26;18(1):64. doi: 10.1186/s12904-019-0437-2.


Development and evaluation of a method for segmentation of cardiac, subcutaneous, and visceral adipose tissue from Dixon magnetic resonance images.

Klingensmith JD, Elliott AL, Givan AH, Faszold ZD, Mahan CL, Doedtman AM, Fernandez-Del-Valle M.

J Med Imaging (Bellingham). 2019 Jan;6(1):014004. doi: 10.1117/1.JMI.6.1.014004. Epub 2019 Feb 7.


Spectral Analysis of Ultrasound Radiofrequency Backscatter for the Detection of Intercostal Blood Vessels.

Klingensmith JD, Haggard A, Fedewa RJ, Qiang B, Cummings K 3rd, DeGrande S, Vince DG, Elsharkawy H.

Ultrasound Med Biol. 2018 Jul;44(7):1411-1422. doi: 10.1016/j.ultrasmedbio.2018.03.007. Epub 2018 Apr 19.


Effects of resistance training on MRI-derived epicardial fat volume and arterial stiffness in women with obesity: a randomized pilot study.

Fernandez-del-Valle M, Gonzales JU, Kloiber S, Mitra S, Klingensmith J, Larumbe-Zabala E.

Eur J Appl Physiol. 2018 Jun;118(6):1231-1240. doi: 10.1007/s00421-018-3852-9. Epub 2018 Mar 27.


Shared decision-making in end-stage renal disease: a protocol for a multi-center study of a communication intervention to improve end-of-life care for dialysis patients.

Eneanya ND, Goff SL, Martinez T, Gutierrez N, Klingensmith J, Griffith JL, Garvey C, Kitsen J, Germain MJ, Marr L, Berzoff J, Unruh M, Cohen LM.

BMC Palliat Care. 2015 Jun 12;14:30. doi: 10.1186/s12904-015-0027-x.


One shall become two: Separation of the esophagus and trachea from the common foregut tube.

Billmyre KK, Hutson M, Klingensmith J.

Dev Dyn. 2015 Mar;244(3):277-88. doi: 10.1002/dvdy.24219. Epub 2014 Dec 2. Review.


Multiple tissue-specific requirements for the BMP antagonist Noggin in development of the mammalian craniofacial skeleton.

Matsui M, Klingensmith J.

Dev Biol. 2014 Aug 15;392(2):168-81. doi: 10.1016/j.ydbio.2014.06.006. Epub 2014 Jun 17.


BMP antagonism by Noggin is required in presumptive notochord cells for mammalian foregut morphogenesis.

Fausett SR, Brunet LJ, Klingensmith J.

Dev Biol. 2014 Jul 1;391(1):111-24. doi: 10.1016/j.ydbio.2014.02.008. Epub 2014 Mar 12.


Compartmentalization of the foregut tube: developmental origins of the trachea and esophagus.

Fausett SR, Klingensmith J.

Wiley Interdiscip Rev Dev Biol. 2012 Mar-Apr;1(2):184-202. doi: 10.1002/wdev.12. Epub 2011 Nov 21. Review.


RNA-binding protein FXR2 regulates adult hippocampal neurogenesis by reducing Noggin expression.

Guo W, Zhang L, Christopher DM, Teng ZQ, Fausett SR, Liu C, George OL, Klingensmith J, Jin P, Zhao X.

Neuron. 2011 Jun 9;70(5):924-38. doi: 10.1016/j.neuron.2011.03.027.


The actin nucleator Cordon-bleu is required for development of motile cilia in zebrafish.

Ravanelli AM, Klingensmith J.

Dev Biol. 2011 Feb 1;350(1):101-11. doi: 10.1016/j.ydbio.2010.11.023. Epub 2010 Dec 1.


Modulation of BMP signaling by Noggin is required for the maintenance of palatal epithelial integrity during palatogenesis.

He F, Xiong W, Wang Y, Matsui M, Yu X, Chai Y, Klingensmith J, Chen Y.

Dev Biol. 2010 Nov 1;347(1):109-21. doi: 10.1016/j.ydbio.2010.08.014. Epub 2010 Aug 19.


BMP antagonism protects Nodal signaling in the gastrula to promote the tissue interactions underlying mammalian forebrain and craniofacial patterning.

Yang YP, Anderson RM, Klingensmith J.

Hum Mol Genet. 2010 Aug 1;19(15):3030-42. doi: 10.1093/hmg/ddq208. Epub 2010 May 27.


Roles of bone morphogenetic protein signaling and its antagonism in holoprosencephaly.

Klingensmith J, Matsui M, Yang YP, Anderson RM.

Am J Med Genet C Semin Med Genet. 2010 Feb 15;154C(1):43-51. doi: 10.1002/ajmg.c.30256. Review.


Bone morphogenetic protein 4 mediates myocardial ischemic injury through JNK-dependent signaling pathway.

Pachori AS, Custer L, Hansen D, Clapp S, Kemppa E, Klingensmith J.

J Mol Cell Cardiol. 2010 Jun;48(6):1255-65. doi: 10.1016/j.yjmcc.2010.01.010. Epub 2010 Jan 20.


Chordin is a modifier of tbx1 for the craniofacial malformations of 22q11 deletion syndrome phenotypes in mouse.

Choi M, Klingensmith J.

PLoS Genet. 2009 Feb;5(2):e1000395. doi: 10.1371/journal.pgen.1000395. Epub 2009 Feb 27.


An FGF autocrine loop initiated in second heart field mesoderm regulates morphogenesis at the arterial pole of the heart.

Park EJ, Watanabe Y, Smyth G, Miyagawa-Tomita S, Meyers E, Klingensmith J, Camenisch T, Buckingham M, Moon AM.

Development. 2008 Nov;135(21):3599-610. doi: 10.1242/dev.025437. Epub 2008 Oct 2.


BMP antagonism is required in both the node and lateral plate mesoderm for mammalian left-right axis establishment.

Mine N, Anderson RM, Klingensmith J.

Development. 2008 Aug;135(14):2425-34. doi: 10.1242/dev.018986. Epub 2008 Jun 11.


Intracardiac septation requires hedgehog-dependent cellular contributions from outside the heart.

Goddeeris MM, Rho S, Petiet A, Davenport CL, Johnson GA, Meyers EN, Klingensmith J.

Development. 2008 May;135(10):1887-95. doi: 10.1242/dev.016147.


Cordon-bleu is an actin nucleation factor and controls neuronal morphology.

Ahuja R, Pinyol R, Reichenbach N, Custer L, Klingensmith J, Kessels MM, Qualmann B.

Cell. 2007 Oct 19;131(2):337-50.


Neural plate morphogenesis during mouse neurulation is regulated by antagonism of Bmp signalling.

Ybot-Gonzalez P, Gaston-Massuet C, Girdler G, Klingensmith J, Arkell R, Greene ND, Copp AJ.

Development. 2007 Sep;134(17):3203-11.


Independent requirements for Hedgehog signaling by both the anterior heart field and neural crest cells for outflow tract development.

Goddeeris MM, Schwartz R, Klingensmith J, Meyers EN.

Development. 2007 Apr;134(8):1593-604. Epub 2007 Mar 7.


The bone morphogenetic protein antagonist noggin regulates mammalian cardiac morphogenesis.

Choi M, Stottmann RW, Yang YP, Meyers EN, Klingensmith J.

Circ Res. 2007 Feb 2;100(2):220-8. Epub 2007 Jan 11.


BMP signaling in the epiblast is required for proper recruitment of the prospective paraxial mesoderm and development of the somites.

Miura S, Davis S, Klingensmith J, Mishina Y.

Development. 2006 Oct;133(19):3767-75. Epub 2006 Aug 30.


Morphogenesis of the trachea and esophagus: current players and new roles for noggin and Bmps.

Que J, Choi M, Ziel JW, Klingensmith J, Hogan BL.

Differentiation. 2006 Sep;74(7):422-37. Review.


Endogenous bone morphogenetic protein antagonists regulate mammalian neural crest generation and survival.

Anderson RM, Stottmann RW, Choi M, Klingensmith J.

Dev Dyn. 2006 Sep;235(9):2507-20.


Roles of organizer factors and BMP antagonism in mammalian forebrain establishment.

Yang YP, Klingensmith J.

Dev Biol. 2006 Aug 15;296(2):458-75. Epub 2006 Jun 14.


Fgf8 is required for anterior heart field development.

Ilagan R, Abu-Issa R, Brown D, Yang YP, Jiao K, Schwartz RJ, Klingensmith J, Meyers EN.

Development. 2006 Jun;133(12):2435-45.


The BMP antagonist Noggin promotes cranial and spinal neurulation by distinct mechanisms.

Stottmann RW, Berrong M, Matta K, Choi M, Klingensmith J.

Dev Biol. 2006 Jul 15;295(2):647-63. Epub 2006 Apr 7.


Sonic hedgehog is required for cardiac outflow tract and neural crest cell development.

Washington Smoak I, Byrd NA, Abu-Issa R, Goddeeris MM, Anderson R, Morris J, Yamamura K, Klingensmith J, Meyers EN.

Dev Biol. 2005 Jul 15;283(2):357-72.


Real-time plaque characterization and visualization with spectral analysis of intravascular ultrasound data.

Nair A, Klingensmith JD, Vince DG.

Stud Health Technol Inform. 2005;113:300-20.


BMP receptor IA is required in the mammalian embryo for endodermal morphogenesis and ectodermal patterning.

Davis S, Miura S, Hill C, Mishina Y, Klingensmith J.

Dev Biol. 2004 Jun 1;270(1):47-63.


BMP receptor IA is required in mammalian neural crest cells for development of the cardiac outflow tract and ventricular myocardium.

Stottmann RW, Choi M, Mishina Y, Meyers EN, Klingensmith J.

Development. 2004 May;131(9):2205-18. Epub 2004 Apr 8.


The mammalian twisted gastrulation gene functions in foregut and craniofacial development.

Petryk A, Anderson RM, Jarcho MP, Leaf I, Carlson CS, Klingensmith J, Shawlot W, O'Connor MB.

Dev Biol. 2004 Mar 15;267(2):374-86.


Cordon-bleu is a conserved gene involved in neural tube formation.

Carroll EA, Gerrelli D, Gasca S, Berg E, Beier DR, Copp AJ, Klingensmith J.

Dev Biol. 2003 Oct 1;262(1):16-31.


The role of chordin/Bmp signals in mammalian pharyngeal development and DiGeorge syndrome.

Bachiller D, Klingensmith J, Shneyder N, Tran U, Anderson R, Rossant J, De Robertis EM.

Development. 2003 Aug;130(15):3567-78.


Automated three-dimensional assessment of coronary artery anatomy with intravascular ultrasound scanning.

Klingensmith JD, Schoenhagen P, Tajaddini A, Halliburton SS, Tuzcu EM, Nissen SE, Vince DG.

Am Heart J. 2003 May;145(5):795-805. Review.


Two-generation reproductive study in mink fed diisopropyl methylphosphonate (DIMP).

Bucci TJ, Kovatch RM, Mercieca MD, Perman V, Klingensmith JS.

Reprod Toxicol. 2003 May-Jun;17(3):327-34.


Validation of an automated system for luminal and medial-adventitial border detection in three-dimensional intravascular ultrasound.

Klingensmith JD, Tuzcu EM, Nissen SE, Vince DG.

Int J Cardiovasc Imaging. 2003 Apr;19(2):93-104.


Early constriction or expansion of the external elastic membrane area determines the late remodeling response and cumulative lumen loss in transplant vasculopathy: an intravascular ultrasound study with 4-year follow-up.

Tsutsui H, Schoenhagen P, Ziada KM, Crowe TD, Klingensmith JD, Vince DG, Bott-Silverman C, Starling R, Hobbs RE, Young J, Nissen SE, Tuzcu EM.

J Heart Lung Transplant. 2003 May;22(5):519-25.


Influence of coronary pulsation on volumetric intravascular ultrasound measurements performed without ECG-gating. Validation in vessel segments with minimal disease.

Tsutsui H, Schoenhagen P, Crowe TD, Klingensmith JD, Vince DG, Nissen SE, Tuzcu EM.

Int J Cardiovasc Imaging. 2003 Feb;19(1):51-7.


A novel mutation in the gene encoding noggin is not causative in human neural tube defects.

Bauer KA, George TM, Enterline DS, Stottmann RW, Melvin EC, Siegel D, Samal S, Hauser MA, Klingensmith J, Nye JS, Speer MC; Neural Tube Defects Collaborative Group.

J Neurogenet. 2002 Jan-Mar;16(1):65-71.


Chordin and noggin promote organizing centers of forebrain development in the mouse.

Anderson RM, Lawrence AR, Stottmann RW, Bachiller D, Klingensmith J.

Development. 2002 Nov;129(21):4975-87.


The BMP antagonists Chordin and Noggin have essential but redundant roles in mouse mandibular outgrowth.

Stottmann RW, Anderson RM, Klingensmith J.

Dev Biol. 2001 Dec 15;240(2):457-73.


Regression of a donor atheroma after cardiac transplantation: serial observations with intravascular ultrasound.

Tsutsui H, Schoenhagen P, Klingensmith JD, Vince DG, Nissen SE, Tuzcu EM.

Circulation. 2001 Dec 4;104(23):2874. No abstract available.


Lumen loss in transplant coronary artery disease is a biphasic process involving early intimal thickening and late constrictive remodeling: results from a 5-year serial intravascular ultrasound study.

Tsutsui H, Ziada KM, Schoenhagen P, Iyisoy A, Magyar WA, Crowe TD, Klingensmith JD, Vince DG, Rincon G, Hobbs RE, Yamagishi M, Nissen SE, Tuzcu EM.

Circulation. 2001 Aug 7;104(6):653-7.


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