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Items: 28

1.

Evolvix BEST Names for semantic reproducibility across code2brain interfaces.

Loewe L, Scheuer KS, Keel SA, Vyas V, Liblit B, Hanlon B, Ferris MC, Yin J, Dutra I, Pietsch A, Javid CG, Moog CL, Meyer J, Dresel J, McLoone B, Loberger S, Movaghar A, Gilchrist-Scott M, Sabri Y, Sescleifer D, Pereda-Zorrilla I, Zietlow A, Smith R, Pietenpol S, Goldfinger J, Atzen SL, Freiberg E, Waters NP, Nusbaum C, Nolan E, Hotz A, Kliman RM, Mentewab A, Fregien N, Loewe M.

Ann N Y Acad Sci. 2017 Jan;1387(1):124-144. doi: 10.1111/nyas.13192. Epub 2016 Dec 5. Review.

2.

Evidence that natural selection on codon usage in Drosophila pseudoobscura varies across codons.

Kliman RM.

G3 (Bethesda). 2014 Apr 16;4(4):681-92. doi: 10.1534/g3.114.010488. Erratum in: G3 (Bethesda). 2014 Aug;4(8):1565.

3.

Estimation of isolation times of the island species in the Drosophila simulans complex from multilocus DNA sequence data.

McDermott SR, Kliman RM.

PLoS One. 2008 Jun 18;3(6):e2442. doi: 10.1371/journal.pone.0002442.

4.

A new test for selection applied to codon usage in Drosophila simulans and D. mauritiana.

Llopart A, Mabillé A, Peters-Hall JR, Comeron JM, Kliman RM.

J Mol Evol. 2008 Mar;66(3):224-31. doi: 10.1007/s00239-008-9072-x. Epub 2008 Feb 21.

PMID:
18288436
5.

The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations.

Comeron JM, Williford A, Kliman RM.

Heredity (Edinb). 2008 Jan;100(1):19-31. Epub 2007 Sep 19. Review.

6.

Fine-scale crossover rate heterogeneity in Drosophila pseudoobscura.

Cirulli ET, Kliman RM, Noor MA.

J Mol Evol. 2007 Jan;64(1):129-35. Epub 2006 Dec 6.

PMID:
17160365
7.

Unusual usage of AGG and TTG codons in humans and their viruses.

Kliman RM, Bernal CA.

Gene. 2005 Jun 6;352:92-9.

PMID:
15922516
8.

Selection conflicts, gene expression, and codon usage trends in yeast.

Kliman RM, Irving N, Santiago M.

J Mol Evol. 2003 Jul;57(1):98-109.

PMID:
12962310
9.
10.

Variability on the dot chromosome in the Drosophila simulans clade.

Noor MA, Kliman RM.

Genetica. 2003 May;118(1):51-8.

PMID:
12733664
11.

Hidden evolution: progress and limitations in detecting multifarious natural selection.

Johnson NA, Kliman RM.

Genetica. 2002 Apr;114(3):281-91. Review.

PMID:
12206367
12.

Single nucleotide polymorphism seeking long term association with complex disease.

Kirk BW, Feinsod M, Favis R, Kliman RM, Barany F.

Nucleic Acids Res. 2002 Aug 1;30(15):3295-311.

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Differences in (G+C) content between species: a commentary on Forsdyke's "chromosomal viewpoint" of speciation.

Kliman RM, Rogers BT, Noor MA.

J Theor Biol. 2001 Mar 21;209(2):131-40.

PMID:
11401455
16.

Evolutionary history of microsatellites in the obscura group of Drosophila.

Noor MA, Kliman RM, Machado CA.

Mol Biol Evol. 2001 Apr;18(4):551-6.

PMID:
11264406
17.

The population genetics of the origin and divergence of the Drosophila simulans complex species.

Kliman RM, Andolfatto P, Coyne JA, Depaulis F, Kreitman M, Berry AJ, McCarter J, Wakeley J, Hey J.

Genetics. 2000 Dec;156(4):1913-31.

18.

Recent selection on synonymous codon usage in Drosophila.

Kliman RM.

J Mol Evol. 1999 Sep;49(3):343-51.

PMID:
10473775
19.

Mutation pressure, natural selection, and the evolution of base composition in Drosophila.

Akashi H, Kliman RM, Eyre-Walker A.

Genetica. 1998;102-103(1-6):49-60. Review.

PMID:
9720271
20.

Patterns of base composition within the genes of Drosophila melanogaster.

Kliman RM, Eyre-Walker A.

J Mol Evol. 1998 May;46(5):534-41.

PMID:
9545464
21.

USING HITCHHIKING GENES TO STUDY ADAPTATION AND DIVERGENCE DURING SPECIATION WITHIN THE DROSOPHILA MELANOGASTER SPECIES COMPLEX.

Hilton H, Kliman RM, Hey J.

Evolution. 1994 Dec;48(6):1900-1913. doi: 10.1111/j.1558-5646.1994.tb02222.x.

PMID:
28565154
22.
23.

Reduced natural selection associated with low recombination in Drosophila melanogaster.

Kliman RM, Hey J.

Mol Biol Evol. 1993 Nov;10(6):1239-58.

PMID:
8277853
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Genetic analyses of photoresponsiveness in the Djungarian hamster, Phodopus sungorus.

Lynch GR, Lynch CB, Kliman RM.

J Comp Physiol A. 1989 Jan;164(4):475-81.

PMID:
2926693

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