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Items: 39

1.

Stressing Escherichia coli to educate students about research: A CURE to investigate multiple levels of gene regulation.

McDonough J, Goudsouzian LK, Papaj A, Maceli AR, Klepac-Ceraj V, Peterson CN.

Biochem Mol Biol Educ. 2017 Sep;45(5):449-458. doi: 10.1002/bmb.21055. Epub 2017 Apr 13.

PMID:
28407453
2.

Experimental fossilization of mat-forming cyanobacteria in coarse-grained siliciclastic sediments.

Newman SA, Klepac-Ceraj V, Mariotti G, Pruss SB, Watson N, Bosak T.

Geobiology. 2017 Jul;15(4):484-498. doi: 10.1111/gbi.12229. Epub 2017 Feb 11.

PMID:
28188680
3.

Molecular biosignatures reveal common benthic microbial sources of organic matter in ooids and grapestones from Pigeon Cay, The Bahamas.

O'Reilly SS, Mariotti G, Winter AR, Newman SA, Matys ED, McDermott F, Pruss SB, Bosak T, Summons RE, Klepac-Ceraj V.

Geobiology. 2017 Jan;15(1):112-130. doi: 10.1111/gbi.12196. Epub 2016 Jul 4.

PMID:
27378151
4.

Microbiology and ecology are vitally important to premedical curricula.

Smith VH, Rubinstein RJ, Park S, Kelly L, Klepac-Ceraj V.

Evol Med Public Health. 2015 Jul 21;2015(1):179-92. doi: 10.1093/emph/eov014. Review.

5.

Differentiation of salivary bacterial profiles of subjects with periodontitis and dental caries.

Belstrøm D, Fiehn NE, Nielsen CH, Klepac-Ceraj V, Paster BJ, Twetman S, Holmstrup P.

J Oral Microbiol. 2015 Apr 7;7:27429. doi: 10.3402/jom.v7.27429. eCollection 2015.

6.

Beta-diversity metrics of the upper digestive tract microbiome are associated with body mass index.

Lin SW, Freedman ND, Shi J, Gail MH, Vogtmann E, Yu G, Klepac-Ceraj V, Paster BJ, Dye BA, Wang GQ, Wei WQ, Fan JH, Qiao YL, Dawsey SM, Abnet CC.

Obesity (Silver Spring). 2015 Apr;23(4):862-9. doi: 10.1002/oby.21020. Epub 2015 Mar 9.

7.

Association between tobacco use and the upper gastrointestinal microbiome among Chinese men.

Vogtmann E, Flores R, Yu G, Freedman ND, Shi J, Gail MH, Dye BA, Wang GQ, Klepac-Ceraj V, Paster BJ, Wei WQ, Guo HQ, Dawsey SM, Qiao YL, Abnet CC.

Cancer Causes Control. 2015 Apr;26(4):581-8. doi: 10.1007/s10552-015-0535-2. Epub 2015 Feb 21.

8.

Subgingival microbial profiles of Sudanese patients with aggressive periodontitis.

Elabdeen HR, Mustafa M, Hasturk H, Klepac-Ceraj V, Ali RW, Paster BJ, Van Dyke T, Bolstad AI.

J Periodontal Res. 2015 Oct;50(5):674-82. doi: 10.1111/jre.12250. Epub 2014 Dec 9.

9.

The association between the upper digestive tract microbiota by HOMIM and oral health in a population-based study in Linxian, China.

Yu G, Dye BA, Gail MH, Shi J, Klepac-Ceraj V, Paster BJ, Wang GQ, Wei WQ, Fan JH, Qiao YL, Dawsey SM, Freedman ND, Abnet CC.

BMC Public Health. 2014 Oct 27;14:1110. doi: 10.1186/1471-2458-14-1110.

10.

Consumption of atmospheric hydrogen during the life cycle of soil-dwelling actinobacteria.

Meredith LK, Rao D, Bosak T, Klepac-Ceraj V, Tada KR, Hansel CM, Ono S, Prinn RG.

Environ Microbiol Rep. 2014 Jun;6(3):226-38. doi: 10.1111/1758-2229.12116. Epub 2013 Nov 20.

PMID:
24983527
11.

Bacterial profiles of saliva in relation to diet, lifestyle factors, and socioeconomic status.

Belstrøm D, Holmstrup P, Nielsen CH, Kirkby N, Twetman S, Heitmann BL, Klepac-Ceraj V, Paster BJ, Fiehn NE.

J Oral Microbiol. 2014 Apr 1;6. doi: 10.3402/jom.v6.23609. eCollection 2014.

12.

Association between upper digestive tract microbiota and cancer-predisposing states in the esophagus and stomach.

Yu G, Gail MH, Shi J, Klepac-Ceraj V, Paster BJ, Dye BA, Wang GQ, Wei WQ, Fan JH, Qiao YL, Dawsey SM, Freedman ND, Abnet CC.

Cancer Epidemiol Biomarkers Prev. 2014 May;23(5):735-41. doi: 10.1158/1055-9965.EPI-13-0855. Epub 2014 Apr 3.

13.

Altered bacterial profiles in saliva from adults with caries lesions: a case-cohort study.

Belstrøm D, Fiehn NE, Nielsen CH, Holmstrup P, Kirkby N, Klepac-Ceraj V, Paster BJ, Twetman S.

Caries Res. 2014;48(5):368-75. doi: 10.1159/000357502. Epub 2014 Mar 12.

14.

Correlation of Aggregatibacter actinomycetemcomitans detection with clinical/immunoinflammatory profile of localized aggressive periodontitis using a 16S rRNA microarray method: a cross-sectional study.

Gonçalves PF, Klepac-Ceraj V, Huang H, Paster BJ, Aukhil I, Wallet SM, Shaddox LM.

PLoS One. 2013 Dec 23;8(12):e85066. doi: 10.1371/journal.pone.0085066. eCollection 2013.

15.

Differences in bacterial saliva profile between periodontitis patients and a control cohort.

Belstrøm D, Fiehn NE, Nielsen CH, Kirkby N, Twetman S, Klepac-Ceraj V, Paster BJ, Holmstrup P.

J Clin Periodontol. 2014 Feb;41(2):104-12. doi: 10.1111/jcpe.12190. Epub 2013 Dec 4.

PMID:
24303924
16.

The effect of arginine on oral biofilm communities.

Nascimento MM, Browngardt C, Xiaohui X, Klepac-Ceraj V, Paster BJ, Burne RA.

Mol Oral Microbiol. 2014 Feb;29(1):45-54. doi: 10.1111/omi.12044. Epub 2013 Dec 2.

PMID:
24289808
17.

Antimicrobial action of minocycline microspheres versus 810-nm diode laser on human dental plaque microcosm biofilms.

Song X, Yaskell T, Klepac-Ceraj V, Lynch MC, Soukos NS.

J Periodontol. 2014 Feb;85(2):335-42. doi: 10.1902/jop.2013.130007. Epub 2013 Jun 27.

PMID:
23805814
18.

Porphyromonas gingivalis: keeping the pathos out of the biont.

Cugini C, Klepac-Ceraj V, Rackaityte E, Riggs JE, Davey ME.

J Oral Microbiol. 2013;5. doi: 10.3402/jom.v5i0.19804. Epub 2013 Apr 3.

19.

Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity.

Hunter RC, Klepac-Ceraj V, Lorenzi MM, Grotzinger H, Martin TR, Newman DK.

Am J Respir Cell Mol Biol. 2012 Dec;47(6):738-45. doi: 10.1165/rcmb.2012-0088OC. Epub 2012 Aug 3.

PMID:
22865623
20.

Microbiological characterization in children with aggressive periodontitis.

Shaddox LM, Huang H, Lin T, Hou W, Harrison PL, Aukhil I, Walker CB, Klepac-Ceraj V, Paster BJ.

J Dent Res. 2012 Oct;91(10):927-33. Epub 2012 Aug 3.

21.

Cyanobacterial diversity and activity in modern conical microbialites.

Bosak T, Liang B, Wu TD, Templer SP, Evans A, Vali H, Guerquin-Kern JL, Klepac-Ceraj V, Sim MS, Mui J.

Geobiology. 2012 Sep;10(5):384-401. doi: 10.1111/j.1472-4669.2012.00334.x. Epub 2012 Jun 19.

PMID:
22713108
22.

Microbial community succession on developing lesions on human enamel.

Torlakovic L, Klepac-Ceraj V, Ogaard B, Cotton SL, Paster BJ, Olsen I.

J Oral Microbiol. 2012;4. doi: 10.3402/jom.v4i0.16125. Epub 2012 Mar 14.

23.

Microbial diversity under extreme euxinia: Mahoney Lake, Canada.

Klepac-Ceraj V, Hayes CA, Gilhooly WP, Lyons TW, Kolter R, Pearson A.

Geobiology. 2012 May;10(3):223-35. doi: 10.1111/j.1472-4669.2012.00317.x. Epub 2012 Feb 13.

PMID:
22329601
24.

Interspecies interactions that result in Bacillus subtilis forming biofilms are mediated mainly by members of its own genus.

Shank EA, Klepac-Ceraj V, Collado-Torres L, Powers GE, Losick R, Kolter R.

Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):E1236-43. doi: 10.1073/pnas.1103630108. Epub 2011 Nov 10.

25.

Photodynamic effects of methylene blue-loaded polymeric nanoparticles on dental plaque bacteria.

Klepac-Ceraj V, Patel N, Song X, Holewa C, Patel C, Kent R, Amiji MM, Soukos NS.

Lasers Surg Med. 2011 Sep;43(7):600-6. doi: 10.1002/lsm.21069.

26.

In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes.

Bohorquez LC, Delgado-Serrano L, López G, Osorio-Forero C, Klepac-Ceraj V, Kolter R, Junca H, Baena S, Zambrano MM.

Microb Ecol. 2012 Jan;63(1):103-15. doi: 10.1007/s00248-011-9943-3. Epub 2011 Sep 27. Erratum in: Microb Ecol. 2012 Jan;63(1):238.

PMID:
21947461
27.

Endodontic photodynamic therapy ex vivo.

Ng R, Singh F, Papamanou DA, Song X, Patel C, Holewa C, Patel N, Klepac-Ceraj V, Fontana CR, Kent R, Pagonis TC, Stashenko PP, Soukos NS.

J Endod. 2011 Feb;37(2):217-22. doi: 10.1016/j.joen.2010.10.008.

28.

Comparative analyses of the bacterial microbiota of the human nostril and oropharynx.

Lemon KP, Klepac-Ceraj V, Schiffer HK, Brodie EL, Lynch SV, Kolter R.

MBio. 2010 Jun 22;1(3). pii: e00129-10. doi: 10.1128/mBio.00129-10.

29.

Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis.

Guss AM, Roeselers G, Newton IL, Young CR, Klepac-Ceraj V, Lory S, Cavanaugh CM.

ISME J. 2011 Jan;5(1):20-9. doi: 10.1038/ismej.2010.88. Epub 2010 Jul 15.

30.

Taxonomic and functional diversity of atrazine-degrading bacterial communities enriched from agrochemical factory soil.

Udiković-Kolić N, Hršak D, Devers M, Klepac-Ceraj V, Petrić I, Martin-Laurent F.

J Appl Microbiol. 2010 Jul;109(1):355-67. doi: 10.1111/j.1365-2672.2010.04700.x. Epub 2010 Feb 8.

31.

Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa.

Klepac-Ceraj V, Lemon KP, Martin TR, Allgaier M, Kembel SW, Knapp AA, Lory S, Brodie EL, Lynch SV, Bohannan BJ, Green JL, Maurer BA, Kolter R.

Environ Microbiol. 2010 May;12(5):1293-303. doi: 10.1111/j.1462-2920.2010.02173.x. Epub 2010 Feb 23.

PMID:
20192960
32.

Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity.

Hunt DE, Klepac-Ceraj V, Acinas SG, Gautier C, Bertilsson S, Polz MF.

Appl Environ Microbiol. 2006 Mar;72(3):2221-5.

33.

PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample.

Acinas SG, Sarma-Rupavtarm R, Klepac-Ceraj V, Polz MF.

Appl Environ Microbiol. 2005 Dec;71(12):8966-9.

34.

Binding of harvested bacterial exopolymers to the surface of calcite.

Perry TD 4th, Klepac-Ceraj V, Zhang XV, McNamara CJ, Polz MF, Martin ST, Berke N, Mitchell R.

Environ Sci Technol. 2005 Nov 15;39(22):8770-5.

PMID:
16323775
35.

Molecular characterization of sulfate-reducing bacteria in a New England salt marsh.

Bahr M, Crump BC, Klepac-Ceraj V, Teske A, Sogin ML, Hobbie JE.

Environ Microbiol. 2005 Aug;7(8):1175-85.

PMID:
16011754
36.

Genotypic diversity within a natural coastal bacterioplankton population.

Thompson JR, Pacocha S, Pharino C, Klepac-Ceraj V, Hunt DE, Benoit J, Sarma-Rupavtarm R, Distel DL, Polz MF.

Science. 2005 Feb 25;307(5713):1311-3.

37.

Fine-scale phylogenetic architecture of a complex bacterial community.

Acinas SG, Klepac-Ceraj V, Hunt DE, Pharino C, Ceraj I, Distel DL, Polz MF.

Nature. 2004 Jul 29;430(6999):551-4.

PMID:
15282603
38.

High overall diversity and dominance of microdiverse relationships in salt marsh sulphate-reducing bacteria.

Klepac-Ceraj V, Bahr M, Crump BC, Teske AP, Hobbie JE, Polz MF.

Environ Microbiol. 2004 Jul;6(7):686-98.

PMID:
15186347
39.

Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.

Acinas SG, Marcelino LA, Klepac-Ceraj V, Polz MF.

J Bacteriol. 2004 May;186(9):2629-35.

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