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Items: 18

1.

Synthetic hormone-responsive transcription factors can monitor and re-program plant development.

Khakhar A, Leydon AR, Lemmex AC, Klavins E, Nemhauser JL.

Elife. 2018 May 1;7. pii: e34702. doi: 10.7554/eLife.34702.

2.

High-throughput characterization of protein-protein interactions by reprogramming yeast mating.

Younger D, Berger S, Baker D, Klavins E.

Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):12166-12171. doi: 10.1073/pnas.1705867114. Epub 2017 Oct 31.

3.

Synthetic genetic circuits in crop plants.

de Lange O, Klavins E, Nemhauser J.

Curr Opin Biotechnol. 2018 Feb;49:16-22. doi: 10.1016/j.copbio.2017.07.003. Epub 2017 Jul 31. Review.

PMID:
28772191
4.

Digital logic circuits in yeast with CRISPR-dCas9 NOR gates.

Gander MW, Vrana JD, Voje WE, Carothers JM, Klavins E.

Nat Commun. 2017 May 25;8:15459. doi: 10.1038/ncomms15459.

5.

Cell-Cell Communication in Yeast Using Auxin Biosynthesis and Auxin Responsive CRISPR Transcription Factors.

Khakhar A, Bolten NJ, Nemhauser J, Klavins E.

ACS Synth Biol. 2016 Apr 15;5(4):279-86. doi: 10.1021/acssynbio.5b00064. Epub 2015 Jul 6.

PMID:
26102245
6.

Auxin-induced degradation dynamics set the pace for lateral root development.

Guseman JM, Hellmuth A, Lanctot A, Feldman TP, Moss BL, Klavins E, Calderón Villalobos LI, Nemhauser JL.

Development. 2015 Mar 1;142(5):905-9. doi: 10.1242/dev.117234. Epub 2015 Jan 29.

7.

Lightening the load in synthetic biology.

Klavins E.

Nat Biotechnol. 2014 Dec;32(12):1198-200. doi: 10.1038/nbt.3089.

PMID:
25489836
8.

A low cost, customizable turbidostat for use in synthetic circuit characterization.

Takahashi CN, Miller AW, Ekness F, Dunham MJ, Klavins E.

ACS Synth Biol. 2015 Jan 16;4(1):32-8. doi: 10.1021/sb500165g. Epub 2014 Aug 1.

9.

Recapitulation of the forward nuclear auxin response pathway in yeast.

Pierre-Jerome E, Jang SS, Havens KA, Nemhauser JL, Klavins E.

Proc Natl Acad Sci U S A. 2014 Jul 1;111(26):9407-12. doi: 10.1073/pnas.1324147111. Epub 2014 Jun 16.

10.

Framework for engineering finite state machines in gene regulatory networks.

Oishi K, Klavins E.

ACS Synth Biol. 2014 Sep 19;3(9):652-65. doi: 10.1021/sb4001799. Epub 2014 Mar 5.

PMID:
24932713
11.

Specification and simulation of synthetic multicelled behaviors.

Jang SS, Oishi KT, Egbert RG, Klavins E.

ACS Synth Biol. 2012 Aug 17;1(8):365-74. doi: 10.1021/sb300034m. Epub 2012 Jul 31.

PMID:
23651290
12.

Mutations in the TIR1 auxin receptor that increase affinity for auxin/indole-3-acetic acid proteins result in auxin hypersensitivity.

Yu H, Moss BL, Jang SS, Prigge M, Klavins E, Nemhauser JL, Estelle M.

Plant Physiol. 2013 May;162(1):295-303. doi: 10.1104/pp.113.215582. Epub 2013 Mar 28.

13.

Estimation and discrimination of stochastic biochemical circuits from time-lapse microscopy data.

Thorsley D, Klavins E.

PLoS One. 2012;7(11):e47151. doi: 10.1371/journal.pone.0047151. Epub 2012 Nov 6.

14.

Fine-tuning gene networks using simple sequence repeats.

Egbert RG, Klavins E.

Proc Natl Acad Sci U S A. 2012 Oct 16;109(42):16817-22. doi: 10.1073/pnas.1205693109. Epub 2012 Aug 27.

15.

A synthetic approach reveals extensive tunability of auxin signaling.

Havens KA, Guseman JM, Jang SS, Pierre-Jerome E, Bolten N, Klavins E, Nemhauser JL.

Plant Physiol. 2012 Sep;160(1):135-42. doi: 10.1104/pp.112.202184. Epub 2012 Jul 27.

16.

Biomolecular implementation of linear I/O systems.

Oishi K, Klavins E.

IET Syst Biol. 2011 Jul;5(4):252-60. doi: 10.1049/iet-syb.2010.0056.

PMID:
21823756
17.

Approximating stochastic biochemical processes with Wasserstein pseudometrics.

Thorsley D, Klavins E.

IET Syst Biol. 2010 May;4(3):193-211. doi: 10.1049/iet-syb.2009.0039.

PMID:
20500000
18.

An improved autonomous DNA nanomotor.

Bishop JD, Klavins E.

Nano Lett. 2007 Sep;7(9):2574-7. Epub 2007 Jul 26.

PMID:
17655267

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