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Items: 1 to 50 of 118

1.

Influence of Labeling on the Glycan Affinities and Specificities of Glycan-Binding Proteins. A Case Study Involving a C-terminal Fragment of Human Galectin 3.

Kitova EN, Han L, Vinals DF, Kitov PI, Derda R, Klassen JS.

Glycobiology. 2019 Sep 16. pii: cwz076. doi: 10.1093/glycob/cwz076. [Epub ahead of print]

PMID:
31529034
2.

A quantitative, high-throughput method identifies protein-glycan interactions via mass spectrometry.

Kitov PI, Kitova EN, Han L, Li Z, Jung J, Rodrigues E, Hunter CD, Cairo CW, Macauley MS, Klassen JS.

Commun Biol. 2019 Jul 22;2:268. doi: 10.1038/s42003-019-0507-2. eCollection 2019.

3.

Sliding Window Adduct Removal Method (SWARM) for Enhanced Electrospray Ionization Mass Spectrometry Binding Data.

Kitov PI, Han L, Kitova EN, Klassen JS.

J Am Soc Mass Spectrom. 2019 Aug;30(8):1446-1454. doi: 10.1007/s13361-019-02204-8. Epub 2019 Apr 25.

PMID:
31025293
4.

Crystal structures of human lysosomal EPDR1 reveal homology with the superfamily of bacterial lipoprotein transporters.

Wei Y, Xiong ZJ, Li J, Zou C, Cairo CW, Klassen JS, Privé GG.

Commun Biol. 2019 Feb 5;2:52. doi: 10.1038/s42003-018-0262-9. eCollection 2019.

5.

Multipronged ESI-MS Approach for Studying Glycan-Binding Protein Interactions with Glycoproteins.

Wang Y, Park H, Lin H, Kitova EN, Klassen JS.

Anal Chem. 2019 Feb 5;91(3):2140-2147. doi: 10.1021/acs.analchem.8b04673. Epub 2019 Jan 25.

PMID:
30624066
6.

The small RbcS-like domains of the β-carboxysome structural protein CcmM bind RubisCO at a site distinct from that binding the RbcS subunit.

Ryan P, Forrester TJB, Wroblewski C, Kenney TMG, Kitova EN, Klassen JS, Kimber MS.

J Biol Chem. 2019 Feb 22;294(8):2593-2603. doi: 10.1074/jbc.RA118.006330. Epub 2018 Dec 27.

7.

Bioengineered Norovirus S60 Nanoparticles as a Multifunctional Vaccine Platform.

Xia M, Huang P, Sun C, Han L, Vago FS, Li K, Zhong W, Jiang W, Klassen JS, Jiang X, Tan M.

ACS Nano. 2018 Nov 27;12(11):10665-10682. doi: 10.1021/acsnano.8b02776. Epub 2018 Sep 25.

8.

The Peptidisc, a simple method for stabilizing membrane proteins in detergent-free solution.

Carlson ML, Young JW, Zhao Z, Fabre L, Jun D, Li J, Li J, Dhupar HS, Wason I, Mills AT, Beatty JT, Klassen JS, Rouiller I, Duong F.

Elife. 2018 Aug 15;7. pii: e34085. doi: 10.7554/eLife.34085.

9.

Detecting Protein-Glycolipid Interactions Using CaR-ESI-MS and Model Membranes: Comparison of Pre-loaded and Passively Loaded Picodiscs.

Li J, Han L, Li J, Kitova EN, Xiong ZJ, Privé GG, Klassen JS.

J Am Soc Mass Spectrom. 2018 Jul;29(7):1493-1504. doi: 10.1007/s13361-018-1936-8. Epub 2018 Apr 13.

PMID:
29654535
10.

Quantifying the binding stoichiometry and affinity of histo-blood group antigen oligosaccharides for human noroviruses.

Han L, Zheng R, Richards MR, Tan M, Kitova EN, Jiang X, Klassen JS.

Glycobiology. 2018 Jul 1;28(7):488-498. doi: 10.1093/glycob/cwy028.

11.

Synthetic polyprenol-pyrophosphate linked oligosaccharides are efficient substrates for mycobacterial galactan biosynthetic enzymes.

Xue X, Zheng RB, Koizumi A, Han L, Klassen JS, Lowary TL.

Org Biomol Chem. 2018 Mar 14;16(11):1939-1957. doi: 10.1039/c8ob00316e.

PMID:
29492483
12.

Human Neuraminidase Isoenzymes Show Variable Activities for 9- O-Acetyl-sialoside Substrates.

Hunter CD, Khanna N, Richards MR, Rezaei Darestani R, Zou C, Klassen JS, Cairo CW.

ACS Chem Biol. 2018 Apr 20;13(4):922-932. doi: 10.1021/acschembio.7b00952. Epub 2018 Feb 13.

PMID:
29341588
13.

Genetically-encoded fragment-based discovery (GE-FBD) of glycopeptide ligands with differential selectivity for antibodies related to mycobacterial infections.

Chou Y, Kitova EN, Joe M, Brunton R, Lowary TL, Klassen JS, Derda R.

Org Biomol Chem. 2018 Jan 3;16(2):223-227. doi: 10.1039/c7ob02783d.

PMID:
29255817
14.

Screening natural libraries of human milk oligosaccharides against lectins using CaR-ESI-MS.

El-Hawiet A, Chen Y, Shams-Ud-Doha K, Kitova EN, Kitov PI, Bode L, Hage N, Falcone FH, Klassen JS.

Analyst. 2018 Jan 15;143(2):536-548. doi: 10.1039/c7an01397c.

PMID:
29239412
15.

Investigating the Influence of Membrane Composition on Protein-Glycolipid Binding Using Nanodiscs and Proxy Ligand Electrospray Ionization Mass Spectrometry.

Han L, Morales LC, Richards MR, Kitova EN, Sipione S, Klassen JS.

Anal Chem. 2017 Sep 5;89(17):9330-9338. doi: 10.1021/acs.analchem.7b02094. Epub 2017 Aug 17.

PMID:
28768095
16.

High-Throughput Label- and Immobilization-Free Screening of Human Milk Oligosaccharides Against Lectins.

El-Hawiet A, Chen Y, Shams-Ud-Doha K, Kitova EN, St-Pierre Y, Klassen JS.

Anal Chem. 2017 Sep 5;89(17):8713-8722. doi: 10.1021/acs.analchem.7b00542. Epub 2017 Aug 16.

PMID:
28749685
17.

Delivering Transmembrane Peptide Complexes to the Gas Phase Using Nanodiscs and Electrospray Ionization.

Li J, Richards MR, Kitova EN, Klassen JS.

J Am Soc Mass Spectrom. 2017 Oct;28(10):2054-2065. doi: 10.1007/s13361-017-1735-7. Epub 2017 Jul 5.

PMID:
28681358
18.

Human Milk Oligosaccharide Specificities of Human Galectins. Comparison of Electrospray Ionization Mass Spectrometry and Glycan Microarray Screening Results.

Shams-Ud-Doha K, Kitova EN, Kitov PI, St-Pierre Y, Klassen JS.

Anal Chem. 2017 May 2;89(9):4914-4921. doi: 10.1021/acs.analchem.6b05169. Epub 2017 Apr 10.

PMID:
28345865
19.

Optogenetic control with a photocleavable protein, PhoCl.

Zhang W, Lohman AW, Zhuravlova Y, Lu X, Wiens MD, Hoi H, Yaganoglu S, Mohr MA, Kitova EN, Klassen JS, Pantazis P, Thompson RJ, Campbell RE.

Nat Methods. 2017 Apr;14(4):391-394. doi: 10.1038/nmeth.4222. Epub 2017 Mar 13.

PMID:
28288123
20.

Detecting Protein-Glycolipid Interactions Using Glycomicelles and CaR-ESI-MS.

Han L, Kitova EN, Klassen JS.

J Am Soc Mass Spectrom. 2016 Nov;27(11):1878-1886. Epub 2016 Aug 22.

PMID:
27549393
21.

Characterizing the Size and Composition of Saposin A Lipoprotein Picodiscs.

Li J, Richards MR, Bagal D, Campuzano ID, Kitova EN, Xiong ZJ, Privé GG, Klassen JS.

Anal Chem. 2016 Oct 4;88(19):9524-9531. Epub 2016 Sep 13.

PMID:
27532319
22.

Screening Oligosaccharide Libraries against Lectins Using the Proxy Protein Electrospray Ionization Mass Spectrometry Assay.

Han L, Shams-Ud-Doha K, Kitova EN, Klassen JS.

Anal Chem. 2016 Aug 16;88(16):8224-31. doi: 10.1021/acs.analchem.6b02044. Epub 2016 Jul 29.

PMID:
27366913
23.

Structure and Stability of Carbohydrate-Lipid Interactions. Methylmannose Polysaccharide-Fatty Acid Complexes.

Liu L, Siuda I, Richards MR, Renaud J, Kitova EN, Mayer PM, Tieleman DP, Lowary TL, Klassen JS.

Chembiochem. 2016 Aug 17;17(16):1571-8. doi: 10.1002/cbic.201600123. Epub 2016 Jul 13.

PMID:
27253157
24.

Screening Glycolipids Against Proteins in Vitro Using Picodiscs and Catch-and-Release Electrospray Ionization-Mass Spectrometry.

Li J, Fan X, Kitova EN, Zou C, Cairo CW, Eugenio L, Ng KK, Xiong ZJ, Privé GG, Klassen JS.

Anal Chem. 2016 May 3;88(9):4742-50. doi: 10.1021/acs.analchem.6b00043. Epub 2016 Apr 20.

PMID:
27049760
25.

Screening Anti-Cancer Drugs against Tubulin using Catch-and-Release Electrospray Ionization Mass Spectrometry.

Rezaei Darestani R, Winter P, Kitova EN, Tuszynski JA, Klassen JS.

J Am Soc Mass Spectrom. 2016 May;27(5):876-85. doi: 10.1007/s13361-016-1360-x. Epub 2016 Mar 4.

PMID:
26944280
26.

Silent Encoding of Chemical Post-Translational Modifications in Phage-Displayed Libraries.

Tjhung KF, Kitov PI, Ng S, Kitova EN, Deng L, Klassen JS, Derda R.

J Am Chem Soc. 2016 Jan 13;138(1):32-5. doi: 10.1021/jacs.5b10390. Epub 2015 Dec 28.

PMID:
26683999
27.

Influence of Sulfolane on ESI-MS Measurements of Protein-Ligand Affinities.

Yao Y, Richards MR, Kitova EN, Klassen JS.

J Am Soc Mass Spectrom. 2016 Mar;27(3):498-506. doi: 10.1007/s13361-015-1312-x. Epub 2015 Dec 14.

PMID:
26667179
28.

Localizing Carbohydrate Binding Sites in Proteins Using Hydrogen/Deuterium Exchange Mass Spectrometry.

Zhang J, Kitova EN, Li J, Eugenio L, Ng K, Klassen JS.

J Am Soc Mass Spectrom. 2016 Jan;27(1):83-90. doi: 10.1007/s13361-015-1263-2. Epub 2015 Sep 30.

PMID:
26423923
29.

Magnetic field assisted programming of particle shapes and patterns.

Xu W, Yao Y, Klassen JS, Serpe MJ.

Soft Matter. 2015 Sep 28;11(36):7151-8. doi: 10.1039/c5sm01820j. Epub 2015 Aug 10.

PMID:
26256518
30.

Tulane virus recognizes sialic acids as cellular receptors.

Tan M, Wei C, Huang P, Fan Q, Quigley C, Xia M, Fang H, Zhang X, Zhong W, Klassen JS, Jiang X.

Sci Rep. 2015 Jul 6;5:11784. doi: 10.1038/srep11784.

31.

Recognition of human milk oligosaccharides by bacterial exotoxins.

El-Hawiet A, Kitova EN, Klassen JS.

Glycobiology. 2015 Aug;25(8):845-54. doi: 10.1093/glycob/cwv025. Epub 2015 May 4.

PMID:
25941008
32.

Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteins.

Ng S, Lin E, Kitov PI, Tjhung KF, Gerlits OO, Deng L, Kasper B, Sood A, Paschal BM, Zhang P, Ling CC, Klassen JS, Noren CJ, Mahal LK, Woods RJ, Coates L, Derda R.

J Am Chem Soc. 2015 Apr 29;137(16):5248-51. doi: 10.1021/ja511237n. Epub 2015 Apr 16.

33.

Protein-glycolipid interactions studied in vitro using ESI-MS and nanodiscs: insights into the mechanisms and energetics of binding.

Han L, Kitova EN, Li J, Nikjah S, Lin H, Pluvinage B, Boraston AB, Klassen JS.

Anal Chem. 2015;87(9):4888-96. doi: 10.1021/acs.analchem.5b00678. Epub 2015 Apr 23.

PMID:
25859741
34.

Picodiscs for facile protein-glycolipid interaction analysis.

Leney AC, Rezaei Darestani R, Li J, Nikjah S, Kitova EN, Zou C, Cairo CW, Xiong ZJ, Privé GG, Klassen JS.

Anal Chem. 2015 Apr 21;87(8):4402-8. doi: 10.1021/acs.analchem.5b00170. Epub 2015 Apr 9.

PMID:
25803566
35.

Affinities of human histo-blood group antigens for norovirus capsid protein complexes.

Han L, Kitova EN, Tan M, Jiang X, Pluvinage B, Boraston AB, Klassen JS.

Glycobiology. 2015 Feb;25(2):170-80. doi: 10.1093/glycob/cwu100. Epub 2014 Oct 1.

36.

Evaluation of a focused virtual library of heterobifunctional ligands for Clostridium difficile toxins.

Sanhueza CA, Cartmell J, El-Hawiet A, Szpacenko A, Kitova EN, Daneshfar R, Klassen JS, Lang DE, Eugenio L, Ng KK, Kitov PI, Bundle DR.

Org Biomol Chem. 2015 Jan 7;13(1):283-98. doi: 10.1039/c4ob01838a.

PMID:
25367771
37.

Quantifying protein-carbohydrate interactions using liquid sample desorption electrospray ionization mass spectrometry.

Yao Y, Shams-Ud-Doha K, Daneshfar R, Kitova EN, Klassen JS.

J Am Soc Mass Spectrom. 2015 Jan;26(1):98-106. doi: 10.1007/s13361-014-1008-7. Epub 2014 Oct 15.

PMID:
25315460
38.

P. aeruginosa SGNH hydrolase-like proteins AlgJ and AlgX have similar topology but separate and distinct roles in alginate acetylation.

Baker P, Ricer T, Moynihan PJ, Kitova EN, Walvoort MT, Little DJ, Whitney JC, Dawson K, Weadge JT, Robinson H, Ohman DE, Codée JD, Klassen JS, Clarke AJ, Howell PL.

PLoS Pathog. 2014 Aug 28;10(8):e1004334. doi: 10.1371/journal.ppat.1004334. eCollection 2014 Aug.

39.

Screening carbohydrate libraries for protein interactions using the direct ESI-MS assay. Applications to libraries of unknown concentration.

Kitova EN, El-Hawiet A, Klassen JS.

J Am Soc Mass Spectrom. 2014 Nov;25(11):1908-16. doi: 10.1007/s13361-014-0964-2. Epub 2014 Aug 19.

PMID:
25135608
40.

Gangliosides are ligands for human noroviruses.

Han L, Tan M, Xia M, Kitova EN, Jiang X, Klassen JS.

J Am Chem Soc. 2014 Sep 10;136(36):12631-7. doi: 10.1021/ja505272n. Epub 2014 Aug 28.

41.

Nanodiscs and electrospray ionization mass spectrometry: a tool for screening glycolipids against proteins.

Leney AC, Fan X, Kitova EN, Klassen JS.

Anal Chem. 2014 Jun 3;86(11):5271-7. doi: 10.1021/ac4041179. Epub 2014 May 14.

PMID:
24779922
42.

Fluorine bonding enhances the energetics of protein-lipid binding in the gas phase.

Liu L, Jalili N, Baergen A, Ng S, Bailey J, Derda R, Klassen JS.

J Am Soc Mass Spectrom. 2014 May;25(5):751-7.

PMID:
24658801
43.

Energetics of intermolecular hydrogen bonds in a hydrophobic protein cavity.

Liu L, Baergen A, Michelsen K, Kitova EN, Schnier PD, Klassen JS.

J Am Soc Mass Spectrom. 2014 May;25(5):742-50.

PMID:
24658798
44.

Catalytic mechanism and mode of action of the periplasmic alginate epimerase AlgG.

Wolfram F, Kitova EN, Robinson H, Walvoort MT, Codée JD, Klassen JS, Howell PL.

J Biol Chem. 2014 Feb 28;289(9):6006-19. doi: 10.1074/jbc.M113.533158. Epub 2014 Jan 7.

45.

Mycobacteriophage cell binding proteins for the capture of mycobacteria.

Arutyunov D, Singh U, El-Hawiet A, Seckler HD, Nikjah S, Joe M, Bai Y, Lowary TL, Klassen JS, Evoy S, Szymanski CM.

Bacteriophage. 2014 Dec 16;4(4):e960346. eCollection 2014.

46.

Structural basis for antibody recognition in the receptor-binding domains of toxins A and B from Clostridium difficile.

Murase T, Eugenio L, Schorr M, Hussack G, Tanha J, Kitova EN, Klassen JS, Ng KK.

J Biol Chem. 2014 Jan 24;289(4):2331-43. doi: 10.1074/jbc.M113.505917. Epub 2013 Dec 5.

47.

Discovery of light-responsive ligands through screening of a light-responsive genetically encoded library.

Jafari MR, Deng L, Kitov PI, Ng S, Matochko WL, Tjhung KF, Zeberoff A, Elias A, Klassen JS, Derda R.

ACS Chem Biol. 2014 Feb 21;9(2):443-50. doi: 10.1021/cb4006722. Epub 2013 Nov 20.

PMID:
24195775
48.
49.

Identifying carbohydrate ligands of a norovirus P particle using a catch and release electrospray ionization mass spectrometry assay.

Han L, Kitova EN, Tan M, Jiang X, Klassen JS.

J Am Soc Mass Spectrom. 2014 Jan;25(1):111-9. doi: 10.1007/s13361-013-0752-4. Epub 2013 Oct 5.

PMID:
24096878
50.

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