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Items: 34

1.

Reply from Kirn and Sharp to Brecher, 'EUCAST and CLSI Point-Counterpoint on Susceptibility Breakpoints: Do Two "I Agree"s Miss the Point?'

Kirn TJ, Sharp SE.

J Clin Microbiol. 2019 Dec 23;58(1). pii: e01521-19. doi: 10.1128/JCM.01521-19. Print 2019 Dec 23. No abstract available.

PMID:
31871060
2.

Correction for Kraft et al., "A Laboratory Medicine Best Practices Systematic Review and Meta-analysis of Nucleic Acid Amplification Tests (NAATs) and Algorithms Including NAATs for the Diagnosis of Clostridioides (Clostridium) difficile in Adults".

Kraft CS, Parrott JS, Cornish NE, Rubinstein ML, Weissfeld AS, McNult P, Nachamkin I, Humphries RM, Kirn TJ, Dien Bard J, Lutgring JD, Gullett JC, Bittencourt CE, Benson S, Bobenchik AM, Sautter RL, Baselski V, Atlas MC, Marlowe EM, Miller NS, Fischer M, Richter SS, Gilligan P, Snyder JW.

Clin Microbiol Rev. 2019 Aug 28;32(4). pii: e00128-19. doi: 10.1128/CMR.00128-19. Print 2019 Sep 18. No abstract available.

3.
4.

A Laboratory Medicine Best Practices Systematic Review and Meta-analysis of Nucleic Acid Amplification Tests (NAATs) and Algorithms Including NAATs for the Diagnosis of Clostridioides (Clostridium) difficile in Adults.

Kraft CS, Parrott JS, Cornish NE, Rubinstein ML, Weissfeld AS, McNult P, Nachamkin I, Humphries RM, Kirn TJ, Dien Bard J, Lutgring JD, Gullett JC, Bittencourt CE, Benson S, Bobenchik AM, Sautter RL, Baselski V, Atlas MC, Marlowe EM, Miller NS, Fischer M, Richter SS, Gilligan P, Snyder JW.

Clin Microbiol Rev. 2019 May 29;32(3). pii: e00032-18. doi: 10.1128/CMR.00032-18. Print 2019 Jun 19. Erratum in: Clin Microbiol Rev. 2019 Aug 28;32(4):.

5.

Collaboration between an antimicrobial stewardship team and the microbiology laboratory can shorten time to directed antibiotic therapy for methicillin-susceptible staphylococcal bacteremia and to discontinuation of antibiotics for coagulase-negative staphylococcal contaminants.

Bhowmick T, Kirn TJ, Hetherington F, Takavarasha S, Sandhu SS, Gandhi S, Narayanan N, Weinstein MP.

Diagn Microbiol Infect Dis. 2018 Nov;92(3):214-219. doi: 10.1016/j.diagmicrobio.2018.05.020. Epub 2018 May 29.

PMID:
29983288
6.

Assessing Clinical Microbiology Practice Guidelines: American Society for Microbiology Ad Hoc Committee on Evidence-Based Laboratory Medicine Practice Guidelines Assessment.

Nachamkin I, Kirn TJ, Westblade LF, Humphries R.

J Clin Microbiol. 2017 Nov;55(11):3183-3193. doi: 10.1128/JCM.01124-17. Epub 2017 Aug 23. Review.

7.

Automatic Digital Plate Reading for Surveillance Cultures.

Kirn TJ.

J Clin Microbiol. 2016 Oct;54(10):2424-6. doi: 10.1128/JCM.01279-16. Epub 2016 Aug 10.

8.

Point-Counterpoint: A Nucleic Acid Amplification Test for Streptococcus pyogenes Should Replace Antigen Detection and Culture for Detection of Bacterial Pharyngitis.

Pritt BS, Patel R, Kirn TJ, Thomson RB Jr.

J Clin Microbiol. 2016 Oct;54(10):2413-9. doi: 10.1128/JCM.01472-16. Epub 2016 Jul 20.

9.

Erratum for Cheruvanky et al., Cost-Effectiveness of 30- Compared to 20-Milliliter Blood Cultures: a Retrospective Study.

Cheruvanky A, Kirn TJ, Weinstein MP.

J Clin Microbiol. 2016 Mar;54(3):821. doi: 10.1128/JCM.00004-16. No abstract available.

10.

Cost-Effectiveness of 30- Compared to 20-Milliliter Blood Cultures: a Retrospective Study.

Cheruvanky A, Kirn TJ, Weinstein MP.

J Clin Microbiol. 2016 Jan;54(1):64-7. doi: 10.1128/JCM.02024-15. Epub 2015 Oct 21. Erratum in: J Clin Microbiol. 2016 Mar;54(3):821.

11.

Air pollution particulate matter alters antimycobacterial respiratory epithelium innate immunity.

Rivas-Santiago CE, Sarkar S, Cantarella P 4th, Osornio-Vargas Á, Quintana-Belmares R, Meng Q, Kirn TJ, Ohman Strickland P, Chow JC, Watson JG, Torres M, Schwander S.

Infect Immun. 2015 Jun;83(6):2507-17. doi: 10.1128/IAI.03018-14. Epub 2015 Apr 6.

12.

Serotype 10A in case patients with invasive pneumococcal disease: a pilot study of PCR-based serotyping in New Jersey.

Pitts SI, Apostolou A, DasGupta S, Delgado N, Kirn TJ, Montana B, Tan C, McHugh LA.

Public Health Rep. 2015 Jan-Feb;130(1):54-9.

13.

Systematic evaluation of commercial susceptibility testing methods for determining the in vitro activity of daptomycin versus Staphylococcus aureus and Enterococci.

Kirn TJ, Onyeaso E, Syed M, Weinstein MP.

J Clin Microbiol. 2014 Jun;52(6):1877-82. doi: 10.1128/JCM.03439-13. Epub 2014 Mar 19.

14.

Controlled clinical comparison of BacT/alert FA plus and FN plus blood culture media with BacT/alert FA and FN blood culture media.

Kirn TJ, Mirrett S, Reller LB, Weinstein MP.

J Clin Microbiol. 2014 Mar;52(3):839-43. doi: 10.1128/JCM.03063-13. Epub 2013 Dec 26.

15.

Laboratory diagnosis of HIV in adults: a review of current methods.

Cornett JK, Kirn TJ.

Clin Infect Dis. 2013 Sep;57(5):712-8. doi: 10.1093/cid/cit281. Epub 2013 May 10. Review.

PMID:
23667267
16.

Update on blood cultures: how to obtain, process, report, and interpret.

Kirn TJ, Weinstein MP.

Clin Microbiol Infect. 2013 Jun;19(6):513-20. doi: 10.1111/1469-0691.12180. Epub 2013 Mar 13. Review.

17.

Controlled multicenter evaluation of a bacteriophage-based method for rapid detection of Staphylococcus aureus in positive blood cultures.

Bhowmick T, Mirrett S, Reller LB, Price C, Qi C, Weinstein MP, Kirn TJ.

J Clin Microbiol. 2013 Apr;51(4):1226-30. doi: 10.1128/JCM.02967-12. Epub 2013 Feb 6.

18.

Clostridium difficile MazF toxin exhibits selective, not global, mRNA cleavage.

Rothenbacher FP, Suzuki M, Hurley JM, Montville TJ, Kirn TJ, Ouyang M, Woychik NA.

J Bacteriol. 2012 Jul;194(13):3464-74. doi: 10.1128/JB.00217-12. Epub 2012 Apr 27.

19.

Mycobacterium chelonae-abscessus complex associated with sinopulmonary disease, Northeastern USA.

Simmon KE, Brown-Elliott BA, Ridge PG, Durtschi JD, Mann LB, Slechta ES, Steigerwalt AG, Moser BD, Whitney AM, Brown JM, Voelkerding KV, McGowan KL, Reilly AF, Kirn TJ, Butler WR, Edelstein PH, Wallace RJ Jr, Petti CA.

Emerg Infect Dis. 2011 Sep;17(9):1692-700. doi: 10.3201/eid1709.101667.

20.

Effective utilization of evolving methods for the laboratory diagnosis of Clostridium difficile infection.

Kufelnicka AM, Kirn TJ.

Clin Infect Dis. 2011 Jun 15;52(12):1451-7. doi: 10.1093/cid/cir201. Review.

PMID:
21628487
21.

Pathological versus protective functions of IL-22 in airway inflammation are regulated by IL-17A.

Sonnenberg GF, Nair MG, Kirn TJ, Zaph C, Fouser LA, Artis D.

J Exp Med. 2010 Jun 7;207(6):1293-305. doi: 10.1084/jem.20092054. Epub 2010 May 24.

22.

Role of FlgT in anchoring the flagellum of Vibrio cholerae.

Martinez RM, Jude BA, Kirn TJ, Skorupski K, Taylor RK.

J Bacteriol. 2010 Apr;192(8):2085-92. doi: 10.1128/JB.01562-09. Epub 2010 Feb 12.

23.

Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis.

Hill DA, Hoffmann C, Abt MC, Du Y, Kobuley D, Kirn TJ, Bushman FD, Artis D.

Mucosal Immunol. 2010 Mar;3(2):148-58. doi: 10.1038/mi.2009.132. Epub 2009 Nov 25.

24.

Chemiluminescence-based detection of gastrointestinal malignancies.

Park JY, Kirn TJ, Artis D, Waldman SA, Kricka LJ.

Luminescence. 2010 Nov-Dec;25(6):463-5. doi: 10.1002/bio.1173. Epub 2009 Oct 13.

PMID:
19827005
25.

Characterization of two outer membrane proteins, FlgO and FlgP, that influence vibrio cholerae motility.

Martinez RM, Dharmasena MN, Kirn TJ, Taylor RK.

J Bacteriol. 2009 Sep;191(18):5669-79. doi: 10.1128/JB.00632-09. Epub 2009 Jul 10.

26.

Genetic mapping of secretion and functional determinants of the Vibrio cholerae TcpF colonization factor.

Krebs SJ, Kirn TJ, Taylor RK.

J Bacteriol. 2009 Jun;191(11):3665-76. doi: 10.1128/JB.01724-08. Epub 2009 Mar 20.

27.

Peripheral T-cell lymphoma presenting as sclerouveitis.

Kirn TJ, Levy NB, Gosselin JJ, Rosen WJ, Zegans ME.

Cornea. 2007 Oct;26(9):1147-9.

PMID:
17893556
28.

Progress towards development of a cholera subunit vaccine.

Taylor RK, Kirn TJ, Bose N, Stonehouse E, Tripathi SA, Kovác P, Wade WF.

Chem Biodivers. 2004 Jul;1(7):1036-57. Review.

PMID:
17191897
29.

A colonization factor links Vibrio cholerae environmental survival and human infection.

Kirn TJ, Jude BA, Taylor RK.

Nature. 2005 Dec 8;438(7069):863-6.

PMID:
16341015
32.

Use of in vivo-induced antigen technology (IVIAT) to identify genes uniquely expressed during human infection with Vibrio cholerae.

Hang L, John M, Asaduzzaman M, Bridges EA, Vanderspurt C, Kirn TJ, Taylor RK, Hillman JD, Progulske-Fox A, Handfield M, Ryan ET, Calderwood SB.

Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8508-13. Epub 2003 Jun 25.

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